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Identification of Novel Death-Associated Protein Kinase 2 Interaction Partners by Proteomic Screening Coupled with Bimolecular Fluorescence Complementation.
Geering, Barbara; Zokouri, Zina; Hürlemann, Samuel; Gerrits, Bertran; Ausländer, David; Britschgi, Adrian; Tschan, Mario P; Simon, Hans-Uwe; Fussenegger, Martin.
Affiliation
  • Geering B; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland barbara.geering@bsse.ethz.ch.
  • Zokouri Z; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.
  • Hürlemann S; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.
  • Gerrits B; Functional Genomics Center Zurich, ETH Zurich, Zurich, Switzerland.
  • Ausländer D; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.
  • Britschgi A; Institute of Pathology, University of Bern, Bern, Switzerland.
  • Tschan MP; Institute of Pathology, University of Bern, Bern, Switzerland.
  • Simon HU; Institute of Pharmacology, University of Bern, Bern, Switzerland.
  • Fussenegger M; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland Faculty of Science, University of Basel, Basel, Switzerland.
Mol Cell Biol ; 36(1): 132-43, 2016 Jan 01.
Article in En | MEDLINE | ID: mdl-26483415
ABSTRACT
Death-associated protein kinase 2 (DAPK2) is a Ca(2+)/calmodulin-dependent Ser/Thr kinase that possesses tumor-suppressive functions and regulates programmed cell death, autophagy, oxidative stress, hematopoiesis, and motility. As only few binding partners of DAPK2 have been determined, the molecular mechanisms governing these biological functions are largely unknown. We report the identification of 180 potential DAPK2 interaction partners by affinity purification-coupled mass spectrometry, 12 of which are known DAPK binding proteins. A small subset of established and potential binding proteins detected in this screen was further investigated by bimolecular fluorescence complementation (BiFC) assays, a method to visualize protein interactions in living cells. These experiments revealed that α-actinin-1 and 14-3-3-ß are novel DAPK2 binding partners. The interaction of DAPK2 with α-actinin-1 was localized at the plasma membrane, resulting in massive membrane blebbing and reduced cellular motility, whereas the interaction of DAPK2 with 14-3-3-ß was localized to the cytoplasm, with no impact on blebbing, motility, or viability. Our results therefore suggest that DAPK2 effector functions are influenced by the protein's subcellular localization and highlight the utility of combining mass spectrometry screening with bimolecular fluorescence complementation to identify and characterize novel protein-protein interactions.
Subject(s)

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Apoptosis / Proteomics / Death-Associated Protein Kinases / Fluorescence Type of study: Diagnostic_studies / Risk_factors_studies / Screening_studies Limits: Humans Language: En Journal: Mol Cell Biol Year: 2016 Document type: Article Affiliation country: Publication country: EEUU / ESTADOS UNIDOS / ESTADOS UNIDOS DA AMERICA / EUA / UNITED STATES / UNITED STATES OF AMERICA / US / USA

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Apoptosis / Proteomics / Death-Associated Protein Kinases / Fluorescence Type of study: Diagnostic_studies / Risk_factors_studies / Screening_studies Limits: Humans Language: En Journal: Mol Cell Biol Year: 2016 Document type: Article Affiliation country: Publication country: EEUU / ESTADOS UNIDOS / ESTADOS UNIDOS DA AMERICA / EUA / UNITED STATES / UNITED STATES OF AMERICA / US / USA