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A novel autophagy-related lncRNA survival model for lung adenocarcinoma.
Wu, Liwei; Wen, Zilu; Song, Yanzheng; Wang, Lin.
Affiliation
  • Wu L; Department of Thoracic Surgery, Shanghai Public Health Clinical Center, Fudan University, Shanghai, China.
  • Wen Z; Department of Scientific Research, Shanghai Public Health Clinical Center, Fudan University, Shanghai, China.
  • Song Y; Department of Thoracic Surgery, Shanghai Public Health Clinical Center, Fudan University, Shanghai, China.
  • Wang L; TB Center, Shanghai Emerging & Re-emerging Infectious Diseases Institute, Shanghai, China.
J Cell Mol Med ; 25(12): 5681-5690, 2021 06.
Article in En | MEDLINE | ID: mdl-33987935
Long non-coding RNA (lncRNA) is an important regulatory factor in the development of lung adenocarcinoma, which is related to the control of autophagy. LncRNA can also be used as a biomarker of prognosis in patients with lung adenocarcinoma. Therefore, it is important to determine the prognostic value of autophagy-related lncRNA in lung adenocarcinoma. In this study, autophagy-related mRNAs-lncRNAs were screened from lung adenocarcinoma and a co-expression network of autophagy-related mRNAs-lncRNAs was constructed by using The Cancer Genome Atlas (TCGA). The univariate and multivariate Cox proportional hazard analyses were used to evaluate the prognostic value of the autophagy-related lncRNAs and finally obtained a survival model composed of 11 autophagy-related lncRNAs. Through Kaplan-Meier analysis, univariate and multivariate Cox regression analysis and time-dependent receiver operating characteristic (ROC) curve analysis, it was further verified that the survival model was a new independent prognostic factor for patients with lung adenocarcinoma. In addition, based on the survival model, gene set enrichment analysis (GSEA) was used to illustrate the function of genes in low-risk and high-risk groups. These 11 lncRNAs were GAS6-AS1, AC106047.1, AC010980.2, AL034397.3, NKILA, AL606489.1, HLA-DQB1-AS1, LINC01116, LINC01806, FAM83A-AS1 and AC090559.1. The hazard ratio (HR) of the risk score was 1.256 (1.196-1.320) (P < .001) in univariate Cox regression analysis and 1.215 (1.149-1.286) (P < .001) in multivariate Cox regression analysis. And the AUC value of the risk score was 0.809. The 11 autophagy-related lncRNA survival models had important predictive value for the prognosis of lung adenocarcinoma and may become clinical autophagy-related therapeutic targets.
Subject(s)
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Autophagy / Biomarkers, Tumor / Gene Expression Regulation, Neoplastic / RNA, Long Noncoding / Autophagy-Related Proteins / Adenocarcinoma of Lung / Lung Neoplasms Type of study: Prognostic_studies Limits: Humans Language: En Journal: J Cell Mol Med Journal subject: BIOLOGIA MOLECULAR Year: 2021 Document type: Article Affiliation country: Country of publication:

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Autophagy / Biomarkers, Tumor / Gene Expression Regulation, Neoplastic / RNA, Long Noncoding / Autophagy-Related Proteins / Adenocarcinoma of Lung / Lung Neoplasms Type of study: Prognostic_studies Limits: Humans Language: En Journal: J Cell Mol Med Journal subject: BIOLOGIA MOLECULAR Year: 2021 Document type: Article Affiliation country: Country of publication: