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1.
Nucleic Acids Res ; 45(11): 6894-6910, 2017 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-28472401

RESUMO

RNA-binding proteins (RBPs) are involved in mRNA splicing, maturation, transport, translation, storage and turnover. Here, we identified ACOT7 mRNA as a novel target of human WIG1. ACOT7 mRNA decay was triggered by the microRNA miR-9 in a WIG1-dependent manner via classic recruitment of Argonaute 2 (AGO2). Interestingly, AGO2 was also recruited to ACOT7 mRNA in a WIG1-dependent manner in the absence of miR-9, which indicates an alternative model whereby WIG1 controls AGO2-mediated gene silencing. The WIG1-AGO2 complex attenuated translation initiation via an interaction with translation initiation factor 5B (eIF5B). These results were confirmed using a WIG1 tethering system based on the MS2 bacteriophage coat protein and a reporter construct containing an MS2-binding site, and by immunoprecipitation of WIG1 and detection of WIG1-associated proteins using liquid chromatography-tandem mass spectrometry. We also identified WIG1-binding motifs using photoactivatable ribonucleoside-enhanced crosslinking and immunoprecipitation analyses. Altogether, our data indicate that WIG1 governs the miRNA-dependent and the miRNA-independent recruitment of AGO2 to lower the stability of and suppress the translation of ACOT7 mRNA.


Assuntos
Proteínas Argonautas/fisiologia , Proteínas de Transporte/fisiologia , MicroRNAs/fisiologia , Proteínas Nucleares/fisiologia , Interferência de RNA , RNA Mensageiro/metabolismo , Regiões 3' não Traduzidas , Sequência de Bases , Sítios de Ligação , Fatores de Iniciação em Eucariotos/metabolismo , Células HCT116 , Células HEK293 , Humanos , Sequências Repetidas Invertidas , Células MCF-7 , Ligação Proteica , Biossíntese de Proteínas , Domínios Proteicos , Estabilidade de RNA , RNA Mensageiro/genética , Proteínas de Ligação a RNA
2.
Nucleic Acids Res ; 43(13): 6321-33, 2015 Jul 27.
Artigo em Inglês | MEDLINE | ID: mdl-26068472

RESUMO

DNA double-strand breaks (DSBs) are the most severe type of DNA damage and are primarily repaired by non-homologous end joining (NHEJ) and homologous recombination (HR) in the G1 and S/G2 phase, respectively. Although CtBP-interacting protein (CtIP) is crucial in DNA end resection during HR following DSBs, little is known about how CtIP levels increase in an S phase-specific manner. Here, we show that Serpine mRNA binding protein 1 (SERBP1) regulates CtIP expression at the translational level in S phase. In response to camptothecin-mediated DNA DSBs, CHK1 and RPA2 phosphorylation, which are hallmarks of HR activation, was abrogated in SERBP1-depleted cells. We identified CtIP mRNA as a binding target of SERBP1 using RNA immunoprecipitation-coupled RNA sequencing, and confirmed SERBP1 binding to CtIP mRNA in S phase. SERBP1 depletion resulted in reduction of polysome-associated CtIP mRNA and concomitant loss of CtIP expression in S phase. These effects were reversed by reconstituting cells with wild-type SERBP1, but not by SERBP1 ΔRGG, an RNA binding defective mutant, suggesting regulation of CtIP translation by SERBP1 association with CtIP mRNA. These results indicate that SERBP1 affects HR-mediated DNA repair in response to DNA DSBs by regulation of CtIP translation in S phase.


Assuntos
Proteínas de Transporte/biossíntese , Regulação da Expressão Gênica , Proteínas Nucleares/biossíntese , Biossíntese de Proteínas , Proteínas de Ligação a RNA/metabolismo , Reparo de DNA por Recombinação , Fase S/genética , Regiões 3' não Traduzidas , Proteínas Mutadas de Ataxia Telangiectasia/metabolismo , Proteínas de Transporte/genética , Proteínas de Transporte/metabolismo , Linhagem Celular , Quebras de DNA de Cadeia Dupla , Reparo do DNA , Endodesoxirribonucleases , Células HeLa , Humanos , Proteínas Nucleares/genética , Proteínas Nucleares/metabolismo , RNA Mensageiro/metabolismo , Proteínas de Ligação a RNA/fisiologia , Transdução de Sinais
3.
Biochem Biophys Res Commun ; 470(2): 431-438, 2016 Feb 05.
Artigo em Inglês | MEDLINE | ID: mdl-26773498

RESUMO

Gene expression is regulated at multiple steps, such as transcription, splicing, export, degradation and translation. Considering diverse roles of SR proteins, we determined whether the tumor-related splicing factor SRSF3 regulates the expression of the tumor-suppressor protein, PDCD4, at multiple steps. As we have reported previously, knockdown of SRSF3 increased the PDCD4 protein level in SW480 colon cancer cells. More interestingly, here we showed that the alternative splicing and the nuclear export of minor isoforms of pdcd4 mRNA were repressed by SRSF3, but the translation step was unaffected. In contrast, only the translation step of the major isoform of pdcd4 mRNA was repressed by SRSF3. Therefore, overexpression of SRSF3 might be relevant to the repression of all isoforms of PDCD4 protein levels in most types of cancer cell. We propose that SRSF3 could act as a coordinator of the expression of PDCD4 protein via two mechanisms on two alternatively spliced mRNA isoforms.


Assuntos
Processamento Alternativo/fisiologia , Proteínas Reguladoras de Apoptose/metabolismo , Regulação da Expressão Gênica/fisiologia , Biossíntese de Proteínas/fisiologia , Processamento de Proteína Pós-Traducional/fisiologia , Proteínas de Ligação a RNA/metabolismo , Linhagem Celular Tumoral , Regulação para Baixo/fisiologia , Humanos , Fatores de Processamento de Serina-Arginina , Frações Subcelulares/metabolismo
4.
Biochem Biophys Res Commun ; 457(1): 65-70, 2015 Jan 30.
Artigo em Inglês | MEDLINE | ID: mdl-25534855

RESUMO

ß-Catenin is the key transcriptional activator of canonical Wnt signaling in the nucleus; thus, nuclear accumulation of ß-catenin is a critical step for expressing target genes. ß-Catenin accumulates in the nucleus of cancer cells where it activates oncogenic target genes. Hu antigen R (HuR) is a RNA binding protein that regulates multiple post-transcriptional processes including RNA stability. Thus, cytoplasmic HuR protein may be involved in tumorigenesis by stabilizing oncogenic transcripts, but the molecular mechanism remains unclear. Here, we observed that Wnt/ß-catenin signaling induced export of the HuR protein, whereas HuR overexpression promoted accumulation of the ß-catenin protein in the cytoplasm. Thus, Wnt/ß-catenin-mediated transcriptional activity in the nucleus was reduced by overexpressing HuR. These results suggest novel and uncharacterized cytoplasmic ß-catenin functions related to HuR-mediated RNA metabolism in cancer cells.


Assuntos
Citoplasma/metabolismo , Proteínas ELAV/metabolismo , Ativação Transcricional , Via de Sinalização Wnt , beta Catenina/metabolismo , Linhagem Celular , Citoplasma/efeitos dos fármacos , Proteína Semelhante a ELAV 1 , Humanos , Cloreto de Lítio/farmacologia , Modelos Biológicos , Estabilidade Proteica/efeitos dos fármacos , Transporte Proteico/efeitos dos fármacos , Fatores de Transcrição TCF/metabolismo , Transcrição Gênica/efeitos dos fármacos , Ativação Transcricional/efeitos dos fármacos , Via de Sinalização Wnt/efeitos dos fármacos
5.
Eur J Nucl Med Mol Imaging ; 41(8): 1534-43, 2014 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-24652232

RESUMO

PURPOSE: Imaging biomarkers from functional imaging modalities were assessed as potential surrogate markers of disease status. Specifically, in this prospective study, we investigated the relationships between functional imaging parameters and histological prognostic factors and breast cancer subtypes. METHODS: In total, 43 patients with large or locally advanced invasive ductal carcinoma (IDC) were analyzed (47.6 ± 7.5 years old). (68)Ga-Labeled arginine-glycine-aspartic acid (RGD) and (18)F-fluorodeoxyglucose (FDG) positron emission tomography/computed tomography (PET/CT) were performed. The maximum and average standardized uptake values (SUVmax and SUVavg) from RGD PET/CT and SUVmax and SUVavg from FDG PET/CT were the imaging parameters used. For histological prognostic factors, estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor 2 (HER2) expression was identified using immunohistochemistry (IHC) or fluorescent in situ hybridization (FISH). Four breast cancer subtypes, based on ER/PR and HER2 expression (ER/PR+,Her2-, ER/PR+,Her2+, ER/PR-,Her2+, and ER/PR-,Her2-), were considered. RESULTS: Quantitative FDG PET parameters were significantly higher in the ER-negative group (15.88 ± 8.73 vs 10.48 ± 6.01, p = 0.02 for SUVmax; 9.40 ± 5.19 vs 5.92 ± 4.09, p = 0.02 for SUVavg) and the PR-negative group (8.37 ± 4.94 vs 4.79 ± 3.93, p = 0.03 for SUVavg). Quantitative RGD PET parameters were significantly higher in the HER2-positive group (2.42 ± 0.59 vs 2.90 ± 0.75, p = 0.04 for SUVmax; 1.60 ± 0.38 vs 1.95 ± 0.53, p = 0.04 for SUVavg) and showed a significant positive correlation with the HER2/CEP17 ratio (r = 0.38, p = 0.03 for SUVmax and r = 0.46, p < 0.01 for SUVavg). FDG PET parameters showed significantly higher values in the ER/PR-,Her2- subgroup versus the ER/PR+,Her2- or ER/PR+,Her2+ subgroups, while RGD PET parameters showed significantly lower values in the ER/PR-,Her2- subgroup versus the other subgroups. There was no correlation between FDG and RGD PET parameters in the overall group. Only the ER/PR-,Her2- subgroup showed a significant positive correlation between FDG and RGD PET parameters (r = 0.59, p = 0.03 for SUVmax). CONCLUSION: (68)Ga-RGD and (18)F-FDG PET/CT are promising functional imaging modalities for predicting biomarkers and molecular phenotypes in breast cancer patients.


