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Effects of environmental phenols on eGFR: machine learning modeling methods applied to cross-sectional studies.
Liu, Lei; Zhou, Hao; Wang, Xueli; Wen, Fukang; Zhang, Guibin; Yu, Jinao; Shen, Hui; Huang, Rongrong.
Affiliation
  • Liu L; Department of Pathology, Affiliated Hospital of Nantong University, Nantong, China.
  • Zhou H; Department of Thoracic Surgery, Affiliated Hospital of Nantong University, Nantong, China.
  • Wang X; Department of Pathology, Qingdao Eighth People's Hospital, Qingdao, China.
  • Wen F; Institute of Computer Science and Engineering, Sun Yat-Sen University, Guangzhou, China.
  • Zhang G; College of Electronic and Information Engineering, Tongji University, Shanghai, China.
  • Yu J; Institute of Computer Science and Engineering, University of Wisconsin-Madison, Madison, WI, United States.
  • Shen H; Department of Computer Science and Engineering, The Ohio State University, Columbus, OH, United States.
  • Huang R; Department of Pharmacy, Affiliated Hospital of Nantong University, Nantong, China.
Front Public Health ; 12: 1405533, 2024.
Article in En | MEDLINE | ID: mdl-39148651
ABSTRACT

Purpose:

Limited investigation is available on the correlation between environmental phenols' exposure and estimated glomerular filtration rate (eGFR). Our target is established a robust and explainable machine learning (ML) model that associates environmental phenols' exposure with eGFR.

Methods:

Our datasets for constructing the associations between environmental phenols' and eGFR were collected from the National Health and Nutrition Examination Survey (NHANES, 2013-2016). Five ML models were contained and fine-tuned to eGFR regression by phenols' exposure. Regression evaluation metrics were used to extract the limitation of the models. The most effective model was then utilized for regression, with interpretation of its features carried out using shapley additive explanations (SHAP) and the game theory python package to represent the model's regression capacity.

Results:

The study identified the top-performing random forest (RF) regressor with a mean absolute error of 0.621 and a coefficient of determination of 0.998 among 3,371 participants. Six environmental phenols with eGFR in linear regression models revealed that the concentrations of triclosan (TCS) and bisphenol S (BPS) in urine were positively correlated with eGFR, and the correlation coefficients were ß = 0.010 (p = 0.026) and ß = 0.007 (p = 0.004) respectively. SHAP values indicate that BPS (1.38), bisphenol F (BPF) (0.97), 2,5-dichlorophenol (0.87), TCS (0.78), BP3 (0.60), bisphenol A (BPA) (0.59) and 2,4-dichlorophenol (0.47) in urinary contributed to the model.

Conclusion:

The RF model was efficient in identifying a correlation between phenols' exposure and eGFR among United States NHANES 2013-2016 participants. The findings indicate that BPA, BPF, and BPS are inversely associated with eGFR.
Subject(s)
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Phenols / Nutrition Surveys / Machine Learning / Glomerular Filtration Rate Limits: Adult / Female / Humans / Male / Middle aged Language: En Journal: Front Public Health Year: 2024 Document type: Article Affiliation country:

Full text: 1 Collection: 01-internacional Database: MEDLINE Main subject: Phenols / Nutrition Surveys / Machine Learning / Glomerular Filtration Rate Limits: Adult / Female / Humans / Male / Middle aged Language: En Journal: Front Public Health Year: 2024 Document type: Article Affiliation country: