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1.
Phys Rev Lett ; 131(17): 178302, 2023 Oct 27.
Artigo em Inglês | MEDLINE | ID: mdl-37955492

RESUMO

We numerically study the shear rheology of a binary mixture of soft active Brownian particles, from the fluid to the disordered solid regime. At low shear rates, we find a Newtonian regime, where a Green-Kubo relation with an effective temperature provides the linear viscosity. It is followed by a shear-thinning regime at high shear rates. At high densities, solidification is signaled by the emergence of a finite yield stress. We construct a "fluid-glass-jamming" phase diagram with activity replacing temperature. While both parameters gauge fluctuations, activity also changes the exponent characterizing the decay of the diffusivity close to the glass transition and the shape of the yield stress surface. The dense disordered active solid appears to be mostly dominated by athermal jamming rather than glass rheology.

2.
Phys Rev Lett ; 131(25): 258302, 2023 Dec 22.
Artigo em Inglês | MEDLINE | ID: mdl-38181332

RESUMO

We study fluctuating field models with spontaneously emerging dynamical phases. We consider two typical transition scenarios associated with parity-time symmetry breaking: oscillatory instabilities and critical exceptional points. An analytical investigation of the low-noise regime reveals a drastic increase of the mesoscopic entropy production toward the transitions. For an illustrative model of two nonreciprocally coupled Cahn-Hilliard fields, we find physical interpretations in terms of actively propelled interfaces and a coupling of eigenmodes of the linearized dynamics near the critical exceptional point.

3.
Phys Rev Lett ; 130(5): 058204, 2023 Feb 03.
Artigo em Inglês | MEDLINE | ID: mdl-36800459

RESUMO

Predicting transport rates of windblown sand is a central problem in aeolian research, with implications for climate, environmental, and planetary sciences. Though studied since the 1930s, the underlying many-body dynamics is still incompletely understood, as underscored by the recent empirical discovery of an unexpected third-root scaling in the particle-fluid density ratio. Here, by means of grain-scale simulations and analytical modeling, we elucidate how a complex coupling between grain-bed collisions and granular creep within the sand bed yields a dilatancy-enhanced bed erodibility. Our minimal saltation model robustly predicts both the observed scaling and a new undersaturated steady transport state that we confirm by simulations for rarefied atmospheres.

4.
Phys Rev Lett ; 127(25): 258001, 2021 Dec 17.
Artigo em Inglês | MEDLINE | ID: mdl-35029446

RESUMO

Living many-body systems often exhibit scale-free collective behavior reminiscent of thermal critical phenomena. But their mutual interactions are inevitably retarded due to information processing and delayed actuation. We numerically investigate the consequences for the finite-size scaling in the Vicsek model of motile active matter. A growing delay time initially facilitates but ultimately impedes collective ordering and turns the dynamical scaling from diffusive to ballistic. It provides an alternative explanation of swarm traits previously attributed to inertia.

5.
Phys Rev Lett ; 126(22): 228001, 2021 Jun 04.
Artigo em Inglês | MEDLINE | ID: mdl-34152174

RESUMO

Active-particle suspensions exhibit distinct polarization-density patterns in activity landscapes, even without anisotropic particle interactions. Such polarization without alignment forces is at work in motility-induced phase separation and betrays intrinsic microscopic activity to mesoscale observers. Using stable long-term confinement of a single thermophoretic microswimmer in a dedicated force-free particle trap, we examine the polarized interfacial layer at a motility step and confirm that it does not exert pressure onto the bulk. Our observations are quantitatively explained by an analytical theory that can also guide the analysis of more complex geometries and many-body effects.


Assuntos
Modelos Teóricos , Difusão , Modelos Biológicos , Movimento , Termodinâmica
6.
Eur Phys J E Soft Matter ; 44(7): 90, 2021 Jul 03.
Artigo em Inglês | MEDLINE | ID: mdl-34218345

RESUMO

The interactions of autonomous microswimmers play an important role for the formation of collective states of motile active matter. We study them in detail for the common microswimmer-design of two-faced Janus spheres with hemispheres made from different materials. Their chemical and physical surface properties may be tailored to fine-tune their mutual attractive, repulsive or aligning behavior. To investigate these effects systematically, we monitor the dynamics of a single gold-capped Janus particle in the external temperature field created by an optically heated metal nanoparticle. We quantify the orientation-dependent repulsion and alignment of the Janus particle and explain it in terms of a simple theoretical model for the induced thermoosmotic surface fluxes. The model reveals that the particle's angular velocity is solely determined by the temperature profile on the equator between the Janus particle's hemispheres and their phoretic mobility contrast. The distortion of the external temperature field by their heterogeneous heat conductivity is moreover shown to break the apparent symmetry of the problem.

7.
J Chem Phys ; 152(6): 064104, 2020 Feb 14.
Artigo em Inglês | MEDLINE | ID: mdl-32061238

RESUMO

Single-molecule force spectroscopy data are conventionally analyzed using a schematic model, wherein a molecular bond is represented as a virtual particle diffusing in a one-dimensional free-energy landscape. However, this simple and efficient approach is unable to account for the "anomalous" bond-breaking kinetics increasingly observed in force spectroscopy experiments and simulations, e.g., in the form of non-exponential distributions of bond lifetimes under constant load. Here, we show that such characteristic traits arise naturally in a rigorous extension of the one-dimensional theory that accounts for the transient dynamics of a generic set of coupled degrees of freedom. These "hidden modes" affect the reaction dynamics in various ways, depending on their relaxation spectrum and the loading protocol, giving rise, in particular, to apparent static and dynamic disorder. In two complementary asymptotic limits, we are able to find exact analytical expressions for pertinent experimental observables, such as the mean rupture force and the rupture-force distribution. Intriguingly, our asymptotic results become unconditionally exact at high loading rates, thus providing us with a microscopically consistent theory of rapid force spectroscopy that avoids the usual Markov assumption.

8.
Biochim Biophys Acta ; 1853(11 Pt B): 3025-37, 2015 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-26151340

RESUMO

Many soft materials are classified as viscoelastic. They behave mechanically neither quite fluid-like nor quite solid-like - rather a bit of both. Biomaterials are often said to fall into this class. Here, we argue that this misses a crucial aspect, and that biomechanics is essentially damage mechanics, at heart. When deforming an animal cell or tissue, one can hardly avoid inducing the unfolding of protein domains, the unbinding of cytoskeletal crosslinkers, the breaking of weak sacrificial bonds, and the disruption of transient adhesions. We classify these activated structural changes as inelastic. They are often to a large degree reversible and are therefore not plastic in the proper sense, but they dissipate substantial amounts of elastic energy by structural damping. We review recent experiments involving biological materials on all scales, from single biopolymers over cells to model tissues, to illustrate the unifying power of this paradigm. A deliberately minimalistic yet phenomenologically very rich mathematical modeling framework for inelastic biomechanics is proposed. It transcends the conventional viscoelastic paradigm and suggests itself as a promising candidate for a unified description and interpretation of a wide range of experimental data. This article is part of a Special Issue entitled: Mechanobiology.


Assuntos
Membrana Celular/química , Citoesqueleto/química , Proteínas de Membrana/química , Modelos Químicos , Animais , Membrana Celular/metabolismo , Citoesqueleto/metabolismo , Humanos , Proteínas de Membrana/metabolismo , Estrutura Terciária de Proteína
9.
Phys Rev E ; 110(1-2): 019902, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-39161038

RESUMO

This corrects the article DOI: 10.1103/PhysRevE.106.014609.

10.
Biomater Adv ; 163: 213961, 2024 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-39032434

RESUMO

The mechanical characteristics of the extracellular environment are known to significantly influence cancer cell behavior in vivo and in vitro. The structural complexity and viscoelastic dynamics of the extracellular matrix (ECM) pose significant challenges in understanding its impact on cancer cells. Herein, we report distinct regulatory signatures in the invasion of different breast cancer cell lines into three-dimensional (3D) fibrillar collagen networks, caused by systematic modifications of the physical network properties. By reconstituting collagen networks of thin fibrils, we demonstrate that such networks can display network strand flexibility akin to that of synthetic polymer networks, known to exhibit entropic rubber elasticity. This finding contrasts with the predominant description of the mechanics of fibrillar collagen networks by an enthalpic bending elasticity of rod-like fibrils. Mean-squared displacement analysis of free-standing fibrils confirmed a flexible fiber regime in networks of thin fibrils. Furthermore, collagen fibrils in both networks were softened by the adsorption of highly negatively charged sulfonated polymers and colloidal probe force measurements of network elastic modulus again proofed the occurrence of the two different physical network regimes. Our cell assays revealed that the cellular behavior (morphology, clustering, invasiveness, matrix metalloproteinase (MMP) activity) of the 'weakly invasive' MCF-7 and 'highly invasive' MDA-MB-231 breast cancer cell lines is distinctively affected by the physical (enthalpic/entropic) network regime, and cannot be explained by changes of the network elastic modulus, alone. These results highlight an essential pathway, albeit frequently overlooked, how the physical characteristics of fibrillar ECMs affect cellular behavior. Considering the coexistence of diverse physical network regimes of the ECM in vivo, our findings underscore their critical role of ECM's physical network regimes in tumor progression and other cell functions, and moreover emphasize the significance of 3D in vitro collagen network models for quantifying cell responses in both healthy and pathological states.


Assuntos
Neoplasias da Mama , Matriz Extracelular , Humanos , Neoplasias da Mama/patologia , Neoplasias da Mama/metabolismo , Feminino , Matriz Extracelular/metabolismo , Linhagem Celular Tumoral , Invasividade Neoplásica , Colágenos Fibrilares/metabolismo , Fenótipo , Colágeno/metabolismo , Colágeno/química , Movimento Celular
11.
Phys Rev E ; 107(4-1): 044106, 2023 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-37198792

RESUMO

Graham has shown [Z. Phys. B 26, 397 (1977)0340-224X10.1007/BF01570750] that a fluctuation-dissipation relation can be imposed on a class of nonequilibrium Markovian Langevin equations that admit a stationary solution of the corresponding Fokker-Planck equation. The resulting equilibrium form of the Langevin equation is associated with a nonequilibrium Hamiltonian. Here we provide some explicit insight into how this Hamiltonian may lose its time-reversal invariance and how the "reactive" and "dissipative" fluxes loose their distinct time-reversal symmetries. The antisymmetric coupling matrix between forces and fluxes no longer originates from Poisson brackets and the "reactive" fluxes contribute to the ("housekeeping") entropy production, in the steady state. The time-reversal even and odd parts of the nonequilibrium Hamiltonian contribute in qualitatively different but physically instructive ways to the entropy. We find instances where fluctuations due to noise are solely responsible for the dissipation. Finally, this structure gives rise to a new, physically pertinent instance of frenesy.

12.
Phys Rev E ; 108(6-1): 064610, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-38243463

RESUMO

We study the nonreciprocal Cahn-Hilliard model with thermal noise as a prototypical example of a generic class of non-Hermitian stochastic field theories, analyzed in two companion papers [Suchanek, Kroy, and Loos, Phys. Rev. Lett. 131, 258302 (2023)10.1103/PhysRevLett.131.258302; Phys. Rev. E 108, 064123 (2023)10.1103/PhysRevE.108.064123]. Due to the nonreciprocal coupling between two field components, the model is inherently out of equilibrium and can be regarded as an active field theory. Beyond the conventional homogeneous and static-demixed phases, it exhibits a traveling-wave phase, which can be entered via either an oscillatory instability or a critical exceptional point. By means of a Fourier decomposition of the entropy production rate, we quantify the associated scale-resolved time-reversal symmetry breaking, in all phases and across the transitions, in the low-noise regime. Our perturbative calculation reveals its dependence on the strength of the nonreciprocal coupling. Surging entropy production near the static-dynamic transitions can be attributed to entropy-generating fluctuations in the longest wavelength Fourier mode and heralds the emerging traveling wave. Its translational dynamics can be mapped on the dissipative ballistic motion of an active (quasi)particle.

13.
Phys Rev E ; 108(6-1): 064123, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-38243548

RESUMO

We study time-reversal symmetry breaking in non-Hermitian fluctuating field theories with conserved dynamics, comprising the mesoscopic descriptions of a wide range of nonequilibrium phenomena. They exhibit continuous parity-time (PT) symmetry-breaking phase transitions to dynamical phases. For two concrete transition scenarios, exclusive to non-Hermitian dynamics, namely, oscillatory instabilities and critical exceptional points, a low-noise expansion exposes a pretransitional surge of the mesoscale (informatic) entropy production rate, inside the static phases. Its scaling in the susceptibility contrasts conventional critical points (such as second-order phase transitions), where the susceptibility also diverges, but the entropy production generally remains finite. The difference can be attributed to active fluctuations in the wavelengths that become unstable. For critical exceptional points, we identify the coupling of eigenmodes as the entropy-generating mechanism, causing a drastic noise amplification in the Goldstone mode.

14.
Nat Commun ; 14(1): 56, 2023 01 04.
Artigo em Inglês | MEDLINE | ID: mdl-36599830

RESUMO

Collective states of inanimate particles self-assemble through physical interactions and thermal motion. Despite some phenomenological resemblance, including signatures of criticality, the autonomous dynamics that binds motile agents into flocks, herds, or swarms allows for much richer behavior. Low-dimensional models have hinted at the crucial role played in this respect by perceived information, decision-making, and feedback, implying that the corresponding interactions are inevitably retarded. Here we present experiments on spherical Brownian microswimmers with delayed self-propulsion toward a spatially fixed target. We observe a spontaneous symmetry breaking to a transiently chiral dynamical state and concomitant critical behavior that do not rely on many-particle cooperativity. By comparison with the stochastic delay differential equation of motion of a single swimmer, we pinpoint the delay-induced effective synchronization of the swimmers with their own past as the key mechanism. Increasing numbers of swimmers self-organize into layers with pro- and retrograde orbital motion, synchronized and stabilized by steric, phoretic, and hydrodynamic interactions. Our results demonstrate how even most simple retarded interactions can foster emergent complex adaptive behavior in small active-particle ensembles.


Assuntos
Hidrodinâmica , Movimento (Física)
15.
Phys Rev E ; 106(1-1): 014609, 2022 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-35974505

RESUMO

Physical interactions generally respect certain symmetries, such as reciprocity and energy conservation, which survive in coarse-grained isothermal descriptions. Active many-body systems usually break such symmetries intrinsically, on the particle level, so that their collective behavior is often more naturally interpreted as a result of information exchange. Here we study numerically how information spreads from a "leader" particle through an initially aligned flock, described by the Vicsek model without noise. In the low-speed limit of a static spin lattice, we find purely conductive spreading, reminiscent of heat transfer. Swarm motility and heterogeneity can break reciprocity and spin conservation. But what seems more consequential for the swarm response is that the dispersion relation acquires a significant convective contribution along the leader's direction of motion.

16.
Phys Rev E ; 106(5-1): 054612, 2022 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-36559364

RESUMO

Retardation between sensation and action is an inherent biological trait. Here we study its effect in the Vicsek model, which is a paradigmatic swarm model. We find that (1) a discrete time delay in the orientational interactions diminishes the ability of strongly aligned swarms to follow a leader and, in return, increases their stability against random orientation fluctuations; (2) both longer delays and higher speeds favor ballistic over diffusive spreading of information (orientation) through the swarm; (3) for short delays, the mean change in the total orientation (the order parameter) scales linearly in a small orientational bias of the leaders and inversely in the delay time, while its variance first increases and then saturates with increasing delays; and (4) the linear response breaks down when orientation conservation is broken.

17.
Nat Commun ; 13(1): 162, 2022 01 10.
Artigo em Inglês | MEDLINE | ID: mdl-35013166

RESUMO

Aeolian sand transport is a major process shaping landscapes on Earth and on diverse celestial bodies. Conditions favoring bimodal sand transport, with fine-grain saltation driving coarse-grain reptation, give rise to the evolution of megaripples with a characteristic bimodal sand composition. Here, we derive a unified phase diagram for this special aeolian process and the ensuing nonequilibrium megaripple morphodynamics by means of a conceptually simple quantitative model, grounded in the grain-scale physics. We establish a well-preserved quantitative signature of bimodal aeolian transport in the otherwise highly variable grain size distributions, namely, the log-scale width (Krumbein phi scale) of their coarse-grain peaks. A comprehensive collection of terrestrial and extraterrestrial data, covering a wide range of geographical sources and environmental conditions, supports the accuracy and robustness of this unexpected theoretical finding. It could help to resolve ambiguities in the classification of terrestrial and extraterrestrial sedimentary bedforms.

18.
Chem Sci ; 13(19): 5734-5740, 2022 May 18.
Artigo em Inglês | MEDLINE | ID: mdl-35694336

RESUMO

A wealth of chemical bonds and polymers have been studied with single-molecule force spectroscopy, usually by applying a force perpendicular to the anchoring surface. However, the direction-dependence of the bond strength lacks fundamental understanding. Here we establish stereographic force spectroscopy to study the single-bond strength for various pulling angles. Surprisingly, we find that the apparent bond strength increases with increasing pulling angle relative to the anchoring surface normal, indicating a sturdy mechanical anisotropy of a chemical bond. This finding can be rationalized by a fixed pathway for the rupture of the bond, resulting in an effective projection of the applied pulling force onto a nearly fixed rupture direction. Our study is fundamental for the molecular understanding of the role of the direction of force application in molecular adhesion and friction. It is also a prerequisite for the nanoscale tailoring of the anisotropic strength of bottom-up designed materials.

19.
Biophys J ; 111(5): 898-9, 2016 09 06.
Artigo em Inglês | MEDLINE | ID: mdl-27602716
20.
Phys Rev E ; 103(6-1): 062601, 2021 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-34271745

RESUMO

The colocalization of density modulations and particle polarization is a characteristic emergent feature of motile active matter in activity gradients. We employ the active-Brownian-particle model to derive precise analytical expressions for the density and polarization profiles of a single Janus-type swimmer in the vicinity of an abrupt activity step. Our analysis allows for an optional (but not necessary) orientation-dependent propulsion speed, as often employed in force-free particle steering. The results agree well with measurement data for a thermophoretic microswimmer presented in the companion paper [Söker et al., Phys. Rev. Lett. 126, 228001 (2021)10.1103/PhysRevLett.126.228001], and they can serve as a template for more complex applications, e.g., to motility-induced phase separation or studies of physical boundaries. The essential physics behind our formal results is robustly captured and elucidated by a schematic two-species "run-and-tumble" model.

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