Assuntos
Biomarcadores Tumorais/genética , Neoplasias da Mama/diagnóstico , Carcinoma Ductal de Mama/diagnóstico , Tomografia por Emissão de Pósitrons , Receptor ErbB-2/genética , Receptores de Estrogênio/genética , Receptores de Progesterona/genética , Adulto , Biomarcadores Tumorais/metabolismo , Neoplasias da Mama/diagnóstico por imagem , Neoplasias da Mama/genética , Carcinoma Ductal de Mama/diagnóstico por imagem , Carcinoma Ductal de Mama/genética , Complexos de Coordenação , Feminino , Fluordesoxiglucose F18 , Humanos , Pessoa de Meia-Idade , Imagem Multimodal , Oligopeptídeos , Compostos Radiofarmacêuticos , Receptor ErbB-2/metabolismo , Receptores de Estrogênio/metabolismo , Receptores de Progesterona/metabolismo , Tomografia Computadorizada por Raios X
6.
Nucleic Acids Res ; 40(14): 6863-72, 2012 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-22544606

RESUMO

RNA-binding proteins regulate multiple steps of RNA metabolism through both dynamic and combined binding. In addition to its crucial roles in cell adhesion and Wnt-activated transcription in cancer cells, ß-catenin regulates RNA alternative splicing and stability possibly by binding to target RNA in cells. An RNA aptamer was selected for specific binding to ß-catenin to address RNA recognition by ß-catenin more specifically. Here, we characterized the structural properties of the RNA aptamer as a model and identified a ß-catenin RNA motif. Similar RNA motif was found in cellular RNA, Cyclooxygenase-2 (COX-2) mRNA 3'-untranslated region (3'-UTR). More significantly, the C-terminal domain of ß-catenin interacted with HuR and the Armadillo repeat domain associated with RNA to form the RNA-ß-catenin-HuR complex in vitro and in cells. Furthermore, the tertiary RNA-protein complex was predominantly found in the cytoplasm of colon cancer cells; thus, it might be related to COX-2 protein level and cancer progression. Taken together, the ß-catenin RNA aptamer was valuable for deducing the cellular RNA aptamer and identifying novel and oncogenic RNA-protein networks in colon cancer cells.


Assuntos
Regiões 3' não Traduzidas , Neoplasias do Colo/metabolismo , Ciclo-Oxigenase 2/genética , Proteínas ELAV/metabolismo , Proteínas de Ligação a RNA/metabolismo , beta Catenina/metabolismo , Aptâmeros de Nucleotídeos/química , Sítios de Ligação , Linhagem Celular Tumoral , Neoplasias do Colo/genética , Células HEK293 , Humanos , Motivos de Nucleotídeos , Domínios e Motivos de Interação entre Proteínas , RNA Mensageiro/química , Proteínas de Ligação a RNA/química , beta Catenina/química
7.
J Biol Chem ; 287(49): 41364-73, 2012 Nov 30.
Artigo em Inglês | MEDLINE | ID: mdl-23086933

