Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 86
Filtrar
1.
J Exp Bot ; 74(5): 1331-1342, 2023 03 13.
Artigo em Inglês | MEDLINE | ID: mdl-36527431

RESUMO

The wild relatives of rice hold unexplored genetic diversity that can be employed to feed an estimated population of 10 billion by 2050. The Oryza Map Alignment Project (OMAP) initiated in 2003 has provided comprehensive genomic resources for comparative, evolutionary, and functional characterization of the wild relatives of rice, facilitating the cloning of >600 rice genes, including those for grain width (GW5) and submergence tolerance (SUB1A). Following in the footsteps of the original project, the goal of 'IOMAP: the Americas' is to investigate the present and historic genetic diversity of wild Oryza species endemic to the Americas through the sequencing of herbaria and in situ specimens. The generation of a large diversity panel describing past and current genetic status and potential erosion of genetic variation in the populations will provide useful knowledge for the conservation of the biodiversity in these species. The wild relatives of rice in the Americas present a wide range of resistance traits useful for crop improvement and neodomestication approaches. In the race against time for a sustainable food future, the neodomestication of the first cereal species recently accomplished in O. alta opens the door to the potential neodomestication of the other wild Oryza species in Americas.


Assuntos
Oryza , Oryza/genética , Fenótipo , Genômica , Grão Comestível/genética
2.
Funct Integr Genomics ; 22(5): 713-729, 2022 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-35906324

RESUMO

The WRKY transcription factor gene family is known to be involved in plant defense against pathogens and in tolerance to different environmental stresses at different stages of development. The response mechanisms through which these genes act can be influenced by different phytohormones as well as by many trans- and cis-acting elements, making this network an important topic for analysis, but still something complex to fully understand. According to available reports, these genes can also perform important roles in pome species (Malus spp. and Pyrus spp.) metabolism, especially in adaptation of these plants to stressful conditions. Here, we present a quick review of what is known about WRKY genes in Malus and Pyrus genomes offering a simple way to understand what is already known about this topic. We also add information connecting the evolution of these transcription factors with others that can also be found in pomes.


Assuntos
Malus , Pyrus , Perfilação da Expressão Gênica , Regulação da Expressão Gênica de Plantas , Genoma de Planta , Malus/genética , Malus/metabolismo , Família Multigênica , Filogenia , Reguladores de Crescimento de Plantas/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Pyrus/genética , Estresse Fisiológico/genética , Fatores de Transcrição/genética , Fatores de Transcrição/metabolismo
3.
Funct Integr Genomics ; 22(1): 35-53, 2022 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-34751851

RESUMO

Microsatellites (SSRs) are tandem repeat sequences in eukaryote genomes, including plant cytoplasmic genomes. The mitochondrial genome (mtDNA) has been shown to vary in size, number, and distribution of SSRs among different plant groups. Thus, SSRs contribute with genomic diversity in mtDNAs. However, the abundance, distribution, and evolutionary significance of SSRs in mtDNA from a wide range of algae and plants have not been explored. In this study, the mtDNAs of 204 plant and algal species were investigated related to the presence of SSRs. The number of SSRs was positively correlated with genome size. Its distribution is dependent on plant and algal groups analyzed, although the cluster analysis indicates the conservation of some common motifs in algal and terrestrial plants that reflect common ancestry of groups. Many SSRs in coding and non-coding regions can be useful for molecular markers. Moreover, mitochondrial SSRs are highly abundant, representing an important source for natural or induced genetic variation, i.e., for biotechnological approaches that can modulate mtDNA gene regulation. Thus, this comparative study increases the understanding of the plant and algal SSR evolution and brings perspectives for further studies.


Assuntos
Genoma Mitocondrial , Genoma de Planta , Repetições de Microssatélites , Plantas , DNA Mitocondrial/genética , Plantas/genética
4.
Plant Cell ; 28(10): 2478-2492, 2016 10.
Artigo em Inglês | MEDLINE | ID: mdl-27624758

RESUMO

Although many transcription factors involved in cell wall morphogenesis have been identified and studied, it is still unknown how genetic and molecular regulation of cell wall biosynthesis is integrated into developmental programs. We demonstrate by molecular genetic studies that SEEDSTICK (STK), a transcription factor controlling ovule and seed integument identity, directly regulates PMEI6 and other genes involved in the biogenesis of the cellulose-pectin matrix of the cell wall. Based on atomic force microscopy, immunocytochemistry, and chemical analyses, we propose that structural modifications of the cell wall matrix in the stk mutant contribute to defects in mucilage release and seed germination under water-stress conditions. Our studies reveal a molecular network controlled by STK that regulates cell wall properties of the seed coat, demonstrating that developmental regulators controlling organ identity also coordinate specific aspects of cell wall characteristics.


Assuntos
Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , Proteínas de Domínio MADS/metabolismo , Sementes/metabolismo , Arabidopsis/genética , Proteínas de Arabidopsis/genética , Regulação da Expressão Gênica de Plantas/genética , Regulação da Expressão Gênica de Plantas/fisiologia , Proteínas de Domínio MADS/genética , Sementes/genética , Fatores de Transcrição/genética , Fatores de Transcrição/metabolismo
5.
Hereditas ; 156: 16, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31160891

RESUMO

BACKGROUND: Bread wheat is one of the most important crops in the world. Its domestication coincides with the beginning of agriculture and since then, it has been constantly under selection by humans. Its breeding has followed millennia of cultivation, sometimes with unintended selection on adaptive traits, and later by applying intentional but empirical selective pressures. For more than one century, wheat breeding has been based on science, and has been constantly evolving due to on farm agronomy and breeding program improvements. The aim of this work is to briefly review wheat breeding, with emphasis on the current advances. DISCUSSION: Improving yield potential, resistance/tolerance to biotic and abiotic stresses, and baking quality, have been priorities for breeding this cereal, however, new objectives are arising, such as biofortification enhancement. The narrow genetic diversity and complexity of its genome have hampered the breeding progress and the application of biotechnology. Old approaches, such as the introgression from relative species, mutagenesis, and hybrid breeding are strongly reappearing, motivated by an accumulation of knowledge and new technologies. A revolution has taken place regarding the use of molecular markers whereby thousands of plants can be routinely genotyped for thousands of loci. After 13 years, the wheat reference genome sequence and annotation has finally been completed, and is currently available to the scientific community. Transgenics, an unusual approach for wheat improvement, still represents a potential tool, however it is being replaced by gene editing, whose technology along with genomic selection, speed breeding, and high-throughput phenotyping make up the most recent frontiers for future wheat improvement. FINAL CONSIDERATION: Agriculture and plant breeding are constantly evolving, wheat has played a major role in these processes and will continue through decades to come.


Assuntos
Produtos Agrícolas/genética , Melhoramento Vegetal , Triticum/genética , Evolução Molecular , Engenharia Genética , Genoma de Planta , Genômica/métodos , Sequenciamento de Nucleotídeos em Larga Escala , Mutagênese , Locos de Características Quantitativas , Seleção Genética
6.
BMC Genomics ; 16: 538, 2015 Jul 22.
Artigo em Inglês | MEDLINE | ID: mdl-26194356

RESUMO

BACKGROUND: Comparative evolutionary analysis of whole genomes requires not only accurate annotation of gene space, but also proper annotation of the repetitive fraction which is often the largest component of most if not all genomes larger than 50 kb in size. RESULTS: Here we present the Rice TE database (RiTE-db)--a genus-wide collection of transposable elements and repeated sequences across 11 diploid species of the genus Oryza and the closely-related out-group Leersia perrieri. The database consists of more than 170,000 entries divided into three main types: (i) a classified and curated set of publicly-available repeated sequences, (ii) a set of consensus assemblies of highly-repetitive sequences obtained from genome sequencing surveys of 12 species; and (iii) a set of full-length TEs, identified and extracted from 12 whole genome assemblies. CONCLUSIONS: This is the first report of a repeat dataset that spans the majority of repeat variability within an entire genus, and one that includes complete elements as well as unassembled repeats. The database allows sequence browsing, downloading, and similarity searches. Because of the strategy adopted, the RiTE-db opens a new path to unprecedented direct comparative studies that span the entire nuclear repeat content of 15 million years of Oryza diversity.


Assuntos
Bases de Dados Genéticas , Evolução Molecular , Genoma de Planta , Oryza/genética , Elementos de DNA Transponíveis/genética , Genômica , Software
7.
Plants (Basel) ; 12(18)2023 Sep 05.
Artigo em Inglês | MEDLINE | ID: mdl-37765340

RESUMO

WRKY transcription factor genes compose an important family of transcriptional regulators that are present in several plant species. According to previous studies, these genes can also perform important roles in bilberry (Vaccinium myrtillus L.) metabolism, making it essential to deepen our understanding of fruit ripening regulation and anthocyanin biosynthesis. In this context, the detailed characterization of these proteins will provide a comprehensive view of the functional features of VmWRKY genes in different plant organs and in response to different intensities of light. In this study, the investigation of the complete genome of the bilberry identified 76 VmWRKY genes that were evaluated and distributed in all twelve chromosomes. The proteins encoded by these genes were classified into four groups (I, II, III, and IV) based on their conserved domains and zinc finger domain types. Fifteen pairs of VmWRKY genes in segmental duplication and four pairs in tandem duplication were detected. A cis element analysis showed that all promoters of the VmWRKY genes contain at least one potential cis stress-response element. Differential expression analysis of RNA-seq data revealed that VmWRKY genes from bilberry show preferential or specific expression in samples. These findings provide an overview of the functional characterization of these proteins in bilberry.

8.
Front Plant Sci ; 13: 1019311, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36926258

RESUMO

The genus Vitis belongs to the Vitaceae family and is divided into two subgenera: Muscadinia and Vitis, the main difference between these subgenera being the number of chromosomes. There are many hypotheses about the origin of the genus, which have been formed with archaeological studies and lately with molecular analyses. Even though there is no consensus on the place of origin, these studies have shown that grapes have been used by man since ancient times, starting later on its domestication. Most studies point to the Near East and Greece as the beginning of domestication, current research suggests it took place in parallel in different sites, but in all cases Vitis vinifera (L.) subsp. sylvestris [Vitis vinifera (L.) subsp. sylvestris (Gmelin) Hagi] seems to be the species chosen by our ancestors to give rise to the now known Vitis vinifera (L.) subsp. vinifera [=sativa (Hegi)= caucasica (Vavilov)]. Its evolution and expansion into other territories followed the formation of new empires and their expansion, and this is where the historical importance of this crop lies. In this process, plants with hermaphrodite flowers were preferentially selected, with firmer, sweeter, larger fruits of different colors, thus favoring the selection of genes associated with these traits, also resulting in a change in seed morphology. Currently, genetic improvement programs have made use of wild species for the introgression of disease resistance genes and tolerance to diverse soil and climate environments. In addition, the mapping of genes of interest, both linked to agronomic and fruit quality traits, has allowed the use of molecular markers for assisted selection. Information on the domestication process and genetic resources help to understand the gene pool available for the development of cultivars that respond to producer and consumer requirements.

9.
Biol Trace Elem Res ; 200(10): 4505-4523, 2022 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-34773578

RESUMO

Rice is the staple diet to half of the world's population, being a major source of carbohydrates, vitamins, and some essential elements. However, rice naturally contains low amounts of essential minerals such as iron (Fe) and zinc (Zn), which are drastically decreased after milling. Thus, populations that consume mostly rice may have micronutrient deficiency, which is associated with different diseases. On the other hand, rice irrigated by flooding has a high ability to accumulate arsenic (As) in the grain. Therefore, when rice is grown in areas with contaminated soil or irrigation water, it represents a risk factor for consumers, since As is associated with cancer and other diseases. Different strategies have been used to mitigate micronutrient deficiencies such as Fe and Zn and to prevent As from entering the food chain. Each strategy has its positive and its negative sides. The development of genetically biofortified rice plants with Fe and Zn and with low As accumulation is one of the most promising strategies, since it does not represent an additional cost for farmers, and gives benefits to consumers as well. Considering the importance of genetic improvement (traditional or molecular) to decrease the impact of micronutrient deficiencies such as Fe and Zn and contamination with As, this review aimed to summarize the major efforts, advances, and challenges for genetic biofortification of Fe and Zn and decrease in As content in rice grains.


Assuntos
Arsênio , Oryza , Biofortificação , Ferro , Micronutrientes , Oryza/genética , Zinco
10.
Biol Trace Elem Res ; 199(3): 1194-1206, 2021 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-32537719

RESUMO

A healthy diet is directly associated with a nutrient-rich and toxic contaminant poor intake. A diet poor in diversity can lead to micronutrient deficiency. The intake of functional foods can provide benefits in the prevention and treatment of diseases. Oats are a functional food; are a source of soluble fiber, lipids, proteins, vitamins, minerals, and polyphenols; and are low in carbohydrate content. Thus, in this study, we characterize mineral accumulation, fatty acid composition, and the absence of contaminants in oat genotypes to evaluate the potential of this cereal as food to minimize the effects of micronutrient deficiency. Most of the oat genotypes showed higher mineral levels than other cereals such as wheat, rice, and maize. FAEM 5 Chiarasul, Barbarasul, UPFA Ouro, URS Altiva, URS Brava, and URS Taura showed higher iron concentration while URS Brava showed the highest zinc concentration. The oat genotypes did not show significant arsenic, strontium, and cadmium accumulation. Considering the accumulation of trace elements in the grain, little genetic diversity among the analyzed oat accessions was detected, dividing into two groups. Regarding fatty acid composition, IPR Afrodite, FAEM 4 Carlasul, FAEM 5 Chiarasul, URS Taura, Barbarasul, and URS 21 showed higher essential fatty acid concentrations. These genotypes can be used in crosses with URS Brava, which displayed a higher Fe and Zn accumulation and is genetically distant from the other cultivars. Oat is a functional food showing ability for the accumulation of minerals and also essential fatty acids.


Assuntos
Avena , Grão Comestível , Brasil , Ácidos Graxos , Genótipo , Minerais
11.
Front Plant Sci ; 10: 1326, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31781133

RESUMO

The high selection pressure applied in rice breeding since its domestication thousands of years ago has caused a narrowing in its genetic variability. Obtaining new rice cultivars therefore becomes a major challenge for breeders and developing strategies to increase the genetic variability has demanded the attention of several research groups. Understanding mutations and their applications have paved the way for advances in the elucidation of a genetic, physiological, and biochemical basis of rice traits. Creating variability through mutations has therefore grown to be among the most important tools to improve rice. The small genome size of rice has enabled a faster release of higher quality sequence drafts as compared to other crops. The move from structural to functional genomics is possible due to an array of mutant databases, highlighting mutagenesis as an important player in this progress. Furthermore, due to the synteny among the Poaceae, other grasses can also benefit from these findings. Successful gene modifications have been obtained by random and targeted mutations. Furthermore, following mutation induction pathways, techniques have been applied to identify mutations and the molecular control of DNA damage repair mechanisms in the rice genome. This review highlights findings in generating rice genome resources showing strategies applied for variability increasing, detection and genetic mechanisms of DNA damage repair.

12.
J Appl Genet ; 60(1): 27-31, 2019 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-30353473

RESUMO

Narrowing of genetic diversity and the quantitative nature of most agronomic traits is a challenge for rice breeding. Genome-wide association studies have a great potential to identify important variation in loci underlying quantitative and complex traits; however, before performing the analysis, it is important to assess parameters of the genotypic data and population under study, to improve the accuracy of the genotype-phenotype associations. The aim of this study was to access the genetic diversity, linkage disequilibrium, and population structure of a working panel of Brazilian and several introduced rice accessions, which are currently being phenotyped for a vast number of traits to undergo association mapping. Ninety-four accessions were genotyped with 7098 SNPs, and after filtering for higher call rates and removing rare variants, 93 accessions and 4973 high-quality SNPs remained for subsequent analyses and association studies. The overall mean of the polymorphic information content, heterozygosity, and gene diversity of the SNPs was comparable to other rice panels. The r2 measure of linkage disequilibrium decayed to 0.25 in approximately 150 kb, a slow decay, explained by the autogamous nature of rice and the small size of the panel. Regarding population structure, eight groups were formed according to Bayesian clustering. Principle components and neighbor-joining analyses were able to distinguish part of the groups formed, mainly regarding the sub-species indica and japonica. Our results demonstrate that the population and SNPs are of high quality for association mapping.


Assuntos
Genética Populacional , Desequilíbrio de Ligação , Oryza/genética , Polimorfismo de Nucleotídeo Único , Brasil , Mapeamento Cromossômico , Estudos de Associação Genética , Melhoramento Vegetal
13.
Front Plant Sci ; 10: 727, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31263469

RESUMO

Background: Fusarium Head Blight (FHB) is a worldwide devastating disease of bread wheat (Triticum aestivum L.). Genetic resistance is the most effective way to control FHB and many QTL related to this trait have been mapped on the wheat genetic map. This information, however, must be refined to be more efficiently used in breeding programs and for the advance of the basic research. The objective of the present study was to in-depth analyze the QTLome of FHB resistance in bread wheat, further integrating genetic, genomic, and transcriptomic data, aiming to find candidate genes. Methods: An exhaustive bibliographic review on 76 scientific papers was carried out collecting information about QTL related to FHB resistance mapped on bread wheat. A dense genetic consensus map with 572,862 loci was generated for QTL projection. Meta-analysis could be performed on 323 QTL. Candidate gene mining was carried out within the most refined loci, containing genes that were cross-validated with publicly available transcriptional expression data of wheat under Fusarium infection. Most highlighted genes were investigated for protein evidence. Results: A total of 556 QTL were found in the literature, distributed on all sub-genomes and chromosomes of wheat. Meta-analysis generated 65 meta-QTL, and this refinement allows one to find markers more tightly linked to these regions. Candidate gene mining within the most refined meta-QTL, meta-QTL 1/chr. 3B, harvested 324 genes and transcriptional data cross-validated 10 of these genes, as responsive to FHB. One is of these genes encodes a Glycosiltransferase and the other encodes for a Cytochrome P450, and these such proteins have already been verified as being responsible for FHB resistance, but the remaining eight genes still have to be further studied, as promising loci for breeding. Conclusions: The QTLome of FHB resistance in wheat was successfully assembled and a refinement in terms of number and length of loci was obtained. The integration of the QTLome with genomic and transcriptomic data has allowed for the discovery of promising candidate genes for use in breeding programs.

14.
BMC Res Notes ; 12(1): 361, 2019 Jun 25.
Artigo em Inglês | MEDLINE | ID: mdl-31238948

RESUMO

OBJECTIVES: This study was conducted to establish a method for early, quick and cheap screening of iron excess tolerance in rice (Oryza sativa L.) cultivars. RESULTS: Based on the experiments, iron excess leads to reduction in shoot length (SL) and this can be a useful characteristic for adequate screening of tolerant genotypes. The sensitive genotypes Nipponbare and BR-IRGA 409 indicated higher accumulation of iron in their tissues while BRS-Agrisul and Epagri 108 also accumulated iron, but at lower concentrations. BR-IRGA 410 displayed an intermediate phenotype regarding iron accumulation. No changes in shoot Cu content can be observed when comparing treatments. On the other hand, an increase was seen for Zn and Mn when shoots are subjected to Fe2+ excess. Fe stress at a lower concentration than 7 mM increased Zn but decreased Mn contents in shoots of BR-IRGA 409. Strong positive correlations were found here for Fe × Zn (0.93); Fe × Mn (0.97) and Zn × Mn (0.92), probably due to the Fe-induced activation of bivalent cation transporters. Results show that genotypes scored as sensitive present higher concentration of Fe in shoots and this is an efficient method to characterize rice cultivars regarding iron response.


Assuntos
Adaptação Fisiológica/genética , Testes Genéticos , Ferro/toxicidade , Oryza/genética , Oryza/fisiologia , Adaptação Fisiológica/efeitos dos fármacos , Genótipo , Oryza/efeitos dos fármacos , Folhas de Planta/efeitos dos fármacos , Folhas de Planta/fisiologia , Brotos de Planta/efeitos dos fármacos , Brotos de Planta/fisiologia
15.
Curr Opin Plant Biol ; 45(Pt B): 268-275, 2018 10.
Artigo em Inglês | MEDLINE | ID: mdl-30060992

RESUMO

Rice WRKYs comprise a large family of transcription factors and present remarkable structure features and a unique DNA binding site. Their importance in plants goes beyond the response to stressful stimuli, since they participate in hormonal pathways and developmental processes. Indeed, the majority of WRKYs present an independent activation since they are able to perform self-transcriptional regulation. However, some WRKY activation depends on epigenetic and transcript regulation by micro RNAs. Their protein function depends, almost always, on the posttranslational changes. Taking to account its properties of auto-activation, all these regulators process are extremely important for complete WRKY regulation. In this sense, here we provide an overview of transcriptional activation and posttranscriptional and posttranslational regulation of rice WRKY genes under stresses.


Assuntos
Oryza/metabolismo , Proteínas de Plantas/metabolismo , Regulação da Expressão Gênica de Plantas/genética , Regulação da Expressão Gênica de Plantas/fisiologia , MicroRNAs/genética , MicroRNAs/metabolismo , Oryza/genética , Proteínas de Plantas/genética , Estresse Fisiológico/genética , Estresse Fisiológico/fisiologia , Fatores de Transcrição/genética , Fatores de Transcrição/metabolismo
16.
Funct Plant Biol ; 44(4): 419-429, 2017 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-32480575

RESUMO

Rice (Oryza sativa L.) is one of the most important species for food production worldwide, besides being an excellent genetic model among the grasses. Cold is one of the major abiotic factors reducing rice yield, primarily affecting germination and reproduction phases. Currently, the RNAseq technique allows the identification of differential expressed genes in response to a given treatment, such as cold stress. In the present work, a transcriptome (RNAseq) analysis was performed in the V3 phase for contrasting genotypes Oro (tolerant) and Tio Taka (sensitive), in response to cold (13°C). A total of 241 and 244M readings were obtained, resulting in the alignment of 25.703 and 26.963 genes in genotypes Oro and Tio Taka respectively. The analyses revealed 259 and 5579 differential expressed genes in response to cold in the genotypes Oro and Tio Taka respectively. Ontology classes with larger changes were metabolic process ~27%, cellular process ~21%, binding ~30% and catalytic activity ~22%. In the genotype Oro, 141 unique genes were identified, 118 were common between Oro and Tio Taka and 5461 were unique to Tio Taka. Genes involved in metabolic routes of signal transduction, phytohormones, antioxidant system and biotic stress were identified. These results provide an understanding that breeding for a quantitative trait, such as cold tolerance at germination, several gene loci must be simultaneously selected. In general, few genes were identified, but it was not possible to associate only one gene function as responsible for the cultivar tolerance; since different genes from different metabolic routes were identified. The genes described in the present work will be useful for future investigations and for the detailed validation in marker assisted selection projects for cold tolerance in the germination of rice.

17.
R. Ci. agrovet. ; 18(2): 163-169, 2019. tab
Artigo em Inglês | VETINDEX | ID: vti-21464

RESUMO

Canola (Brassica napus L. var. oleifera) is cultivated in the Southern Brazil as an alternative winter crop in the rotation system. No-tillage and hydromorphic soils favor the formation of aliphatic organic acids with short chain and low molecular weight, as acetic, butyric, and propionic acids. These acids may cause negative effects on the canola production. Thus, this study aimed to evaluate the response of five canola hybrid genotypes under the effect of acetic, butyric and propionic acids on the germination and initial phase of seedling growth. The results showed the characters evaluated respond differently to treatments applied within the same genotype. Therefore, the selection of a genotype with a resilient performance for the characters evaluated under stress is complex. Nevertheless, a sensitive profile response was observed in Hyola 433 genotype under different organic acids. Furthermore, acetic acid showed no negative impact on germination and initial growth of the genotypes.(AU)


A Canola (Brassica napus L. var. oleifera) é cultivada no Sul do Brasil como uma alternativa para a estação fria no sistema de rotação de culturas. O sistema de plantio direto e a ocorrência de solos hidromórficos favorece a formação de ácidos orgânicos alifáticos com cadeia curta e baixo peso molecular, como os ácidos acético, butírico e propiônico. Estes ácidos podem causar efeitos negativos na produção de canola. Assim, este estudo teve por objetivo avaliar a resposta de cinco genótipos híbridos de canola sob o efeito dos ácidos acético, butírico e propiônico na germinação e na fase inicial do crescimento da plântula. Os resultados demonstraram que os caracteres avaliados respondem de forma diferente em relação aos tratamentos aplicados dentro do mesmo genótipo. Dessa forma, a seleção de um genótipo que manteve um comportamento padrão nos caracteres avaliados sob estresse é dificultado. Entretanto, em uma visão geral, o genótipo Hyola 433 manteve respostas características de sensibilidade nos caracteres avaliados em relação aos ácidos utilizados. Ainda, foi detectado que o ácido acético teve menor efeito na germinação e na fase inicial de crescimento dos genótipos estudados.(AU)


Assuntos
Brassica napus/crescimento & desenvolvimento , Germinação , Ácidos Orgânicos/efeitos adversos , Ácido Acético/efeitos adversos , Ácido Butírico/efeitos adversos , Brassica napus/genética
18.
Rev. Ciênc. Agrovet. (Online) ; 18(2): 163-169, 2019. tab
Artigo em Inglês | VETINDEX | ID: biblio-1488323

RESUMO

Canola (Brassica napus L. var. oleifera) is cultivated in the Southern Brazil as an alternative winter crop in the rotation system. No-tillage and hydromorphic soils favor the formation of aliphatic organic acids with short chain and low molecular weight, as acetic, butyric, and propionic acids. These acids may cause negative effects on the canola production. Thus, this study aimed to evaluate the response of five canola hybrid genotypes under the effect of acetic, butyric and propionic acids on the germination and initial phase of seedling growth. The results showed the characters evaluated respond differently to treatments applied within the same genotype. Therefore, the selection of a genotype with a resilient performance for the characters evaluated under stress is complex. Nevertheless, a sensitive profile response was observed in Hyola 433 genotype under different organic acids. Furthermore, acetic acid showed no negative impact on germination and initial growth of the genotypes.


A Canola (Brassica napus L. var. oleifera) é cultivada no Sul do Brasil como uma alternativa para a estação fria no sistema de rotação de culturas. O sistema de plantio direto e a ocorrência de solos hidromórficos favorece a formação de ácidos orgânicos alifáticos com cadeia curta e baixo peso molecular, como os ácidos acético, butírico e propiônico. Estes ácidos podem causar efeitos negativos na produção de canola. Assim, este estudo teve por objetivo avaliar a resposta de cinco genótipos híbridos de canola sob o efeito dos ácidos acético, butírico e propiônico na germinação e na fase inicial do crescimento da plântula. Os resultados demonstraram que os caracteres avaliados respondem de forma diferente em relação aos tratamentos aplicados dentro do mesmo genótipo. Dessa forma, a seleção de um genótipo que manteve um comportamento padrão nos caracteres avaliados sob estresse é dificultado. Entretanto, em uma visão geral, o genótipo Hyola 433 manteve respostas características de sensibilidade nos caracteres avaliados em relação aos ácidos utilizados. Ainda, foi detectado que o ácido acético teve menor efeito na germinação e na fase inicial de crescimento dos genótipos estudados.


Assuntos
Brassica napus/crescimento & desenvolvimento , Brassica napus/genética , Germinação , Ácido Acético/efeitos adversos , Ácido Butírico/efeitos adversos , Ácidos Orgânicos/efeitos adversos
19.
Int J Plant Genomics ; 2008: 412696, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-18670612

RESUMO

Microsatellites or SSRs (simple sequence repeats) are ubiquitous short tandem duplications occurring in eukaryotic organisms. These sequences are among the best marker technologies applied in plant genetics and breeding. The abundant genomic, BAC, and EST sequences available in databases allow the survey regarding presence and location of SSR loci. Additional information concerning primer sequences is also the target of plant geneticists and breeders. In this paper, we describe a utility that integrates SSR searches, frequency of occurrence of motifs and arrangements, primer design, and PCR simulation against other databases. This simulation allows the performance of global alignments and identity and homology searches between different amplified sequences, that is, amplicons. In order to validate the tool functions, SSR discovery searches were performed in a database containing 28 469 nonredundant rice cDNA sequences.

20.
Sci. agric. ; 70(3)2013.
Artigo em Inglês | VETINDEX | ID: vti-440713

RESUMO

Adjustment of seeding schemes is one of the crop management techniques that most influences grain yield components. This work aimed to characterize the potential grain yield and its components in wheat (Triticum aestivum L.) genotypes with contrasting tillering ability under different seeding densities and environments. Five experiments were conducted in split-plot design, each with ten cultivars (main plot), sown in five distinct seeding densities (subplots). Experiments were sown in three locations in southern Brazil in the years 2005, 2006 and 2007. The grain yield per plot and its yield components: number of fertile tillers, weight of 1,000 grains, ear weight and number of grains per ear were evaluated. Genotypes with reduced tillering ability expressed an increase in grain yield with an increase in seeding densities, however showing a reduction in ear weight. The number of grains per ear did not affect grain yield but was highly influenced by seeding densities. The compensatory effect was expressed by the weight of a thousand grains as a function of the experimental conditions in which the genotypes were evaluated, regardless of seeding densities used. Results pointed to differences among cultivars tested in specific locations and years.

SELEÇÃO DE REFERÊNCIAS
DETALHE DA PESQUISA