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[Sequence analysis and 3D molecular structure simulation of a novel HLA allele B*51:159].
Qiao, Wenben; Song, Yonghong; Nie, Xiangmin; Liu, Yan; Zhu, Haifeng; Zhang, Yi.
Afiliação
  • Qiao W; Blood Center of Shandong Province, Jinan, Shandong 250014, China. shbiochem@163.com.
Zhonghua Yi Xue Yi Chuan Xue Za Zhi ; 36(11): 1133-1135, 2019 Nov 10.
Artigo em Chinês | MEDLINE | ID: mdl-31703144
ABSTRACT

OBJECTIVE:

To identify a novel human leukocyte antigen (HLA) B allele in a Chinese Han individual and construct its three-dimensional structure.

METHODS:

The initial HLA genotyping was performed by PCR-sequence-based typing (PCR-SBT). The ambiguous allele was confirmed with single-strand DNA sequencing. The DNA sequence was analyzed to identify the difference between the novel allele and its closest matching allele. Finally, the three-dimensional molecular structure of the novel allele was constructed using a Swiss-Model.

RESULTS:

One allele of the subject at the HLA-B locus was B*440301, whilst the other was a novel allele which differed from the closest matching allele B*51010101 by nucleotide (nt) 329 A to C in exon 2, resulting in an amino acid change at codon 86 (p.Asn86Thr).

CONCLUSION:

A novel HLA-B allele has been identified and officially named as HLA-B*51159 by the WHO Nomenclature Committee for Factors of the HLA System. The three-dimensional structure of B*51159 was simulated.
Assuntos
Texto completo: Disponível Coleções: Bases de dados internacionais Base de dados: MEDLINE Assunto principal: Antígenos HLA-B / Grupo com Ancestrais do Continente Asiático Limite: Humanos Idioma: Chinês Revista: Zhonghua Yi Xue Yi Chuan Xue Za Zhi Assunto da revista: Genética Médica Ano de publicação: 2019 Tipo de documento: Artigo País de afiliação: China

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Texto completo: Disponível Coleções: Bases de dados internacionais Base de dados: MEDLINE Assunto principal: Antígenos HLA-B / Grupo com Ancestrais do Continente Asiático Limite: Humanos Idioma: Chinês Revista: Zhonghua Yi Xue Yi Chuan Xue Za Zhi Assunto da revista: Genética Médica Ano de publicação: 2019 Tipo de documento: Artigo País de afiliação: China
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