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Bacteriome and Mycobiome in Nicotiana tabacum Fields Affected by Black Shank Disease.
Plant Dis ; 104(2): 315-319, 2020 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-31809254
Phytophthora nicotianae is a widespread cause of black shank disease of tobacco plants and causes substantial harvest losses in all major cultivation areas. The oomycete primarily affects plant roots and the stem, where it leads to a progressing decay of the diseased tissues. In this resource announcement, we provide two complementary datasets comprising 16S gene fragment amplicons (bacteriome) and ITS1 region amplicons (mycobiome) that were sequenced on an Illumina-based platform. Soil samples were obtained from disease-affected fields in Guizhou province (China) and include control samples from adhering fields without previous disease incidence. Both datasets were acquired at a high sequencing depth and accompanied by detailed metadata, which facilitate their implementation in comparative studies. The resource announcement provides a basis for disease-specific biomarker detection and correlation studies that include the microbiome.





Texto completo: Disponível Coleções: Bases de dados internacionais Base de dados: MEDLINE Idioma: Inglês Revista: Plant Dis Ano de publicação: 2020 Tipo de documento: Artigo País de afiliação: China