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Hydrogenic Stretch Spectroscopy of Glycine-Water Complexes: Anharmonic Ab Initio Classical Separable Potential Calculations.
Sagiv, Lior; Hirshberg, Barak; Gerber, R Benny.
Afiliação
  • Sagiv L; Institute of Chemistry and the Fritz Haber Center for Molecular Dynamics , The Hebrew University , Jerusalem 9190401 , Israel.
  • Hirshberg B; Institute of Chemistry and the Fritz Haber Center for Molecular Dynamics , The Hebrew University , Jerusalem 9190401 , Israel.
  • Gerber RB; Institute of Chemistry and the Fritz Haber Center for Molecular Dynamics , The Hebrew University , Jerusalem 9190401 , Israel.
J Phys Chem A ; 123(39): 8377-8384, 2019 Oct 03.
Article em En | MEDLINE | ID: mdl-31538481
ABSTRACT
The anharmonic frequencies of O-H, C-H, and N-H stretching modes of hydrogen-bonded glycine-H2O complexes are calculated using ab initio classical separable potential approximation. In this approach, ab initio molecular dynamic simulations are used to determine an effective classical potential for each of the normal modes of the system. The frequencies are calculated by solving the time-independent Schrödinger equation for each mode using time-averaged potentials. Three complex structures are studied, which differ in the location of the water molecule on the amino acid. Significant differences are found between the spectra of the three structures, and signatures of individual complexes are established. It is demonstrated that anharmonic effects are essential in the discrimination between different structures, while frequency differences at the harmonic level are much smaller. Intensities are also computed and found to carry information on differences between structures, but the role of anharmonicity in this is small.

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Revista: J Phys Chem A Assunto da revista: QUIMICA Ano de publicação: 2019 Tipo de documento: Article País de afiliação: Israel País de publicação: EEUU / ESTADOS UNIDOS / ESTADOS UNIDOS DA AMERICA / EUA / UNITED STATES / UNITED STATES OF AMERICA / US / USA

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Revista: J Phys Chem A Assunto da revista: QUIMICA Ano de publicação: 2019 Tipo de documento: Article País de afiliação: Israel País de publicação: EEUU / ESTADOS UNIDOS / ESTADOS UNIDOS DA AMERICA / EUA / UNITED STATES / UNITED STATES OF AMERICA / US / USA