RESUMO

Vascular endothelial growth factor A (VEGFA) mRNA is regulated by ß-catenin and peroxisome proliferator activated receptor δ (PPAR-δ) activation in colon cancer cells, but the detailed mechanism remains to be elucidated. As chromatin loops are generally hubs for transcription factors, we tested here whether ß-catenin could modulate chromatin looping near the VEGFA gene and play any important role for PPAR-δ activated VEGFA transcription. First, we identified the far upstream site as an important site for VEGFA transcription by luciferase assay and chromatin immunoprecipitation in colorectal carcinoma HCT116 cells. Chromatin conformation capture analysis also revealed the chromatin loops formed by the ß-catenin bindings on these sites near the VEGFA gene. Dynamic association and dissociation of ß-catenin/TCF-4/PPAR-δ on the far upstream site and ß-catenin/NF-κB p65 on the downstream site were also detected depending on PPAR-δ activation. Interestingly, ß-catenin-mediated chromatin loops were relieved by PPAR-δ activation, suggesting a regulatory role of ß-catenin for VEGFA transcription. Based on these data, we propose a model for PPAR-δ-activated VEGFA transcription that relies on ß-catenin-mediated chromatin looping as a prerequisite for the activation. Our findings could extend to other ß-catenin regulated target genes and could provide a general mechanism and novel paradigm for ß-catenin-mediated oncogenesis.


Assuntos
Cromatina/metabolismo , Neoplasias do Colo/metabolismo , Regulação Neoplásica da Expressão Gênica , PPAR delta/metabolismo , Fator A de Crescimento do Endotélio Vascular/biossíntese , beta Catenina/metabolismo , Fatores de Transcrição de Zíper de Leucina e Hélice-Alça-Hélix Básicos/metabolismo , Linhagem Celular Tumoral , Cromatina/química , Humanos , Modelos Biológicos , Mutagênese , Ligação Proteica , Fator de Transcrição 4 , Fatores de Transcrição/metabolismo , Transcrição Gênica
8.
Mol Cells ; 46(1): 48-56, 2023 Jan 31.
Artigo em Inglês | MEDLINE | ID: mdl-36697237

RESUMO

Genomic information stored in the DNA is transcribed to the mRNA and translated to proteins. The 3' untranslated regions (3'UTRs) of the mRNA serve pivotal roles in posttranscriptional gene expression, regulating mRNA stability, translation, and localization. Similar to DNA mutations producing aberrant proteins, RNA alterations expand the transcriptome landscape and change the cellular proteome. Recent global analyses reveal that many genes express various forms of altered RNAs, including 3'UTR length variants. Alternative polyadenylation and alternative splicing are involved in diversifying 3'UTRs, which could act as a hidden layer of eukaryotic gene expression control. In this review, we summarize the functions and regulations of 3'UTRs and elaborate on the generation and functional consequences of 3'UTR diversity. Given that dynamic 3'UTR length control contributes to phenotypic complexity, dysregulated 3'UTR diversity might be relevant to disease development, including cancers. Thus, 3'UTR diversity in cancer could open exciting new research areas and provide avenues for novel cancer theragnostics.


Assuntos
Poliadenilação , Transcriptoma , Humanos , Regiões 3' não Traduzidas/genética , RNA Mensageiro/genética , Poliadenilação/genética , Processamento Alternativo/genética
9.
Cell Death Dis ; 13(11): 933, 2022 11 07.
Artigo em Inglês | MEDLINE | ID: mdl-36344491

RESUMO

Serine/arginine-rich splicing factor 3 (SRSF3) is an RNA binding protein that most often regulates gene expression at the splicing level. Although the role of SRSF3 in mRNA splicing in the nucleus is well known, its splicing-independent role outside of the nucleus is poorly understood. Here, we found that SRSF3 exerts a translational control of p21 mRNA. Depletion of SRSF3 induces cellular senescence and increases the expression of p21 independent of p53. Consistent with the expression patterns of SRSF3 and p21 mRNA in the TCGA database, SRSF3 knockdown increases the p21 mRNA level and its translation efficiency as well. SRSF3 physically associates with the 3'UTR region of p21 mRNA and the translational initiation factor, eIF4A1. Our study proposes a model in which SRSF3 regulates translation by interacting with eIF4A1 at the 3'UTR region of p21 mRNA. We also found that SRSF3 localizes to the cytoplasmic RNA granule along with eIF4A1, which may assist in translational repression therein. Thus, our results provide a new mode of regulation for p21 expression, a crucial regulator of the cell cycle and senescence, which occurs at the translational level and involves SRSF3.


Assuntos
Splicing de RNA , Proteínas de Ligação a RNA , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Regiões 3' não Traduzidas/genética , Fatores de Processamento de RNA/metabolismo , Fatores de Processamento de Serina-Arginina/genética , Fatores de Processamento de Serina-Arginina/metabolismo , Proteínas de Ligação a RNA/metabolismo
10.
Biochem Biophys Res Commun ; 403(1): 79-84, 2010 Dec 03.
Artigo em Inglês | MEDLINE | ID: mdl-21056029

RESUMO

Signaling crosstalk between the ß-catenin and NF-κB pathways represents a functional network. To test whether the crosstalk also occurs on their common target genes, the cyclin D1 promoter was used as a model because it contains binding sites for both proteins. ß-catenin activated transcription from the cyclin D1 promoter, while co-expression of NF-κB p65 reduced ß-catenin-induced transcription. Chromatin immunoprecipitation revealed lithium chloride-induced binding of ß-catenin on one of the T-cell activating factor binding sites. More interestingly, ß-catenin binding was greatly reduced by NF-κB p65, possibly by the protein-protein interaction between the two proteins. Such a dynamic and complex binding of ß-catenin and NF-κB on promoters might contribute to the regulated expression of their target genes.


Assuntos
Ciclina D1/genética , Regulação da Expressão Gênica , Fator de Transcrição RelA/metabolismo , Transcrição Gênica , beta Catenina/metabolismo , Linhagem Celular , Humanos , Imunoprecipitação , Regiões Promotoras Genéticas , Ativação Transcricional
11.
Chembiochem ; 10(8): 1313-6, 2009 May 25.
Artigo em Inglês | MEDLINE | ID: mdl-19405068

RESUMO

Give me some feedback: In vitro selection of aptamers against the H3 peptide provided specific hairpin RNAs that possess high homology with histone H3 mRNA. The identified H3 hairpin RNA binds specifically to the H3 peptide with micromolar affinity and dose-dependently inhibits in vitro translation of the H3 protein. Consequently, the hairpin RNA and H3 peptide are one of the rare cis- and trans-elements on coding regions found among housekeeping proteins in higher eukaryotes.


Assuntos
Histonas/genética , Peptídeos/farmacologia , Biossíntese de Proteínas , RNA Mensageiro/química , Aptâmeros de Nucleotídeos/metabolismo , Sequência de Bases , Retroalimentação Fisiológica , Histonas/metabolismo , Peptídeos/química , RNA Mensageiro/metabolismo
12.
Methods Mol Biol ; 542: 363-77, 2009.
Artigo em Inglês | MEDLINE | ID: mdl-19565913

RESUMO

Aptamers are in vitro evolved molecules that bind to target proteins with high affinity and specificity by adapting three-dimensional structures upon binding. Because cancer cells exhibit the activation of signaling pathways that are not usually activated in normal cells, RNA aptamers against such a cancer cell-specific signal can be useful lead molecules for cancer gene therapy. The Wnt/beta-catenin signaling pathway plays important roles in a critical initiating event in the formation of various human cancers. Because mutations in beta-catenin have been found to be responsible for human tumorigenesis, beta-catenin is the molecular target for effective anticancer therapies. Here, we describe the selection of RNA aptamers against beta-catenin/T-Cell Factor (TCF) proteins and their intracellular expression as intramers. The RNA aptamers acted as central inhibitory players for multiple oncogenic functions of beta-catenin in colon cancer cells. These data provide the proof-of-principle for the use of RNA aptamers for an effective anticancer gene therapy.


Assuntos
Aptâmeros de Nucleotídeos/metabolismo , Biologia Molecular/métodos , Neoplasias/metabolismo , Transdução de Sinais , Animais , Western Blotting , Linhagem Celular Tumoral , Ensaio de Desvio de Mobilidade Eletroforética , Regulação da Expressão Gênica , Biblioteca Gênica , Glutationa Transferase/metabolismo , Humanos , Imunoprecipitação , Camundongos , Proteínas Recombinantes de Fusão/metabolismo , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Técnica de Seleção de Aptâmeros , Transcrição Gênica , Transfecção , Proteínas Wnt/metabolismo , beta Catenina/metabolismo
13.
Nucleic Acids Res ; 35(16): 5511-9, 2007.
Artigo em Inglês | MEDLINE | ID: mdl-17704137

RESUMO

C-Reactive protein (CRP) is a major acute-phase response protein, which is activated by various cytokines. We investigated the mechanism of TNF-alpha-induced CRP expression and found that the p50 subunit of NF-kappaB was responsible for the transcriptional activation of CRP. Since the p50 protein acts as a positive regulator of CRP expression without an inherent transactivation domain, we looked for an interaction partner that could provide p50 with such a domain. We found that beta-catenin enhanced the expression of a CRP mRNA in concert with p50 subunit. Protein-protein interaction between p50 and beta-catenin was important for CRP expression and their interactions to CRP promoter were induced after TNF-a treatment. Since gene expression depends upon the proximity of promoters and distal regulatory sites, we explored the long-range genomic interaction at the CRP locus by chromosome conformation capture (3C). We identified a binding site for beta-catenin in the downstream of CRP gene by 3C and confirmed TNF-alpha-induced association of beta-catenin and p50 by chromatin immunoprecipitation and co-immunoprecipitation assays. Our findings provide evidence that transcription of the CRP gene depends upon p50 and beta-catenin proteins, which is accompanied by close proximity between promoter and the downstream region of CRP gene.


Assuntos
Proteína C-Reativa/genética , Subunidade p50 de NF-kappa B/metabolismo , Elementos Reguladores de Transcrição , Ativação Transcricional , beta Catenina/metabolismo , Sítios de Ligação , Proteína C-Reativa/biossíntese , Linhagem Celular , Imunoprecipitação da Cromatina , Humanos , Regiões Promotoras Genéticas , Fator de Necrose Tumoral alfa/farmacologia
14.
J Mater Sci Mater Med ; 20(12): 2441-53, 2009 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-19593649

RESUMO

The primary goal of this investigation was to develop a calcium phosphate film hybridized with 1alpha,25-dihydroxyvitamin D(3) for the improvement of osteoconductivity of bone substitutes. The hybrid films (hCaP) were prepared at the different concentrations of 1 x 10(-10), 1 x 10(-8), and 1 x 10(-6) M designated as hCaPL, hCaPM, and hCaPH, respectively. The change of the hormone concentration during the preparation of the hybrid films did not cause significant variations on the physical properties of hCaPs, i.e. surface morphology and roughness. On the other hand, X-ray photon spectroscope (XPS) measurements revealed that the concentration change affected the chemical composition of the hybrid films. Recruitment of osteoblast-like MG-63 cells was considerably improved on hCaPs compared to tissue culture plate (TCP). However, cell proliferation on hCaPs was substantially suppressed and inversely proportional to the hormone concentration used. It was observed that bone-like nodules which consisted of bead-like components and well-developed matrix were rapidly formed on hCaPs. Masson's trichrome and safranin-O stainings elucidated that the bead-like components were MG-63 cells. Safranin-O staining showed that proteoglycan was produced actively. These results indicate that the cells cultured on hCaPs were strongly stimulated by the hormone to produce proteoglycan which can be considered as an induction of premature bone formation. The number of the nodules was increased with hormone concentration and most pronounced at the hCaPH. Gene expression patterns of alkaline phosphatase (ALP), transforming growth factor-beta (TGF-beta), and osteopontin (OPN) were strongly modulated by hybridized the hormone. For ALP and OPN, gene expressions were activated earlier on hCaPs than untreated calcium phosphate (CaP) confirming the effect of the hybridization was substantial. The TGF-beta gene expression was immediately activated after seeding but difference between samples was not significant suggesting that the gene expression was modulated not by the hormone hybridization but by CaP itself. As a result, hybridization of 1,25(OH)(2)D(3) with CaP can be a potentially strong candidate to promote osteoconductivity of implant materials.


Assuntos
Calcitriol/química , Fosfatos de Cálcio/química , Sequência de Bases , Adesão Celular , Linhagem Celular Tumoral , Proliferação de Células , Primers do DNA , Regulação da Expressão Gênica , Humanos , Microscopia de Força Atômica , Microscopia Eletrônica de Varredura , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Análise Espectral/métodos
15.
Cancer Res ; 67(19): 9315-21, 2007 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-17909039

RESUMO

Nuclear beta-catenin forms a transcription complex with TCF-4, which is implicated in colon cancer development and progression. Recently, we and others have shown that beta-catenin could be a regulator of RNA splicing and it also stabilizes the cyclooxygenase-2 (COX-2) mRNA. Here, we further explored the role of beta-catenin in the RNA metabolism in colon cancer cells. To specifically modulate the subcellular functions of beta-catenin, we expressed the RNA aptamer in the form of RNA intramers with unique cellular localizations. The nucleus-expressed RNA intramer proved to be effective in reducing the protein-protein interaction between beta-catenin and TCF-4, thus shown to be a specific regulator of beta-catenin-activated transcription. It could also regulate the alternative splicing of E1A minigene in diverse colon cancer cell lines. In addition, we tested whether beta-catenin could stabilize any other mRNAs and found that cyclin D1 mRNA was also bound and stabilized by beta-catenin. Significantly, the cytoplasm-expressed RNA intramer reverted the beta-catenin-induced COX-2 and cyclin D1 mRNA stabilization. We show here that beta-catenin regulated multiple steps of RNA metabolism in colon cancer cells and might be the protein factor coordinating RNA metabolism. We suggest that the RNA intramers could provide useful ways for inhibiting beta-catenin-mediated transcription and RNA metabolism, which might further enhance the antitumorigenic effects of these molecules in colon cancer cells.


Assuntos
Adenocarcinoma/genética , Aptâmeros de Nucleotídeos/metabolismo , Neoplasias do Colo/genética , RNA Neoplásico/metabolismo , beta Catenina/antagonistas & inibidores , Adenocarcinoma/metabolismo , Processamento Alternativo , Animais , Aptâmeros de Nucleotídeos/genética , Neoplasias do Colo/metabolismo , Ciclina D1/biossíntese , Ciclina D1/genética , Ciclo-Oxigenase 2/biossíntese , Ciclo-Oxigenase 2/genética , Células HCT116 , Humanos , Camundongos , Células NIH 3T3 , RNA Mensageiro/biossíntese , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , RNA Neoplásico/genética , Fatores de Transcrição TCF/metabolismo , Proteína 2 Semelhante ao Fator 7 de Transcrição , beta Catenina/genética , beta Catenina/metabolismo
16.
Mol Cells ; 42(1): 8-16, 2019 Jan 31.
Artigo em Inglês | MEDLINE | ID: mdl-30699286

RESUMO

Mutations in the ß-catenin gene (CTNNB1) have been implicated in the pathogenesis of some cancers. The recent development of cancer genome databases has facilitated comprehensive and focused analyses on the mutation status of cancer-related genes. We have used these databases to analyze the CTNNB1 mutations assembled from different tumor types. High incidences of CTNNB1 mutations were detected in endometrial, liver, and colorectal cancers. This finding agrees with the oncogenic role of aberrantly activated ß-catenin in epithelial cells. Elevated frequencies of missense mutations were found in the exon 3 of CTNNB1, which is responsible for encoding the regulatory amino acids at the N-terminal region of the protein. In the case of metastatic colorectal cancers, inframe deletions were revealed in the region spanning exon 3. Thus, exon 3 of CTNNB1 can be considered to be a mutation hotspot in these cancers. Since the N-terminal region of the ß-catenin protein forms a flexible structure, many questions arise regarding the structural and functional impacts of hotspot mutations. Clinical identification of hotspot mutations could provide the mechanistic basis for an oncogenic role of mutant ß-catenin proteins in cancer cells. Furthermore, a systematic understanding of tumor-driving hotspot mutations could open new avenues for precision oncology.


Assuntos
Bases de Dados Genéticas , Genoma Humano , Mutação/genética , Neoplasias/genética , beta Catenina/genética , Éxons/genética , Humanos
17.
Mol Cells ; 42(7): 523-529, 2019 Jul 31.
Artigo em Inglês | MEDLINE | ID: mdl-31234619

RESUMO

mRNA quality is controlled by multiple RNA surveillance machineries to reduce errors during gene expression processes in eukaryotic cells. Nonsense-mediated mRNA decay (NMD) is a well-characterized mechanism that degrades error-containing transcripts during translation. The ATP-dependent RNA helicase up-frameshift 1 (UPF1) is a key player in NMD that is mostly prevalent in the cytoplasm. However, recent studies on UPF1-RNA interaction suggest more comprehensive roles of UPF1 on diverse forms of target transcripts. Here we used subcellular fractionation and immunofluorescence to understand such complex functions of UPF1. We demonstrated that UPF1 can be localized to the nucleus and predominantly associated with the chromatin. Moreover, we showed that UPF1 associates more strongly with the chromatin when the transcription elongation and translation inhibitors were used. These findings suggest a novel role of UPF1 in transcription elongation-coupled RNA machinery in the chromatin, as well as in translation-coupled NMD in the cytoplasm. Thus, we propose that cytoplasmic UPF1-centric RNA surveillance mechanism could be extended further up to the chromatin-associated UPF1 and cotranscriptional RNA surveillance. Our findings could provide the mechanistic insights on extensive regulatory roles of UPF1 for many cellular RNAs.


Assuntos
Cromatina/metabolismo , RNA Helicases/metabolismo , RNA/genética , Transativadores/metabolismo , Transcrição Gênica , Células HeLa , Humanos , Modelos Biológicos
18.
Front Biosci ; 13: 2653-9, 2008 Jan 01.
Artigo em Inglês | MEDLINE | ID: mdl-17981740

RESUMO

Gene therapy has offered highly possible promises for treatment of cancers, as many potential therapeutic genes involved in regulation of molecular processes may be introduced by gene transfer, which can arrest angiogenesis, tumor growth, invasion, metastasis, and/or can stimulate the immune response against tumors. Therefore, viral and non-viral gene delivery systems have been developed to establish an ideal delivery vector for cancer gene therapy over the past several years. Among the currently developed virus vectors, the adeno-associated virus (AAV) vector is considered as one of those that are closest to the ideal vector mainly for genetic diseases due to the following prominent features; the lack of pathogenicity and toxicity, ability to infect dividing and non-dividing cells of various tissue origins, a very low host immune response and long-term expression. Particularly, the most important attribute of AAV vectors is their safety profile in clinical trials ranging from CF to Parkinson's disease. Although adenovirus and several other oncolytic viruses have been more frequently used to develop cancer gene therapy, AAV also has many critical properties to be exploited for a cancer gene delivery vector. In this review, we will briefly summarize the basic biology of AAV and then mainly focus on recent progresses on AAV vector development and AAV-mediated therapeutic vectors for cancer gene therapy.


