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Identifying general reaction conditions by bandit optimization.
Wang, Jason Y; Stevens, Jason M; Kariofillis, Stavros K; Tom, Mai-Jan; Golden, Dung L; Li, Jun; Tabora, Jose E; Parasram, Marvin; Shields, Benjamin J; Primer, David N; Hao, Bo; Del Valle, David; DiSomma, Stacey; Furman, Ariel; Zipp, G Greg; Melnikov, Sergey; Paulson, James; Doyle, Abigail G.
Affiliation
  • Wang JY; Department of Chemistry, Princeton University, Princeton, NJ, USA.
  • Stevens JM; Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, USA.
  • Kariofillis SK; Chemical Process Development, Bristol Myers Squibb, Summit, NJ, USA.
  • Tom MJ; Department of Chemistry, Princeton University, Princeton, NJ, USA.
  • Golden DL; Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, USA.
  • Li J; Department of Chemistry, Columbia University, New York, NY, USA.
  • Tabora JE; Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, USA.
  • Parasram M; Chemical Process Development, Bristol Myers Squibb, Summit, NJ, USA.
  • Shields BJ; Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA.
  • Primer DN; Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA.
  • Hao B; Department of Chemistry, Princeton University, Princeton, NJ, USA.
  • Del Valle D; Department of Chemistry, New York University, New York, NY, USA.
  • DiSomma S; Department of Chemistry, Princeton University, Princeton, NJ, USA.
  • Furman A; Molecular Structure and Design, Bristol Myers Squibb, Cambridge, MA, USA.
  • Zipp GG; Chemical Process Development, Bristol Myers Squibb, Summit, NJ, USA.
  • Melnikov S; Loxo Oncology at Lilly, Louisville, CO, USA.
  • Paulson J; Janssen Research and Development, Spring House, PA, USA.
  • Doyle AG; Chemical Process Development, Bristol Myers Squibb, New Brunswick, NJ, USA.
Nature ; 626(8001): 1025-1033, 2024 Feb.
Article in En | MEDLINE | ID: mdl-38418912
ABSTRACT
Reaction conditions that are generally applicable to a wide variety of substrates are highly desired, especially in the pharmaceutical and chemical industries1-6. Although many approaches are available to evaluate the general applicability of developed conditions, a universal approach to efficiently discover these conditions during optimizations is rare. Here we report the design, implementation and application of reinforcement learning bandit optimization models7-10 to identify generally applicable conditions by efficient condition sampling and evaluation of experimental feedback. Performance benchmarking on existing datasets statistically showed high accuracies for identifying general conditions, with up to 31% improvement over baselines that mimic state-of-the-art optimization approaches. A palladium-catalysed imidazole C-H arylation reaction, an aniline amide coupling reaction and a phenol alkylation reaction were investigated experimentally to evaluate use cases and functionalities of the bandit optimization model in practice. In all three cases, the reaction conditions that were most generally applicable yet not well studied for the respective reaction were identified after surveying less than 15% of the expert-designed reaction space.

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Nature Year: 2024 Document type: Article Affiliation country: Country of publication:

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Nature Year: 2024 Document type: Article Affiliation country: Country of publication: