Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 55
Filtrar
1.
J Biol Chem ; 299(4): 104597, 2023 04.
Artigo em Inglês | MEDLINE | ID: mdl-36898580

RESUMO

Neurospora crassa is an important model organism for circadian clock research. The Neurospora core circadian component FRQ protein has two isoforms, large FRQ (l-FRQ) and small FRQ (s-FRQ), of which l-FRQ bears an additional N-terminal 99-amino acid fragment. However, how the FRQ isoforms operate differentially in regulating the circadian clock remains elusive. Here, we show l-FRQ and s-FRQ play different roles in regulating the circadian negative feedback loop. Compared to s-FRQ, l-FRQ is less stable and undergoes hypophosphorylation and faster degradation. The phosphorylation of the C-terminal l-FRQ 794-aa fragment was markedly higher than that of s-FRQ, suggesting the l-FRQ N-terminal 99-aa region may regulate the phosphorylation of the entire FRQ protein. Quantitative label-free LC/MS analysis identified several peptides that were differentially phosphorylated between l-FRQ and s-FRQ, which were distributed in FRQ in an interlaced fashion. Furthermore, we identified two novel phosphorylation sites, S765 and T781; mutations S765A and T781A showed no significant effects on conidiation rhythmicity, although T781 conferred FRQ stability. These findings demonstrate that FRQ isoforms play differential roles in the circadian negative feedback loop and undergo different regulations of phosphorylation, structure, and stability. The l-FRQ N-terminal 99-aa region plays an important role in regulating the phosphorylation, stability, conformation, and function of the FRQ protein. As the FRQ circadian clock counterparts in other species also have isoforms or paralogues, these findings will also further our understanding of the underlying regulatory mechanisms of the circadian clock in other organisms based on the high conservation of circadian clocks in eukaryotes.


Assuntos
Relógios Circadianos , Proteínas Fúngicas , Ritmo Circadiano/genética , Proteínas Fúngicas/química , Proteínas Fúngicas/metabolismo , Neurospora crassa/genética , Neurospora crassa/metabolismo , Fosforilação , Isoformas de Proteínas/química , Isoformas de Proteínas/genética , Isoformas de Proteínas/metabolismo , Estrutura Terciária de Proteína , Estabilidade Proteica
2.
J Fluoresc ; 2024 Sep 25.
Artigo em Inglês | MEDLINE | ID: mdl-39320630

RESUMO

The hydrothermal method was employed to synthesize a novel bi-ligands LnMOF: Ln(cpioa)phen. The secondary ligand 1, 10-phen serves as a bridging agent to further facilitate energy transfer between Ln ions and the primary ligand H3cpioa. A comparison between Ln(cpioa) MOFs (Ln: Tb3+, Eu3+) and Ln(cpioa)phen MOFs (Ln: Tb3+, Eu3+) reveals that addition of the secondary ligand significantly improves the emission intensity by as high as almost 34 times. After detailed structural study, it is found that different Ln ions have the similar coordination in the Ln(cpioa)phen MOF. In addition, the chromaticity of Ln(cpioa)phen MOFs can be easily tuned by the amounts of doping Ln ions. La0.974Tb0.0255Eu0.0005(cpioa)phen MOF has a white emission with a CIE coordinate of (0.323, 0.343). Characterizations of corresponding LED devices show that device based on Ln(cpioa)phen MOF has better photoluminescence performances, which indicates that Ln(cpioa)phen MOF has great potential of for WLED applications.

3.
Cell ; 138(6): 1236-46, 2009 Sep 18.
Artigo em Inglês | MEDLINE | ID: mdl-19747717

RESUMO

The eukaryotic circadian oscillators consist of autoregulatory negative feedback loops. However, little is known about the role of posttranscriptional regulation of RNA in circadian oscillators. In the Neurospora circadian negative feedback loop, FRQ and FRH form the FFC complex that represses frq transcription. Here, we show that FFC also binds frq RNA and interacts with the exosome to regulate frq RNA decay. Consequently, frq RNA is robustly rhythmic as it is more stable when FRQ levels are low. Silencing of RRP44, the catalytic subunit of the exosome, elevates frq RNA levels and impairs clock function. In addition, rrp44 is a clock-controlled gene and a direct target of the WHITE COLLAR complex, and RRP44 controls the circadian expression of some ccgs. Taken together, these results suggest that FFC and the exosome are part of a posttranscriptional negative feedback loop that regulates frq transcript levels and the circadian output pathway.


Assuntos
Ritmo Circadiano , Exossomos/metabolismo , Regulação Fúngica da Expressão Gênica , Neurospora/genética , Relógios Biológicos , Proteínas Fúngicas/metabolismo , Neurospora/metabolismo , Processamento Pós-Transcricional do RNA
4.
Int J Mol Sci ; 25(5)2024 Feb 22.
Artigo em Inglês | MEDLINE | ID: mdl-38473819

RESUMO

Circadian clocks drive a large array of physiological and behavioral activities. At the molecular level, circadian clocks are composed of positive and negative elements that form core oscillators generating the basic circadian rhythms. Over the course of the circadian period, circadian negative proteins undergo progressive hyperphosphorylation and eventually degrade, and their stability is finely controlled by complex post-translational pathways, including protein modifications, genetic codon preference, protein-protein interactions, chaperon-dependent conformation maintenance, degradation, etc. The effects of phosphorylation on the stability of circadian clock proteins are crucial for precisely determining protein function and turnover, and it has been proposed that the phosphorylation of core circadian clock proteins is tightly correlated with the circadian period. Nonetheless, recent studies have challenged this view. In this review, we summarize the research progress regarding the function, regulation, and mechanism of protein stability in the circadian clock systems of multiple model organisms, with an emphasis on Neurospora crassa, in which circadian mechanisms have been extensively investigated. Elucidation of the highly complex and dynamic regulation of protein stability in circadian clock networks would greatly benefit the integrated understanding of the function, regulation, and mechanism of protein stability in a wide spectrum of other biological processes.


Assuntos
Relógios Circadianos , Neurospora crassa , Proteólise , Processamento de Proteína Pós-Traducional , Fosforilação , Proteínas CLOCK , Ritmo Circadiano , Proteínas Fúngicas
5.
Biochem Biophys Res Commun ; 567: 9-16, 2021 08 27.
Artigo em Inglês | MEDLINE | ID: mdl-34130181

RESUMO

The circadian clock plays a critical role in synchronizing the inner molecular, metabolic and physiological processes to environmental cues that cycle with a period of 24 h. Non-24 h and shift schedules are commonly used in maritime operations, and both of which can disturb circadian rhythms. In this study, we first conducted an experiment in which the volunteers followed a 3-d rotary schedule with consecutive shift in sleep time (rotatory schedule), and analyzed the changes in salivary cortisol rhythms and blood variables. Next we conducted another experiment in which the volunteers followed an 8 h-on and 4-h off schedule (non-24-h schedule) to compare the changes in blood/serum variables. The rotatory schedule led to elevated levels of serum cortisol during the early stage, and the phase became delayed during the early and late stages. Interestingly, both of the schedules caused comprehensive changes in blood/serum biochemical variables and increased phosphate levels. Furthermore, transcriptomic analysis of the plasma miRNAs from the volunteers following the rotatory schedule identified a subset of serum miRNAs targeting genes involved in circadian rhythms, sleep homeostasis, phosphate transport and multiple important physiological processes. Overexpression of miRNAs targeting the phosphate transport associated genes, SLC20A1 and SLC20A2, showed altered expression due to rotary schedule resulted in attenuated cellular levels of phosphate, which might account for the changed levels in serum phosphate. These findings would further our understanding of the deleterious effects of shift schedules and help to optimize and enhance the performances and welfare of personnel working on similar schedules.


Assuntos
Ritmo Circadiano , Hidrocortisona/sangue , MicroRNAs/sangue , Adulto , Relógios Circadianos , Humanos , Masculino , MicroRNAs/genética , Proteínas Cotransportadoras de Sódio-Fosfato Tipo III/genética , Transcriptoma , Regulação para Cima , Adulto Jovem
6.
FASEB J ; 33(6): 6969-6979, 2019 06.
Artigo em Inglês | MEDLINE | ID: mdl-30841753

RESUMO

Most organisms on Earth possess circadian rhythms in their physiology and behaviors that allow them to resonate with the cycling environment over a 24-h period. However, in human society, a substantial quantity of jobs requires non-24-h working and rest or shift schedules, which causes more or less misalignment in circadian rhythms and disorders as a consequence. In this work, we conducted a sleep deprivation (SD) and non-24-h working and rest schedule (8 h on and 4 h off) experiment over 10 d in total and measured the changes in a series of physiologic and cognitive parameters. The results show that although the subjects could sleep during the schedule, their sleepiness increased significantly. Actigraphy data suggest that a 12-h schedule might result in chronic SD. Along with the increased sleepiness revealed by the Karolinska Sleepiness Scale questionnaire, the neurobehavioral psychomotor vigilance test data reveal that, compared with the control period, the reaction time of the subjects was significantly delayed. The saliva insulin levels were significantly changed in the morning in SD and non-24-h cycles. Salivary biochemical parameters were also altered, including aspartate aminotransferase and K+. 16S rRNA-based analysis of the salivary microbiota showed differentially changed patterns in bacteria composition and concentration. Together, these data demonstrate that an abnormal working and rest schedule might produce comprehensive interference with circadian rhythms, metabolism, and cognition.-Ma, H., Li, Y., Liang, H., Chen, S., Pan, S., Chang, L., Li, S., Zhang, Y., Liu, X., Xu, Y., Shao, Y., Yang, Y., Guo, J. Sleep deprivation and a non-24-h working schedule lead to extensive alterations in physiology and behavior.


Assuntos
Ritmo Circadiano/fisiologia , Monitorização Fisiológica , Privação do Sono/fisiopatologia , Tolerância ao Trabalho Programado , Fosfatase Alcalina/metabolismo , Aspartato Aminotransferases/metabolismo , Bactérias/classificação , Cloretos/química , Cloretos/metabolismo , Humanos , Hidrocortisona/química , Hidrocortisona/metabolismo , Comportamento Impulsivo , Insulina/química , Insulina/metabolismo , Masculino , Saliva/química , Saliva/microbiologia , Sono/fisiologia , Sódio/química , Sódio/metabolismo , Ácido Úrico/química , Ácido Úrico/metabolismo , Adulto Jovem
7.
Mol Cell ; 46(3): 299-310, 2012 May 11.
Artigo em Inglês | MEDLINE | ID: mdl-22516970

RESUMO

Argonaute proteins are required for the biogenesis of some small RNAs (sRNAs), including the PIWI-interacting RNAs and some microRNAs. How Argonautes mediate maturation of sRNAs independent of their slicer activity is not clear. The maturation of the Neurospora microRNA-like sRNA, milR-1, requires the Argonaute protein QDE-2, Dicer, and QIP. Here, we reconstitute this Argonaute-dependent sRNA biogenesis pathway in vitro and discover that the RNA exosome is also required for milR-1 production. Our results demonstrate that QDE-2 mediates milR-1 maturation by recruiting exosome and QIP and by determining the size of milR-1. The exonuclease QIP first separates the QDE-2-bound pre-milR-1 duplex and then mediates 3' to 5' trimming and maturation of pre-milRNA together with exosome using a handover mechanism. In addition, exosome is also important for the decay of sRNAs. Together, our results establish a biochemical mechanism of an Argonaute-dependent sRNA biogenesis pathway and critical roles of exosome in sRNA processing.


Assuntos
Proteínas Argonautas/fisiologia , Exorribonucleases/metabolismo , Neurospora crassa/genética , RNA Fúngico/metabolismo , Pequeno RNA não Traduzido/metabolismo , Exorribonucleases/genética , Exorribonucleases/fisiologia , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Proteínas Fúngicas/fisiologia , Precursores de RNA/biossíntese , Precursores de RNA/metabolismo , Ribonuclease III/genética , Ribonuclease III/metabolismo , Ribonuclease III/fisiologia
8.
Nature ; 495(7439): 111-5, 2013 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-23417067

RESUMO

Codon-usage bias has been observed in almost all genomes and is thought to result from selection for efficient and accurate translation of highly expressed genes. Codon usage is also implicated in the control of transcription, splicing and RNA structure. Many genes exhibit little codon-usage bias, which is thought to reflect a lack of selection for messenger RNA translation. Alternatively, however, non-optimal codon usage may be of biological importance. The rhythmic expression and the proper function of the Neurospora FREQUENCY (FRQ) protein are essential for circadian clock function. Here we show that, unlike most genes in Neurospora, frq exhibits non-optimal codon usage across its entire open reading frame. Optimization of frq codon usage abolishes both overt and molecular circadian rhythms. Codon optimization not only increases FRQ levels but, unexpectedly, also results in conformational changes in FRQ protein, altered FRQ phosphorylation profile and stability, and impaired functions in the circadian feedback loops. These results indicate that non-optimal codon usage of frq is essential for its circadian clock function. Our study provides an example of how non-optimal codon usage functions to regulate protein expression and to achieve optimal protein structure and function.


Assuntos
Proteínas CLOCK/genética , Códon/genética , Proteínas Fúngicas/química , Proteínas Fúngicas/metabolismo , Regulação Fúngica da Expressão Gênica , Neurospora crassa , Proteínas CLOCK/química , Proteínas CLOCK/metabolismo , Relógios Circadianos/genética , Relógios Circadianos/fisiologia , Ritmo Circadiano/genética , Ritmo Circadiano/fisiologia , Retroalimentação Fisiológica , Proteínas Fúngicas/genética , Neurospora crassa/química , Neurospora crassa/genética , Neurospora crassa/metabolismo , Fases de Leitura Aberta , Fosforilação , Conformação Proteica , Estabilidade Proteica , Tripsina/metabolismo
9.
J Biol Chem ; 288(43): 31002-9, 2013 Oct 25.
Artigo em Inglês | MEDLINE | ID: mdl-24030828

RESUMO

In the Neurospora circadian negative feedback loop, white collar 1 (WC-1) and WC-2 form the WC complex that activates frequency (frq) transcription. Here we show that Not1 is a WC-interacting protein and is important for maintaining WC levels. The not1 transcript displays a circadian oscillation with a similar phase as frq. Down-regulation of not1 leads to low levels of WC-1 and WC-2 and a delayed circadian phase as a result of increased protein degradation and increased WC activity. Protein purification of Not1 shows that it is part of the Neurospora Ccr4-Not complex. ccr4 is a clock-controlled gene and is regulated directly by the WC complex. Down-regulation of ccr4 results in a phase delay and period lengthening of the clock. Together, our findings suggest that the Ccr4-Not complex participates in the Neurospora clock function by interacting with and regulating the WC complex.


Assuntos
Relógios Circadianos/fisiologia , Proteínas de Ligação a DNA/metabolismo , Proteínas Fúngicas/metabolismo , Complexos Multiproteicos/metabolismo , Neurospora crassa/metabolismo , Proteínas Repressoras/metabolismo , Fatores de Transcrição/metabolismo , Proteínas de Ligação a DNA/genética , Proteínas Fúngicas/genética , Complexos Multiproteicos/genética , Neurospora crassa/genética , Estabilidade Proteica , Proteínas Repressoras/genética , Fatores de Transcrição/genética
10.
J Hazard Mater ; 479: 135740, 2024 Nov 05.
Artigo em Inglês | MEDLINE | ID: mdl-39259990

RESUMO

Occasionally, our group found that the degradation of tetracycline by ferrate(VI) could be promoted by four co-exist contaminants, containing aromatic amines (ofloxacin, diatrizoic acid, sulfadiazine and alachlor). This study investigated the promotion of aromatic amine groups on tetracycline degradation by ferrate(VI) by using aniline as a model compound. The results implied that the presence of aniline increased the degradation rate of tetracycline by 2.76 times, and the enhancement was weakened gradually with the decrease of pH from 10 to 7.5. The generation of Fe(IV) and·OH by the reaction between ferrate(VI) and aniline was proposed to enhance the degradation of tetracycline, supported by quenching experiments, electron paramagnetic resonance (EPR) and theoretical calculations. A positive correlation was found between the rate constant of tetracycline degradation and the electron-donating ability of the substituted amines (quantified by the Hammett substituent constants). In addition, the degradation of tetracycline was remarkably inhibited by HA and some inorganic ions such as NO3-, SO42-, Cl-, Ca2+, and Mg2+, and the inhibition also happened in the Songhua River water and the secondary effluent. The present study provided an insight into the complex oxidation process for the degradation of micropollutants containing aromatic amine by ferrate in water treatment.

11.
Life Sci Space Res (Amst) ; 40: 115-125, 2024 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-38245336

RESUMO

The circadian clock extensively regulates physiology and behavior. In space, astronauts encounter many environmental factors that are dramatically different from those on Earth; however, the effects of these factors on circadian rhythms and the mechanisms remain largely unknown. The present study aimed to investigate the changes in the mouse diurnal rhythm and gut microbiome under simulated space capsule conditions, including microgravity, noise and low atmospheric pressure (LAP). Noise and LAP were loaded in the capsule while the conditions in the animal room remained constant. The mice in the capsule showed disturbed locomotor rhythms and faster adaptation to a 6-h phase advance. RNA sequencing of hypothalamus samples containing the suprachiasmatic nucleus (SCN) revealed that microgravity simulated by hind limb unloading (HU) and exposure to noise and LAP led to decreases in the quantities of differentially expressed genes (DEGs), including circadian clock genes. Changes in the rhythmicity of genes implicated in pathways of cardiovascular deconditioning and more concentrated phases were found under HU or noise and LAP. Furthermore, 16S rRNA sequencing revealed dysbiosis in the gut microbiome, and noise and LAP may repress the temporal discrepancy in the microbiome community structure induced by microgravity. Changes in diurnal oscillations were observed in a number of gut bacteria with critical physiological consequences on metabolism and immunodefense. We also found that the superimposition of noise and LAP may repress normal changes in global gene expression and adaptation in the gut microbiome. Our data demonstrate that in addition to microgravity, exposure to noise and LAP affect the robustness of circadian rhythms and the community structure of the gut microbiome, and these factors may interfere with each other in their adaptation to respective conditions. These findings are important for furthering our understanding of the alterations in circadian rhythms in the complex environment of space.


Assuntos
Microbioma Gastrointestinal , Ausência de Peso , Camundongos , Animais , Ausência de Peso/efeitos adversos , RNA Ribossômico 16S/genética , Ritmo Circadiano/genética , Pressão Atmosférica
12.
Front Sports Act Living ; 6: 1412044, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39005627

RESUMO

Introduction: Sleep loss and sleep deprivation (SD) cause deleterious influences on health, cognition, mood and behaviour. Nevertheless, insufficient sleep and SD are prevalent across many industries and occur in various emergencies. The deleterious consequences of SD have yet to be fully elucidated. This study aimed to assess the extensive influences of SD on physiology, vigilance, and plasma biochemical variables. Methods: Seventeen volunteers were recruited to participate in a 32.5-h SD experiment. Multiple physiological and cognitive variables, including tympanic temperature, blood oxygen saturation (SaO2), and vigilance were recorded. Urinal/salivary samples were collected and subjected to cortisol or cortisone analysis, and plasma samples were subjected to transcriptomic analysis of circular RNA (circRNA) expression using microarray. Plasma neurotransmitters were measured by targeted metabolic analysis, and the levels of inflammatory factors were assessed by antibody microarray. Results: The volunteers showed significantly increased sleepiness and decreased vigilance during SD, and the changes in circadian rhythm and plasma biochemistry were observed. The plasma calcium (p = 0.0007) was induced by SD, while ischaemia-modified albumin (IMA, p = 0.0030) and total bile acid (TBA, p = 0.0157) decreased. Differentially expressed circRNAs in plasma were identified, which are involved in multiple signaling pathways including neuronal regulation and immunity. Accordingly, SD induced a decrease in 3-hydroxybutyric acid (3OBH, p = 0.0002) and an increase in thyroxine (T4, p < 0.0001) in plasma. The plasma anti-inflammatory cytokine IL-10 was downregulated while other ten inflammatory factors were upregulated. Conclusion: This study demonstrates that SD influences biochemical, physiological, cognitive variables, and the significantly changed variables may serve as candidates of SD markers. These findings may further our understanding of the detrimental consequence of sleep disturbance at multiple levels.

13.
Int J Mol Sci ; 14(5): 9018-36, 2013 Apr 25.
Artigo em Inglês | MEDLINE | ID: mdl-23698761

RESUMO

Circadian clocks are internal molecular time-keeping mechanisms that enable organisms to adjust their physiology and behavior to the daily surroundings. Misalignment of circadian clocks leads to both physiological and health impairment. Post-transcriptional regulation and translational regulation of circadian clocks have been extensively investigated. In addition, accumulating evidence has shed new light on the involvement of ribonucleoprotein complexes (RNPs) in the post-transcriptional regulation of circadian clocks. Numerous RNA-binding proteins (RBPs) and RNPs have been implicated in the post-transcriptional modification of circadian clock proteins in different model organisms. Herein, we summarize the advances in the current knowledge on the role of RNP complexes in circadian clock regulation.


Assuntos
Relógios Circadianos , Complexos Multiproteicos/metabolismo , Ribonucleoproteínas/metabolismo , Transporte Ativo do Núcleo Celular/genética , Processamento Alternativo/genética , Animais , Relógios Circadianos/genética , Humanos , Poliadenilação/genética , RNA Mensageiro/genética , RNA Mensageiro/metabolismo
14.
Anal Methods ; 15(10): 1254-1260, 2023 Mar 09.
Artigo em Inglês | MEDLINE | ID: mdl-36843536

RESUMO

In situ monitoring of chemical reactions has attracted great attention in many fields. Herein, we successfully in situ track the degradation reaction process of a dye pollutant, methylene blue (MB), on the liquid-liquid interface (LLI) of bimetallic gold core-silver shell nanoparticles (Au@AgNPs) by surface-enhanced Raman spectroscopy (SERS). The optimized LLI bimetallic array of Au50@Ag10NPs exhibits ultrahigh SERS enhancement and excellent catalytic activity. Results evidenced a detection limit of MB down to 1 ppb, and the degradation rate of Au@AgNPs was as high as 85.2% in 30 s, relying on the excellent self-healing properties of nanoarrays. Furthermore, as a practical SERS analyzer, the LLI bimetallic array was used to detect trace amounts of other harmful dyes, including Rhodamine 6G (R6G) and crystal violet (CV) in pure or complex media. Our LLI bimetallic array exhibits a new orientation for monitoring catalytic reactions involving highly toxic, hazardous, or costly targets in food security fields in the future.

15.
J Microbiol ; 61(2): 233-243, 2023 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-36757583

RESUMO

The use of antibiotics can disrupt the body's natural balance and increase the susteptibility of patients towards fungal infections. Candida albicans is a dimorphic opportunistic fungal pathogen with niches similar to those of bacteria. Our aim was to study the interaction between this pathogen and bacteria to facilitate the control of C. albicans infection. Alpha-hemolysin (Hla), a protein secreted from Staphylococcus aureus, causes cell wall damage and impedes the yeast-hyphae transition in C. albicans. Mechanistically, Hla stimulation triggered the formation of reactive oxygen species that damaged the cell wall and mitochondria of C. albicans. The cell cycle was arrested in the G0/G1 phase, CDC42 was downregulated, and Ywp1 was upregulated, disrupting yeast hyphae switching. Subsequently, hyphae development was inhibited. In mouse models, C. albicans pretreated with Hla reduced the C. albicans burden in skin and vaginal mucosal infections, suggesting that S. aureus Hla can inhibit hyphal development and reduce the pathogenicity of candidiasis in vivo.


Assuntos
Candida albicans , Infecções Estafilocócicas , Camundongos , Animais , Feminino , Candida albicans/metabolismo , Staphylococcus aureus/metabolismo , Proteínas Hemolisinas/genética , Proteínas Hemolisinas/metabolismo , Hifas , Virulência , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo
16.
Elife ; 122023 04 21.
Artigo em Inglês | MEDLINE | ID: mdl-37083494

RESUMO

Circadian clocks are evolved to adapt to the daily environmental changes under different conditions. The ability to maintain circadian clock functions in response to various stresses and perturbations is important for organismal fitness. Here, we show that the nutrient-sensing GCN2 signaling pathway is required for robust circadian clock function under amino acid starvation in Neurospora. The deletion of GCN2 pathway components disrupts rhythmic transcription of clock gene frq by suppressing WC complex binding at the frq promoter due to its reduced histone H3 acetylation levels. Under amino acid starvation, the activation of GCN2 kinase and its downstream transcription factor CPC-1 establish a proper chromatin state at the frq promoter by recruiting the histone acetyltransferase GCN-5. The arrhythmic phenotype of the GCN2 kinase mutants under amino acid starvation can be rescued by inhibiting histone deacetylation. Finally, genome-wide transcriptional analysis indicates that the GCN2 signaling pathway maintains robust rhythmic expression of metabolic genes under amino acid starvation. Together, these results uncover an essential role of the GCN2 signaling pathway in maintaining the robust circadian clock function in response to amino acid starvation, and demonstrate the importance of histone acetylation at the frq locus in rhythmic gene expression.


Assuntos
Relógios Circadianos , Neurospora crassa , Acetilação , Aminoácidos/metabolismo , Relógios Circadianos/genética , Ritmo Circadiano/genética , Proteínas Fúngicas/metabolismo , Regulação Fúngica da Expressão Gênica , Histonas/metabolismo , Neurospora crassa/genética , Nutrientes , Transdução de Sinais
17.
Hepatology ; 54(4): 1410-20, 2011 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-21725993

RESUMO

UNLABELLED: Many aspects of energy metabolism, including glucose and lipid homeostasis and mitochondrial oxidative metabolism, are under precise control by the mammalian circadian clock. However, the molecular mechanism for coordinate integration of the circadian clock and various metabolic pathways is poorly understood. Here we show that BAF60a, a chromatin-remodeling complex subunit, is rhythmically expressed in the liver of mice. Mice with liver-specific knockdown of BAF60a show abnormalities in the rhythmic expression pattern of clock and metabolic genes and in the circulating metabolite profile. Consistently, knockdown of BAF60a impairs the oscillation of clock genes in serum-shocked HepG(2) cells. At the molecular level, BAF60a activates Bmal1 and G6Pase transcription by way of the coactivation of retinoid-related orphan receptor alpha (RORα). In addition, BAF60a is present near ROR response elements (RORE) on the proximal Bmal1 and G6Pase promoters and turns the chromatin structure into the active state. CONCLUSION: Our data suggest a critical role for BAF60a in the coordinated regulation of hepatic circadian clock and energy metabolism in mammals.


Assuntos
Relógios Circadianos/genética , Proteínas de Ligação a DNA/metabolismo , Metabolismo Energético/genética , Glucose-6-Fosfatase/metabolismo , Fatores de Transcrição/metabolismo , Animais , Imunoprecipitação da Cromatina , Proteínas de Ligação a DNA/genética , Regulação da Expressão Gênica , Glucose-6-Fosfatase/genética , Humanos , Masculino , Camundongos , Camundongos Endogâmicos C57BL , RNA Mensageiro/metabolismo , Distribuição Aleatória , Reação em Cadeia da Polimerase em Tempo Real , Valores de Referência , Sacarose/metabolismo , Técnicas de Cultura de Tecidos , Transativadores/genética , Transativadores/metabolismo , Fatores de Transcrição/genética
18.
Chronobiol Int ; 39(9): 1285-1296, 2022 09.
Artigo em Inglês | MEDLINE | ID: mdl-35844159

RESUMO

Accumulating data have demonstrated that shift work causes a disturbance in circadian rhythms, which is detrimental to physiology and performance. However, the detailed effects of shift work and especially the underlying mechanisms remain to be further investigated. Frequently shifting schedules are widely used in industries, e.g., maritime tasks, oil mining, and aviation. In this work, we investigated the physiological changes and vigilance of 12 subjects who lived on a 30-day frequent shift working schedule in a confined environment, which mimics the common maritime schedules. Elevated and decreased cortisol levels were observed at different stages during the shift, suggesting the occurrence of stress and fatigue. The results of the Karolinska Sleepiness Scale (KSS) indicate increased sleepiness and a changed pattern of the rhythmicity of sleepiness during the shift. The tests of the Psychomotor Vigilance Task (PVT) reveal that the shift led to a continuously decreasing alertness as the shift working schedule progressed, which is prevalently due to the increasingly slower reaction speed. The PVT time-out errors were significantly increased in the early period but decreased in the late period. In addition, we found recoupling of the correlations between multiple physiological and cognitive variables. For instance, heartbeat rate (HR) and breath rate (BR) showed moderate correlations in the control and early periods but little in the late period. Together, these results reveal substantial alterations in diurnal rhythms, affected vigilance and changed coupling of the correlations of diurnal rhythms, physiology and cognition caused by a shift schedule. Our findings may help in the recognition of the detrimental effects of such working schedules and provide clues for the development of potential mitigations.


Assuntos
Ritmo Circadiano , Tolerância ao Trabalho Programado , Ritmo Circadiano/fisiologia , Fadiga , Humanos , Sono/fisiologia , Sonolência , Vigília/fisiologia , Tolerância ao Trabalho Programado/fisiologia
19.
J Biol Chem ; 285(15): 11508-15, 2010 Apr 09.
Artigo em Inglês | MEDLINE | ID: mdl-20159972

RESUMO

FREQUENCY (FRQ) is the central component of the Neurospora circadian clock. All FRQ proteins form the FFC complex with FRH (FRQ-interacting RNA helicase) that acts as the negative element in the circadian negative feedback loop by repressing frq mRNA levels. To understand the function of the FRQ-FRH interaction, we mapped and identified the minimal FRQ region that is required for FRQ-FRH interaction. We demonstrated that the FRQ-FRH complex formation is required for the interaction between FRQ and the White Collar Complex (WCC) and clock function. On the other hand, in the FRQ-FRH complex, FRQ is also required for the FRH-WCC interaction. Disruption of FRQ-FRH interaction or down-regulation of FRH results in hypophosphorylation, rapid degradation of FRQ, as well as low levels of WHITE COLLAR-1 and WHITE COLLAR-2. Furthermore, we showed that the rapid FRQ degradation in the absence of FRH is independent of FWD-1, the ubiquitin E3 ligase of FRQ under normal conditions, thus uncovering an alternative pathway for FRQ degradation.


Assuntos
Proteínas Fúngicas/metabolismo , Regulação Fúngica da Expressão Gênica , Neurospora/metabolismo , RNA Helicases/metabolismo , Sequência de Aminoácidos , Ritmo Circadiano , Inativação Gênica , Modelos Biológicos , Modelos Genéticos , Dados de Sequência Molecular , Mutação , Fosforilação , Plasmídeos/metabolismo , Homologia de Sequência de Aminoácidos , Ubiquitina-Proteína Ligases/metabolismo
20.
J Fungi (Basel) ; 8(1)2021 Dec 29.
Artigo em Inglês | MEDLINE | ID: mdl-35049967

RESUMO

Circadian clocks control the physiological and behavioral rhythms to adapt to the environment with a period of ~24 h. However, the influences and mechanisms of the extreme light/dark cycles on the circadian clock remain unclear. We showed that, in Neurospora crassa, both the growth and the microconidia production contribute to adaptation in LD12:12 (12 h light/12 h dark, periodically). Mathematical modeling and experiments demonstrate that in short LD cycles, the expression of the core clock protein FREQUENCY was entrained to the LD cycles when LD > 3:3 while it free ran when T ≤ LD3:3. The conidial rhythmicity can resonate with a series of different LD conditions. Moreover, we demonstrate that the existence of unknown blue light photoreceptor(s) and the circadian clock might promote the conidiation rhythms that resonate with the environment. The ubiquitin E3 ligase FWD-1 and the previously described CRY-dependent oscillator system were implicated in regulating conidiation under short LD conditions. These findings shed new light on the resonance of Neurospora circadian clock and conidiation rhythms to short LD cycles, which may benefit the understandings of both the basic regulatory aspects of circadian clock and the adaptation of physiological rhythms to the extreme conditions.

SELEÇÃO DE REFERÊNCIAS
DETALHE DA PESQUISA