Your browser doesn't support javascript.
loading
A knowledge-transfer-based approach for combining ordinal regression and medical scoring system in the early prediction of sepsis with electronic health records.
Ji, Yu; Wang, Kaipeng; Yuan, Yuan; Wang, Yueguo; Liu, Qingyuan; Wang, Yulan; Sun, Jian; Wang, Wenwen; Wang, Huanli; Zhou, Shusheng; Jin, Kui; Zhang, Mengping; Lai, Yinglei.
Affiliation
  • Ji Y; School of Mathematical Sciences, University of Science and Technology of China, Hefei, Anhui, 230026, China.
  • Wang K; School of Mathematics and Statistics, Nanjing University of Science and Technology, Nanjing, Jiangsu, 210094, China.
  • Yuan Y; Graduate School of Bengbu Medical College, Bengbu, Anhui, China; Department of Emergency Medicine, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China.
  • Wang Y; Department of Emergency Medicine, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China.
  • Liu Q; School of Mathematics and Physics, Anhui Jianzhu University, Hefei, Anhui, 230009, China.
  • Wang Y; Department of Emergency Medicine, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China.
  • Sun J; Department of Emergency Medicine, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China.
  • Wang W; Department of Emergency Medicine, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China.
  • Wang H; Department of Information Center, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China.
  • Zhou S; Department of Emergency Medicine, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China.
  • Jin K; Department of Emergency Medicine, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China.
  • Zhang M; School of Mathematical Sciences, University of Science and Technology of China, Hefei, Anhui, 230026, China.
  • Lai Y; School of Mathematical Sciences, University of Science and Technology of China, Hefei, Anhui, 230026, China; Department of Statistics, The George Washington University, Washington DC, USA. Electronic address: Laiyinglei@ustc.edu.cn.
Comput Biol Chem ; 113: 108203, 2024 Sep 02.
Article in En | MEDLINE | ID: mdl-39244896
ABSTRACT

OBJECTIVE:

The prediction of sepsis, especially early diagnosis, has received a significant attention in biomedical research. In order to improve current medical scoring system and overcome the limitations of class imbalance and sample size of local EHR (electronic health records), we propose a novel knowledge-transfer-based approach, which combines a medical scoring system and an ordinal logistic regression model. MATERIALS AND

METHODS:

Medical scoring systems (i.e. NEWS, SIRS and QSOFA) are generally robust and useful for sepsis diagnosis. With local EHR, machine-learning-based methods have been widely used for building prediction models/methods, but they are often impacted by class imbalance and sample size. Knowledge distillation and knowledge transfer have recently been proposed as a combination approach for improving the prediction performance and model generalization. In this study, we developed a novel knowledge-transfer-based method for combining a medical scoring system (after a proposed score transformation) and an ordinal logistic regression model. We mathematically confirmed that it was equivalent to a specific form of the weighted regression. Furthermore, we theoretically explored its effectiveness in the scenario of class imbalance.

RESULTS:

For the local dataset and the MIMIC-IV dataset, the VUS (the volume under the multi-dimensional ROC surface, a generalization measure of AUC-ROC for ordinal categories) of the knowledge-transfer-based model (ORNEWS) based on the NEWS scoring system were 0.384 and 0.339, respectively, while the VUS of the traditional ordinal regression model (OR) were 0.352 and 0.322, respectively. Consistent analysis results were also observed for the knowledge-transfer-based models based on the SIRS/QSOFA scoring systems in the ordinal scenarios. Additionally, the predicted probabilities and the binary classification ROC curves of the knowledge-transfer-based models indicated that this approach enhanced the predicted probabilities for the minority classes while reducing the predicted probabilities for the majority classes, which improved AUCs/VUSs on imbalanced data.

DISCUSSION:

Knowledge transfer, which combines a medical scoring system and a machine-learning-based model, improves the prediction performance for early diagnosis of sepsis, especially in the scenarios of class imbalance and limited sample size.
Key words

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Comput Biol Chem Journal subject: BIOLOGIA / INFORMATICA MEDICA / QUIMICA Year: 2024 Document type: Article Affiliation country: Country of publication:

Full text: 1 Collection: 01-internacional Database: MEDLINE Language: En Journal: Comput Biol Chem Journal subject: BIOLOGIA / INFORMATICA MEDICA / QUIMICA Year: 2024 Document type: Article Affiliation country: Country of publication: