Detalhe da pesquisa
1.
AnnoView enables large-scale analysis, comparison, and visualization of microbial gene neighborhoods.
Brief Bioinform
; 25(3)2024 Mar 27.
Artigo
em Inglês
| MEDLINE | ID: mdl-38747283
2.
Genomic classification and antimicrobial resistance profiling of Streptococcus pneumoniae and Haemophilus influenza isolates associated with paediatric otitis media and upper respiratory infection.
BMC Infect Dis
; 23(1): 596, 2023 Sep 13.
Artigo
em Inglês
| MEDLINE | ID: mdl-37700242
3.
PhyloCorrelate: inferring bacterial gene-gene functional associations through large-scale phylogenetic profiling.
Bioinformatics
; 37(1): 17-22, 2021 Apr 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-33416870
4.
Phylogenomics of 8,839 Clostridioides difficile genomes reveals recombination-driven evolution and diversification of toxin A and B.
PLoS Pathog
; 16(12): e1009181, 2020 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-33370413
5.
"From Protein Toxins to Applied Toxicological Testing" virtual workshop identifies the need for a bioinformatic framework to assess novel food protein safety.
Regul Toxicol Pharmacol
; 131: 105146, 2022 Jun.
Artigo
em Inglês
| MEDLINE | ID: mdl-35219763
6.
PathFams: statistical detection of pathogen-associated protein domains.
BMC Genomics
; 22(1): 663, 2021 Sep 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-34521345
7.
Slr4, a newly identified S-layer protein from marine Gammaproteobacteria, is a major biofilm matrix component.
Mol Microbiol
; 114(6): 979-990, 2020 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-32804439
8.
Potentiation of long-acting ß2-agonist and glucocorticoid responses in human airway epithelial cells by modulation of intracellular cAMP.
Respir Res
; 22(1): 266, 2021 Oct 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-34666750
9.
AnnoTree: visualization and exploration of a functionally annotated microbial tree of life.
Nucleic Acids Res
; 47(9): 4442-4448, 2019 05 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-31081040
10.
Predicting the recombination potential of severe acute respiratory syndrome coronavirus 2 and Middle East respiratory syndrome coronavirus.
J Gen Virol
; 101(12): 1251-1260, 2020 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-32902372
11.
Gene expression and in situ protein profiling of candidate SARS-CoV-2 receptors in human airway epithelial cells and lung tissue.
Eur Respir J
; 56(3)2020 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-32675206
12.
Pygenprop: a Python library for programmatic exploration and comparison of organism genome properties.
Bioinformatics
; 35(23): 5063-5065, 2019 12 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-31240307
13.
A study of nitric oxide dynamics in a growing biofilm using a density dependent reaction-diffusion model.
J Theor Biol
; 485: 110053, 2020 01 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-31628906
14.
Lineage-specific mutational clustering in protein structures predicts evolutionary shifts in function.
Bioinformatics
; 33(9): 1338-1345, 2017 05 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-28052926
15.
Agricultural soil denitrifiers possess extensive nitrite reductase gene diversity.
Environ Microbiol
; 19(3): 1189-1208, 2017 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-27943515
16.
mimicMe: a web server for prediction and analysis of host-like proteins in microbial pathogens.
Bioinformatics
; 31(4): 590-2, 2015 Feb 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-25399027
17.
MetAnnotate: function-specific taxonomic profiling and comparison of metagenomes.
BMC Biol
; 13: 92, 2015 Nov 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-26541816
18.
Evaluation of multiple displacement amplification for metagenomic analysis of low biomass samples.
ISME Commun
; 4(1): ycae024, 2024 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-38500705
19.
Nasopharyngeal metatranscriptomics reveals host-pathogen signatures of pediatric sinusitis.
medRxiv
; 2024 Mar 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-38496499
20.
A Machine Learning Framework Identifies Plastid-Encoded Proteins Harboring C3 and C4 Distinguishing Sequence Information.
Genome Biol Evol
; 15(7)2023 07 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-37462292