Uncovering chains of infections through spatio-temporal and visual analysis of COVID-19 contact traces.

A major challenge for departments of public health (DPHs) in dealing with the ongoing COVID-19 pandemic is tracing contacts in exponentially growing SARS-CoV-2 infection clusters. Prevention of further disease spread requires a comprehensive registration of the connections between individuals and clusters. Due to the high number of infections with unknown origin, the healthcare analysts need to identify connected cases and clusters through accumulated epidemiological knowledge and the metadata of the infections in their database. Here we contribute a visual analytics dashboard to identify, assess and visualize clusters in COVID-19 contact tracing networks. Additionally, we demonstrate how graph-based machine learning methods can be used to find missing links between infection clusters and thus support the mission to get a comprehensive view on infection events. This work was developed through close collaboration with DPHs in Germany. We argue how our dashboard supports the identification of clusters by public health experts, discuss ongoing developments and possible extensions.

Visual Exploration and Analysis of Simulation and Testing Data in Motor Engineering.

End-of-line tests and defect detection are vital for ensuring the reliability of electric motors. However, automated defect detection methods, e.g., data-driven approaches, face challenges due to the limited availability of real data from failed motors. Simulated data, though beneficial, lacks the complexity of real motors, impacting the performance of these methods when applied to actual observations. To tackle this challenge, we introduce a visual analysis tool designed to facilitate the analysis of measured and simulated data, presented in the form of time series data. This tool helps identify domain-invariant features and evaluate simulation data accuracy, assisting in selecting training data for reliable automated defect detection in real-world scenarios. The main contribution of this work is a design proposal based on visual design principles, specifically tailored to address the unique requirements of electric motor professionals. The visual design is validated by findings from a think-aloud study with specialized engineers.

COMPO*SED: Composite Parallel Coordinates for Co-Dependent Multi-Attribute Choices.

We propose Composite Parallel Coordinates, a novel parallel coordinates technique to effectively represent the interplay of component alternatives in a system. It builds upon a dedicated data model that formally describes the interaction of components. Parallel coordinates can help decision-makers identify the most preferred solution among a number of alternatives. Multi-component systems require one such multi-attribute choice for each component. Each of these choices might have side effects on the system's operability and performance, making them co-dependent. Common approaches employ complex multi-component models or involve back-and-forth iterations between single components until an acceptable compromise is reached. A simultaneous visual exploration across independently modeled but connected components is needed to make system design more efficient. Using dedicated layout and interaction strategies, our Composite Parallel Coordinates allow analysts to explore both individual properties of components as well as their interoperability and joint performance. We showcase the effectiveness of Composite Parallel Coordinates for co-dependent multi-attribute choices by means of three real-world scenarios from distinct application areas. In addition to the case studies, we reflect on observing two domain experts collaboratively working with the proposed technique and communicating along the way.

Combining seeded region growing and k-nearest neighbours for the segmentation of routinely acquired spatio-temporal image data.

PURPOSE: The acquisition conditions of medical imaging are often precisely defined, leading to a high homogeneity among different data sets. Nonetheless, outliers or artefacts still appear and need to be reliably detected to ensure a reliable diagnosis. Thus, the algorithms need to handle small sample sizes especially, when working with domain specific imaging modalities. METHODS: In this work, we suggest a pipeline for the detection and segmentation of light pollution in near-infrared fluorescence optical imaging (NIR-FOI), based on a small sample size. NIR-FOI produces spatio-temporal data with two spatial and one temporal dimension. To calculate a two-dimensional light pollution map for the entire image stack, we combine region growing and k-nearest neighbours (kNN), which classifies pixels into fore- and background by its entire temporal component. Thus, decision-making on reduced data is omitted. RESULTS: We achieved a [Formula: see text] score of 0.99 for classifying a data set as light polluted or pollution-free. Additionally, we reached a total [Formula: see text] score of 0.90 for detecting regions of interest within the polluted data sets. Finally, an average Dice's coefficient measuring the segmentation performance over all polluted data sets of 0.80 was accomplished. CONCLUSIONS: A Dice's coefficient of 0.80 for the area segmentation does not seem perfect. However, there are two main factors, besides true prediction errors, lowering the score: Segmentation mistakes on small areas lead to a rapid decrease in the score and labelling errors due to complex data. However, in combination with the light-polluted data set and pollution area detection, these results can be considered successful and play a key role in our general goal: Exploiting NIR-FOI for the early detection of arthritis within hand joints.

A Survey on Progressive Visualization.

Currently, growing data sources and long-running algorithms impede user attention and interaction with visual analytics applications. Progressive visualization (PV) and visual analytics (PVA) alleviate this problem by allowing immediate feedback and interaction with large datasets and complex computations, avoiding waiting for complete results by using partial results improving with time. Yet, creating a progressive visualization requires more effort than a regular visualization but also opens up new possibilities, such as steering the computations towards more relevant parts of the data, thus saving computational resources. However, there is currently no comprehensive overview of the design space for progressive visualization systems. We surveyed the related work of PV and derived a new taxonomy for progressive visualizations by systematically categorizing all PV publications that included visualizations with progressive features. Progressive visualizations can be categorized by well-known visualization taxonomies, but we also found that progressive visualizations can be distinguished by the way they manage their data processing, data domain, and visual update. Furthermore, we identified key properties such as uncertainty, steering, visual stability, and real-time processing that are significantly different with progressive applications. We also collected evaluation methodologies reported by the publications and conclude with statistical findings, research gaps, and open challenges. A continuously updated visual browser of the survey data is available at visualsurvey.net/pva.

The Effect of Alignment on People's Ability to Judge Event Sequence Similarity.

Event sequences are central to the analysis of data in domains that range from biology and health, to logfile analysis and people's everyday behavior. Many visualization tools have been created for such data, but people are error-prone when asked to judge the similarity of event sequences with basic presentation methods. This article describes an experiment that investigates whether local and global alignment techniques improve people's performance when judging sequence similarity. Participants were divided into three groups (basic versus local versus global alignment), and each participant judged the similarity of 180 sets of pseudo-randomly generated sequences. Each set comprised a target, a correct choice and a wrong choice. After training, the global alignment group was more accurate than the local alignment group (98 versus 93 percent correct), with the basic group getting 95 percent correct. Participants' response times were primarily affected by the number of event types, the similarity of sequences (measured by the Levenshtein distance) and the edit types (nine combinations of deletion, insertion and substitution). In summary, global alignment is superior and people's performance could be further improved by choosing alignment parameters that explicitly penalize sequence mismatches.

A Visualization Interface to Improve the Transparency of Collected Personal Data on the Internet.

Online services are used for all kinds of activities, like news, entertainment, publishing content or connecting with others. But information technology enables new threats to privacy by means of global mass surveillance, vast databases and fast distribution networks. Current news are full of misuses and data leakages. In most cases, users are powerless in such situations and develop an attitude of neglect for their online behaviour. On the other hand, the GDPR (General Data Protection Regulation) gives users the right to request a copy of all their personal data stored by a particular service, but the received data is hard to understand or analyze by the common internet user. This paper presents TransparencyVis - a web-based interface to support the visual and interactive exploration of data exports from different online services. With this approach, we aim at increasing the awareness of personal data stored by such online services and the effects of online behaviour. This design study provides an online accessible prototype and a best practice to unify data exports from different sources.

The Role of Interactive Visualization in Fostering Trust in AI.

The increasing use of artificial intelligence (AI) technologies across application domains has prompted our society to pay closer attention to AI's trustworthiness, fairness, interpretability, and accountability. In order to foster trust in AI, it is important to consider the potential of interactive visualization, and how such visualizations help build trust in AI systems. This manifesto discusses the relevance of interactive visualizations and makes the following four claims: i) trust is not a technical problem, ii) trust is dynamic, iii) visualization cannot address all aspects of trust, and iv) visualization is crucial for human agency in AI.

Using Dashboard Networks to Visualize Multiple Patient Histories: A Design Study on Post-Operative Prostate Cancer.

In this design study, we present a visualization technique that segments patients' histories instead of treating them as raw event sequences, aggregates the segments using criteria such as the whole history or treatment combinations, and then visualizes the aggregated segments as static dashboards that are arranged in a dashboard network to show longitudinal changes. The static dashboards were developed in nine iterations, to show 15 important attributes from the patients' histories. The final design was evaluated with five non-experts, five visualization experts and four medical experts, who successfully used it to gain an overview of a 2,000 patient dataset, and to make observations about longitudinal changes and differences between two cohorts. The research represents a step-change in the detail of large-scale data that may be successfully visualized using dashboards, and provides guidance about how the approach may be generalized.

MotionExplorer: exploratory search in human motion capture data based on hierarchical aggregation.

We present MotionExplorer, an exploratory search and analysis system for sequences of human motion in large motion capture data collections. This special type of multivariate time series data is relevant in many research fields including medicine, sports and animation. Key tasks in working with motion data include analysis of motion states and transitions, and synthesis of motion vectors by interpolation and combination. In the practice of research and application of human motion data, challenges exist in providing visual summaries and drill-down functionality for handling large motion data collections. We find that this domain can benefit from appropriate visual retrieval and analysis support to handle these tasks in presence of large motion data. To address this need, we developed MotionExplorer together with domain experts as an exploratory search system based on interactive aggregation and visualization of motion states as a basis for data navigation, exploration, and search. Based on an overview-first type visualization, users are able to search for interesting sub-sequences of motion based on a query-by-example metaphor, and explore search results by details on demand. We developed MotionExplorer in close collaboration with the targeted users who are researchers working on human motion synthesis and analysis, including a summative field study. Additionally, we conducted a laboratory design study to substantially improve MotionExplorer towards an intuitive, usable and robust design. MotionExplorer enables the search in human motion capture data with only a few mouse clicks. The researchers unanimously confirm that the system can efficiently support their work.

How visualization courses have changed over the past 10 years.

The past 10 years have seen profound changes in visualization algorithms, techniques, methodologies, and applications. These changes are forcing alterations to visualization courses. Unfortunately, outdated course content recommendations, together with profound changes in the underlying technology and methodology, are producing an unstable ground for educators at a time when visual representations are becoming increasingly important. To address this issue, educators held meetings or workshops at Siggraph 2011 and 2012 and a panel and workshop at Eurographics 2012. This article presents the insights gathered at these events.

Toward visualization in policy modeling.

This article looks at the current and future roles of information visualization, semantics visualization, and visual analytics in policy modeling. Many experts believe that you can't overestimate visualization's role in this respect.