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Hi-C scaffolded short- and long-read genome assemblies of the California sea lion are broadly consistent for syntenic inference across 45 million years of evolution.
Peart, Claire R; Williams, Christina; Pophaly, Saurabh D; Neely, Benjamin A; Gulland, Frances M D; Adams, David J; Ng, Bee Ling; Cheng, William; Goebel, Michael E; Fedrigo, Olivier; Haase, Bettina; Mountcastle, Jacquelyn; Fungtammasan, Arkarachai; Formenti, Giulio; Collins, Joanna; Wood, Jonathan; Sims, Ying; Torrance, James; Tracey, Alan; Howe, Kerstin; Rhie, Arang; Hoffman, Joseph I; Johnson, Jeremy; Jarvis, Erich D; Breen, Matthew; Wolf, Jochen B W.
Affiliation
  • Peart CR; Division of Evolutionary Biology, Faculty of Biology, LMU Munich, München, Germany.
  • Williams C; Department of Molecular Biomedical Sciences, College of Veterinary Medicine, North Carolina State University, Raleigh, North Carolina, USA.
  • Pophaly SD; Division of Evolutionary Biology, Faculty of Biology, LMU Munich, München, Germany.
  • Neely BA; Max Planck Institute for Plant Breeding Research, Cologne, Germany.
  • Gulland FMD; National Institute of Standards and Technology, NIST Charleston, Charleston, South Carolina, USA.
  • Adams DJ; Karen Dryer Wildlife Health Center, University of California Davis, Davis, California, USA.
  • Ng BL; Cytometry Core Facility, Wellcome Sanger Institute, Cambridge, UK.
  • Cheng W; Cytometry Core Facility, Wellcome Sanger Institute, Cambridge, UK.
  • Goebel ME; Cytometry Core Facility, Wellcome Sanger Institute, Cambridge, UK.
  • Fedrigo O; Institute of Marine Science, University of California Santa Cruz, Santa Cruz, California, USA.
  • Haase B; Vertebrate Genome Lab, The Rockefeller University, New York City, New York, USA.
  • Mountcastle J; Vertebrate Genome Lab, The Rockefeller University, New York City, New York, USA.
  • Fungtammasan A; Vertebrate Genome Lab, The Rockefeller University, New York City, New York, USA.
  • Formenti G; DNAnexus Inc, Mountain View, California, USA.
  • Collins J; Vertebrate Genome Lab, The Rockefeller University, New York City, New York, USA.
  • Wood J; Laboratory of Neurogenetics of Language, The Rockefeller University, New York City, New York, USA.
  • Sims Y; Tree of Life Programme, Wellcome Sanger Institute, Cambridge, UK.
  • Torrance J; Tree of Life Programme, Wellcome Sanger Institute, Cambridge, UK.
  • Tracey A; Tree of Life Programme, Wellcome Sanger Institute, Cambridge, UK.
  • Howe K; Tree of Life Programme, Wellcome Sanger Institute, Cambridge, UK.
  • Rhie A; Tree of Life Programme, Wellcome Sanger Institute, Cambridge, UK.
  • Hoffman JI; Tree of Life Programme, Wellcome Sanger Institute, Cambridge, UK.
  • Johnson J; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, NIH, Bethesda, Maryland, USA.
  • Jarvis ED; Department of Animal Behaviour, Bielefeld University, Bielefeld, Germany.
  • Breen M; British Antarctic Survey, Cambridge, UK.
  • Wolf JBW; Broad Institute of Harvard and Massachusetts Institute of Technology (MIT), Cambridge, Massachusetts, USA.
Mol Ecol Resour ; 21(7): 2455-2470, 2021 Oct.
Article in En | MEDLINE | ID: mdl-34097816
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Sea Lions Limits: Animals Language: En Journal: Mol Ecol Resour Year: 2021 Document type: Article Affiliation country: Country of publication:
Fulltext
Add to My VHL
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Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Sea Lions Limits: Animals Language: En Journal: Mol Ecol Resour Year: 2021 Document type: Article Affiliation country: Country of publication: