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Towards standards for human fecal sample processing in metagenomic studies.
Costea, Paul I; Zeller, Georg; Sunagawa, Shinichi; Pelletier, Eric; Alberti, Adriana; Levenez, Florence; Tramontano, Melanie; Driessen, Marja; Hercog, Rajna; Jung, Ferris-Elias; Kultima, Jens Roat; Hayward, Matthew R; Coelho, Luis Pedro; Allen-Vercoe, Emma; Bertrand, Laurie; Blaut, Michael; Brown, Jillian R M; Carton, Thomas; Cools-Portier, Stéphanie; Daigneault, Michelle; Derrien, Muriel; Druesne, Anne; de Vos, Willem M; Finlay, B Brett; Flint, Harry J; Guarner, Francisco; Hattori, Masahira; Heilig, Hans; Luna, Ruth Ann; van Hylckama Vlieg, Johan; Junick, Jana; Klymiuk, Ingeborg; Langella, Philippe; Le Chatelier, Emmanuelle; Mai, Volker; Manichanh, Chaysavanh; Martin, Jennifer C; Mery, Clémentine; Morita, Hidetoshi; O'Toole, Paul W; Orvain, Céline; Patil, Kiran Raosaheb; Penders, John; Persson, Søren; Pons, Nicolas; Popova, Milena; Salonen, Anne; Saulnier, Delphine; Scott, Karen P; Singh, Bhagirath.
Affiliation
  • Costea PI; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany.
  • Zeller G; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany.
  • Sunagawa S; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany.
  • Pelletier E; Department of Biology, Institute of Microbiology, ETH Zurich, Zurich, Switzerland.
  • Alberti A; CEA - Institut François Jacob - Genoscope, Evry, France.
  • Levenez F; CNRS UMR-8030, Evry, France.
  • Tramontano M; Université Evry Val d'Essonne, Evry, France.
  • Driessen M; CEA - Institut François Jacob - Genoscope, Evry, France.
  • Hercog R; Metagenopolis, Institut National de la Recherche Agronomique, Jouy en Josas, France.
  • Jung FE; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany.
  • Kultima JR; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany.
  • Hayward MR; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany.
  • Coelho LP; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany.
  • Allen-Vercoe E; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany.
  • Bertrand L; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany.
  • Blaut M; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany.
  • Brown JRM; Department of Molecular and Cellular Biology, The University of Guelph, Guelph, Ontario, Canada.
  • Carton T; CEA - Institut François Jacob - Genoscope, Evry, France.
  • Cools-Portier S; Department of Gastrointestinal Microbiology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany.
  • Daigneault M; School of Microbiology & APC Microbiome Institute, University College Cork, Cork, Ireland.
  • Derrien M; Biofortis, Mérieux NutriSciences, Nantes, France.
  • Druesne A; Danone Nutricia Research, Palaiseau, France.
  • de Vos WM; Metagenopolis, Institut National de la Recherche Agronomique, Jouy en Josas, France.
  • Finlay BB; Danone Nutricia Research, Palaiseau, France.
  • Flint HJ; Danone Nutricia Research, Palaiseau, France.
  • Guarner F; Laboratory of Microbiology, Wageningen University & Research, Wageningen, the Netherlands.
  • Hattori M; Immunobiology Research Program, Department of Bacteriology and Immunology, University of Helsinki, Helsinki, Finland.
  • Heilig H; Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada.
  • Luna RA; Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK.
  • van Hylckama Vlieg J; Digestive System Research Unit, Vall d'Hebron Research Institute, Barcelona, Spain.
  • Junick J; Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan.
  • Klymiuk I; Graduate School of Advanced Science and Engineering, Waseda University, Tokyo, Japan.
  • Langella P; Laboratory of Microbiology, Wageningen University & Research, Wageningen, the Netherlands.
  • Le Chatelier E; Texas Children's Hospital, Feigin Center, Houston, Texas, USA.
  • Mai V; Danone Nutricia Research, Palaiseau, France.
  • Manichanh C; Department of Gastrointestinal Microbiology, German Institute of Human Nutrition Potsdam-Rehbruecke, Nuthetal, Germany.
  • Martin JC; Center for Medical Research, Medical University of Graz, Graz, Austria.
  • Mery C; Metagenopolis, Institut National de la Recherche Agronomique, Jouy en Josas, France.
  • Morita H; Metagenopolis, Institut National de la Recherche Agronomique, Jouy en Josas, France.
  • O'Toole PW; Department of Epidemiology, College of Public Health and Health Professions and College of Medicine, Emerging Pathogens Institute, University of Florida, Gainesville, Florida, USA.
  • Orvain C; Digestive System Research Unit, Vall d'Hebron Research Institute, Barcelona, Spain.
  • Patil KR; Rowett Institute of Nutrition and Health, University of Aberdeen, Aberdeen, UK.
  • Penders J; Biofortis, Mérieux NutriSciences, Nantes, France.
  • Persson S; Graduate School of Environmental and Life Science, Okayama University, Okayama, Japan.
  • Pons N; School of Microbiology & APC Microbiome Institute, University College Cork, Cork, Ireland.
  • Popova M; CEA - Institut François Jacob - Genoscope, Evry, France.
  • Salonen A; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany.
  • Saulnier D; School of Nutrition and Translational Research in Metabolism (NUTRIM) and Care and Public Health Research Institute (Caphri), Department of Medical Microbiology, Maastricht University Medical Center, Maastricht, the Netherlands.
  • Scott KP; Unit of Foodborne Infections, Department of Bacteria, Parasites & Fungi, Statens Serum Institut, Copenhagen, Denmark.
  • Singh B; Metagenopolis, Institut National de la Recherche Agronomique, Jouy en Josas, France.
Nat Biotechnol ; 35(11): 1069-1076, 2017 Nov.
Article in En | MEDLINE | ID: mdl-28967887
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: DNA / Feces / Metagenomics / Chemical Fractionation Limits: Humans Language: En Journal: Nat Biotechnol Journal subject: BIOTECNOLOGIA Year: 2017 Document type: Article Affiliation country:
Fulltext
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: DNA / Feces / Metagenomics / Chemical Fractionation Limits: Humans Language: En Journal: Nat Biotechnol Journal subject: BIOTECNOLOGIA Year: 2017 Document type: Article Affiliation country: