RESUMO
The self-assembly of amyloid-beta (Aß) proteins in aqueous extracellular environments is implicated in Alzheimer's disease. Among several alloforms of Aß proteins differing in sequence length, the 42- and 40-residue forms (Aß42 and Aß40) are the most abundant ones in the human body. Although the only difference is the additional I41A42 residues in the C-terminus, Aß42 exhibits more aggregation tendency and stronger neurotoxicity than Aß40. Here, we investigate the molecular factors that confer more aggregation potential to Aß42 than to Aß40 based on molecular dynamics simulations combined with solvation thermodynamic analyses. It is observed that the most salient structural feature of Aß42 relative to Aß40 is the more enhanced ß-sheet forming tendency, in particular in the C-terminal region. While such a structural characteristic of Aß42 will certainly serve to facilitate the formation of aggregate species rich in ß-sheet structure, we also detect its interesting thermodynamic consequence. Indeed, we find from the decomposition analysis that the C-terminal region substantially increases the solvation free energy (i.e., overall "hydrophobicity") of Aß42, which is caused by the dehydration of the backbone moieties showing the enhanced tendency of forming the ß-structure. Together with the two additional hydrophobic residues (I41A42), this leads to the higher solvation free energy of Aß42, implying the larger water-mediated attraction toward the self-assembly. Thus, our computational results provide structural and thermodynamic grounds on why Aß42 has more aggregation propensity than Aß40 in aqueous environments.