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Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T.).
Reeve, Wayne; Ardley, Julie; Tian, Rui; De Meyer, Sofie; Terpolilli, Jason; Melino, Vanessa; Tiwari, Ravi; Yates, Ronald; O'Hara, Graham; Howieson, John; Ninawi, Mohamed; Zhang, Xiaojing; Bruce, David; Detter, Chris; Tapia, Roxanne; Han, Cliff; Wei, Chia-Lin; Huntemann, Marcel; Han, James; Chen, I-Min; Mavromatis, Konstantinos; Markowitz, Victor; Szeto, Ernest; Ivanova, Natalia; Pagani, Ioanna; Pati, Amrita; Goodwin, Lynne; Woyke, Tanja; Kyrpides, Nikos.
Affiliation
  • Reeve W; Centre for Rhizobium Studies, Murdoch University, Western Australia, Australia.
  • Ardley J; Centre for Rhizobium Studies, Murdoch University, Western Australia, Australia.
  • Tian R; Centre for Rhizobium Studies, Murdoch University, Western Australia, Australia.
  • De Meyer S; Centre for Rhizobium Studies, Murdoch University, Western Australia, Australia.
  • Terpolilli J; Centre for Rhizobium Studies, Murdoch University, Western Australia, Australia.
  • Melino V; Centre for Rhizobium Studies, Murdoch University, Western Australia, Australia.
  • Tiwari R; Centre for Rhizobium Studies, Murdoch University, Western Australia, Australia.
  • Yates R; Centre for Rhizobium Studies, Murdoch University, Western Australia, Australia ; Department of Agriculture and Food, Western Australia, Australia.
  • O'Hara G; Centre for Rhizobium Studies, Murdoch University, Western Australia, Australia.
  • Howieson J; Centre for Rhizobium Studies, Murdoch University, Western Australia, Australia.
  • Ninawi M; Centre for Rhizobium Studies, Murdoch University, Western Australia, Australia.
  • Zhang X; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
  • Bruce D; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Detter C; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Tapia R; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Han C; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Wei CL; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Huntemann M; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Han J; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Chen IM; Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
  • Mavromatis K; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Markowitz V; Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
  • Szeto E; Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
  • Ivanova N; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Pagani I; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Pati A; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Goodwin L; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
  • Woyke T; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Kyrpides N; DOE Joint Genome Institute, Walnut Creek, California, USA.
Stand Genomic Sci ; 9(3): 540-50, 2014 Jun 15.
Article in En | MEDLINE | ID: mdl-25197439
Microvirga lotononidis is a recently described species of root-nodule bacteria that is an effective nitrogen- (N2) fixing microsymbiont of the symbiotically specific African legume Listia angolensis (Welw. ex Bak.) B.-E. van Wyk & Boatwr. M. lotononidis possesses several properties that are unusual in root-nodule bacteria, including pigmentation and the ability to grow at temperatures of up to 45°C. Strain WSM3557(T) is an aerobic, motile, Gram-negative, non-spore-forming rod isolated from a L. angolensis root nodule collected in Chipata, Zambia in 1963. This is the first report of a complete genome sequence for the genus Microvirga. Here we describe the features of Microvirga lotononidis strain WSM3557(T), together with genome sequence information and annotation. The 7,082,538 high-quality-draft genome is arranged in 18 scaffolds of 104 contigs, contains 6,956 protein-coding genes and 84 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program.
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Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Stand Genomic Sci Year: 2014 Document type: Article Affiliation country: Country of publication:
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Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Stand Genomic Sci Year: 2014 Document type: Article Affiliation country: Country of publication: