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1.
Biophys J ; 101(1): 188-95, 2011 Jul 06.
Artigo em Inglês | MEDLINE | ID: mdl-21723829

RESUMO

F(1)-ATPase is an ATP-driven rotary molecular motor in which the central γ-subunit rotates inside a cylinder made of α(3)ß(3) subunits. The amino and carboxyl termini of the γ rotor form a coiled coil of α-helices that penetrates the stator cylinder to serve as an axle. Crystal structures indicate that the axle is supported by the stator at two positions, at the orifice and by the hydrophobic sleeve surrounding the axle tip. The sleeve contacts are almost exclusively to the longer carboxyl-terminal helix, whereas nearly half the orifice contacts are to the amino-terminal helix. Here, we truncated the amino-terminal helix stepwise up to 50 residues, removing one half of the axle all the way up and far beyond the orifice. The half-sliced axle still rotated with an unloaded speed a quarter of the wild-type speed, with torque nearly half the wild-type torque. The truncations were made in a construct where the rotor tip was connected to a ß-subunit via a short peptide linker. Linking alone did not change the rotational characteristics significantly. These and previous results show that nearly half the normal torque is generated if rotor-stator interactions either at the orifice or at the sleeve are preserved, suggesting that the make of the motor is quite robust.


Assuntos
ATPases Translocadoras de Prótons/química , Torque , Trifosfato de Adenosina/metabolismo , Sequência de Aminoácidos , Animais , Bovinos , Eletroforese em Gel de Poliacrilamida , Ouro , Hidrólise , Microesferas , Modelos Moleculares , Dados de Sequência Molecular , Proteínas Mutantes/química , Tamanho da Partícula , Estrutura Secundária de Proteína , Subunidades Proteicas/química , Reprodutibilidade dos Testes , Rotação
2.
Biochim Biophys Acta ; 1797(4): 435-42, 2010 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-20044971

RESUMO

F(1)-ATPase is a rotary molecular motor in which the gamma subunit rotates inside the cylinder made of alpha(3)beta(3) subunits. We have studied the effects of sodium dodecyl sulfate (SDS) on the rotational and ATP hydrolysis activities of F(1)-ATPase. Bulk hydrolysis activity at various SDS concentrations was examined at 2mM ATP. Maximal stimulation was obtained at 0.003% (w/v) SDS, the initial (least inhibited) activity being about 1.4 times and the steady-state activity 3-4 times the values in the absence of SDS. Rotation rates observed with a 40-nm gold bead or a 0.29-mum bead duplex as well as the torque were unaffected by the presence of 0.003% SDS. The fraction of beads that rotated, in contrast, tended to increase in the presence of SDS. SDS seems to bring inactive F(1) molecules into an active form but it does not alter or enhance the function of already active F(1) molecules significantly.


Assuntos
Trifosfato de Adenosina/metabolismo , Proteínas de Bactérias/metabolismo , ATPases Translocadoras de Prótons/metabolismo , Dodecilsulfato de Sódio/farmacologia , Trifosfato de Adenosina/química , Bacillus/enzimologia , Proteínas de Bactérias/química , Hidrólise/efeitos dos fármacos , Cinética , ATPases Translocadoras de Prótons/química
3.
Biophys J ; 95(10): 4837-44, 2008 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-18708468

RESUMO

F(1)-ATPase is an ATP-driven rotary molecular motor in which the central gamma-subunit rotates inside the cylinder made of alpha(3)beta(3) subunits. The amino and carboxy termini of the gamma-subunit form the axle, an alpha-helical coiled coil that deeply penetrates the stator cylinder. We previously truncated the axle step by step, starting with the longer carboxy terminus and then cutting both termini at the same levels, resulting in a slower yet considerably powerful rotation. Here we examine the role of each helix by truncating only the carboxy terminus by 25-40 amino-acid residues. Longer truncation impaired the stability of the motor complex severely: 40 deletions failed to yield rotating the complex. Up to 36 deletions, however, the mutants produced an apparent torque at nearly half of the wild-type torque, independent of truncation length. Time-averaged rotary speeds were low because of load-dependent stumbling at 120 degrees intervals, even with saturating ATP. Comparison with our previous work indicates that half the normal torque is produced at the orifice of the stator. The very tip of the carboxy terminus adds the other half, whereas neither helix in the middle of the axle contributes much to torque generation and the rapid progress of catalysis. None of the residues of the entire axle played a specific decisive role in rotation.


Assuntos
Trifosfato de Adenosina/química , Modelos Químicos , Modelos Moleculares , Proteínas Motores Moleculares/química , Proteínas Motores Moleculares/ultraestrutura , ATPases Translocadoras de Prótons/química , ATPases Translocadoras de Prótons/ultraestrutura , Simulação por Computador , Movimento (Física) , Mutagênese Sítio-Dirigida , Conformação Proteica , Estrutura Terciária de Proteína , Torque
4.
Science ; 319(5865): 955-8, 2008 Feb 15.
Artigo em Inglês | MEDLINE | ID: mdl-18276891

RESUMO

F1-adenosine triphosphatase (ATPase) is an ATP-driven rotary molecular motor in which the central gamma subunit rotates inside a cylinder made of three alpha and three beta subunits alternately arranged. The rotor shaft, an antiparallel alpha-helical coiled coil of the amino and carboxyl termini of the gamma subunit, deeply penetrates the central cavity of the stator cylinder. We truncated the shaft step by step until the remaining rotor head would be outside the cavity and simply sat on the concave entrance of the stator orifice. All truncation mutants rotated in the correct direction, implying torque generation, although the average rotary speeds were low and short mutants exhibited moments of irregular motion. Neither a fixed pivot nor a rigid axle was needed for rotation of F1-ATPase.


Assuntos
Proteínas Motores Moleculares/química , ATPases Translocadoras de Prótons/química , ATPases Translocadoras de Prótons/metabolismo , Trifosfato de Adenosina/metabolismo , Sequência de Aminoácidos , Hidrólise , Microesferas , Proteínas Motores Moleculares/metabolismo , Dados de Sequência Molecular , Proteínas Mutantes/química , Mutação , Conformação Proteica , Subunidades Proteicas/química , Subunidades Proteicas/metabolismo , ATPases Translocadoras de Prótons/genética , Rotação , Torque
5.
Biophys J ; 90(11): 4195-203, 2006 Jun 01.
Artigo em Inglês | MEDLINE | ID: mdl-16698789

RESUMO

F(1)-ATPase is an ATP-driven rotary molecular motor in which the central gamma-subunit rotates inside a stator cylinder made of alpha(3)beta(3) subunits. To elucidate the role of rotor-stator interactions in torque generation, we truncated the gamma-subunit at its carboxyl terminus, which forms an alpha helix that penetrates deeply into the stator cylinder. We used an alpha(3)beta(3)gamma subcomplex of F(1)-ATPase derived from thermophilic Bacillus PS3 and expressed it in Escherichia coli. We could obtain purified subcomplexes in which 14, 17, or 21 amino-acid residues were deleted. The rotary characteristics of the truncated mutants, monitored by attaching a duplex of 0.49-microm beads to the gamma-subunit, did not differ greatly from those of the wild-type over the ATP concentrations of 20 nM-2 mM, the most conspicuous effect being approximately 50% reduction in torque and approximately 70% reduction in the rate of ATP binding upon deletion of 21 residues. The ATP hydrolysis activity estimated in bulk samples was more seriously affected. The 21-deletion mutant, in particular, was >10-fold less active, but this is likely due to instability of this subcomplex. For torque generation, though not for rapid catalysis, most of the rotor-stator contacts on the deeper half of the penetrating portion of the gamma-subunit are dispensable.


Assuntos
Modelos Moleculares , Proteínas Motores Moleculares/química , ATPases Translocadoras de Prótons/química , Bacillus/química , Domínio Catalítico , Proteínas Motores Moleculares/genética , Mutação , Ligação Proteica , Conformação Proteica , Subunidades Proteicas/química , Subunidades Proteicas/genética , ATPases Translocadoras de Prótons/genética , Proteínas Recombinantes/química , Torque
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