Assuntos
Dependovirus/genética , Técnicas de Transferência de Genes , Terapia Genética/métodos , Vetores Genéticos , Neoplasias/genética , Neoplasias/terapia , Inibidores da Angiogênese/farmacologia , Animais , Capsídeo/metabolismo , Ensaios Clínicos como Assunto , Humanos , Imunoterapia/métodos
19.
Nucleic Acids Res ; 34(19): 5705-14, 2006.
Artigo em Inglês | MEDLINE | ID: mdl-17040897

RESUMO

Cyclooxygenase-2 (COX-2) mRNA is induced in the majority of human colorectal carcinomas. Transcriptional regulation plays a key role in COX-2 expression in human colon carcinoma cells, but post-transcriptional regulation of its mRNA is also critical for tumorigenesis. Expression of COX-2 mRNA is regulated by various cytokines, growth factors and other signals. beta-Catenin, a key transcription factor in the Wnt signal pathway, activates transcription of COX-2. Here we found that COX-2 mRNA was also substantially stabilized by activating beta-catenin in NIH3T3 and 293T cells. We identified the beta-catenin-responsive element in the proximal region of the COX-2 3'-untranslated region (3'-UTR) and showed that beta-catenin interacted with AU-rich elements (ARE) of 3'-UTR in vitro and in vivo. Interestingly, beta-catenin induced the cytoplasmic localization of the RNA stabilizing factor, HuR, which may bind to beta-catenin in an RNA-mediated complex and facilitate beta-catenin-dependent stabilization of COX-2 mRNA. Taken together, we provided evidences for beta-catenin as an RNA-binding factor and a regulator of stabilization of COX-2 mRNA.


Assuntos
Regiões 3' não Traduzidas/química , Ciclo-Oxigenase 2/genética , Estabilidade de RNA , RNA Mensageiro/metabolismo , beta Catenina/metabolismo , Regiões 3' não Traduzidas/metabolismo , Adenina/análise , Animais , Antígenos de Superfície/metabolismo , Sequência de Bases , Sítios de Ligação , Linhagem Celular , Ciclo-Oxigenase 2/metabolismo , Proteínas ELAV , Proteína Semelhante a ELAV 1 , Regulação Enzimológica da Expressão Gênica , Humanos , Camundongos , Proteínas de Ligação a RNA/metabolismo , Sequências Reguladoras de Ácido Ribonucleico , Uracila/análise
20.
Cancer Res ; 66(21): 10560-6, 2006 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-17079480

RESUMO

Activated beta-catenin regulates the transcription of oncogenic target genes and is critical for tumorigenesis. Because nuclear functions are frequently coupled, we investigated whether it also has a role in alternative splicing of oncogenic genes. We showed that stabilized beta-catenin caused alternative splicing of estrogen receptor-beta pre-mRNA in colon cancer cells. To establish a direct role of beta-catenin in regulated splicing, we selected a high-affinity RNA aptamer that associated with beta-catenin in vivo. Nuclear localized aptamer inhibited beta-catenin-dependent transcription of cyclin D1 and c-myc in colon cancer cells; thus, cells stably expressing the aptamer exhibited cell cycle arrest and reduced tumor forming potential. Most significantly, the aptamer prevented the alternative splicing induced by stabilized beta-catenin. Taken together, our results establish that beta-catenin has an important role in both transcription and splicing, and that its action can be modulated by a high-affinity RNA aptamer. The RNA aptamer could be further developed as a specific inhibitor for cancer therapeutics.


Assuntos
Processamento Alternativo , Aptâmeros de Nucleotídeos/farmacologia , Neoplasias do Colo/genética , Transcrição Gênica , beta Catenina/fisiologia , Transporte Ativo do Núcleo Celular , Neoplasias do Colo/metabolismo , Neoplasias do Colo/terapia , Receptor beta de Estrogênio/genética , Células HCT116 , Humanos , RNA Mensageiro/metabolismo , beta Catenina/antagonistas & inibidores
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