Detalhe da pesquisa
1.
Salmonella persisters promote the spread of antibiotic resistance plasmids in the gut.
Nature
; 573(7773): 276-280, 2019 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-31485077
2.
My host's enemy is my enemy: plasmids carrying CRISPR-Cas as a defence against phages.
Proc Biol Sci
; 291(2015): 20232449, 2024 Jan 31.
Artigo
em Inglês
| MEDLINE | ID: mdl-38262608
3.
Comparing treatment strategies to reduce antibiotic resistance in an in vitro epidemiological setting.
Proc Natl Acad Sci U S A
; 118(13)2021 03 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-33766914
4.
estimateR: an R package to estimate and monitor the effective reproductive number.
BMC Bioinformatics
; 24(1): 310, 2023 Aug 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-37568078
5.
Epidemiological and evolutionary consequences of different types of CRISPR-Cas systems.
PLoS Comput Biol
; 18(7): e1010329, 2022 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-35881633
6.
Increase in antimicrobial resistance in Escherichia coli in food animals between 1980 and 2018 assessed using genomes from public databases.
J Antimicrob Chemother
; 77(3): 646-655, 2022 02 23.
Artigo
em Inglês
| MEDLINE | ID: mdl-34894245
7.
Estimating plasmid conjugation rates: A new computational tool and a critical comparison of methods.
Plasmid
; 121: 102627, 2022 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-35271855
8.
Estimating the cumulative incidence of SARS-CoV-2 with imperfect serological tests: Exploiting cutoff-free approaches.
PLoS Comput Biol
; 17(2): e1008728, 2021 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-33635863
9.
Correction: Practical considerations for measuring the effective reproductive number, Rt.
PLoS Comput Biol
; 17(12): e1009679, 2021 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-34879070
10.
Quantifying the impact of treatment history on plasmid-mediated resistance evolution in human gut microbiota.
Proc Natl Acad Sci U S A
; 116(46): 23106-23116, 2019 11 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-31666328
11.
Stochastic Gene Expression Influences the Selection of Antibiotic Resistance Mutations.
Mol Biol Evol
; 37(1): 58-70, 2020 Jan 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-31504754
12.
Death and population dynamics affect mutation rate estimates and evolvability under stress in bacteria.
PLoS Biol
; 16(5): e2005056, 2018 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-29750784
13.
Effective polyploidy causes phenotypic delay and influences bacterial evolvability.
PLoS Biol
; 16(2): e2004644, 2018 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-29470493
14.
Practical considerations for measuring the effective reproductive number, Rt.
PLoS Comput Biol
; 16(12): e1008409, 2020 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-33301457
15.
Quantifying the fitness cost of HIV-1 drug resistance mutations through phylodynamics.
PLoS Pathog
; 14(2): e1006895, 2018 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-29462208
16.
Cancer-induced immunosuppression can enable effectiveness of immunotherapy through bistability generation: A mathematical and computational examination.
J Theor Biol
; 492: 110185, 2020 05 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-32035826
17.
Dissecting HIV Virulence: Heritability of Setpoint Viral Load, CD4+ T-Cell Decline, and Per-Parasite Pathogenicity.
Mol Biol Evol
; 35(1): 27-37, 2018 01 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-29029206
18.
Assessing the public health impact of tolerance-based therapies with mathematical models.
PLoS Comput Biol
; 14(5): e1006119, 2018 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-29727455
19.
Population Heterogeneity in Mutation Rate Increases the Frequency of Higher-Order Mutants and Reduces Long-Term Mutational Load.
Mol Biol Evol
; 34(2): 419-436, 2017 02 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-27836985
20.
Antibiotic-Resistant Neisseria gonorrhoeae Spread Faster with More Treatment, Not More Sexual Partners.
PLoS Pathog
; 12(5): e1005611, 2016 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-27196299