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1.
Phys Chem Chem Phys ; 25(13): 9364-9372, 2023 Mar 29.
Artigo em Inglês | MEDLINE | ID: mdl-36920848

RESUMO

The currently unknown phosphorus allotrope P8 is of interest since its 40 total valence electrons is a "magic number" corresponding to a filled 1S21P61D101S21F142P6 shell such as found in the relatively stable main group element clusters Al13- and Ge94-. However, P8 still remains as an elusive structure not realized experimentally. The lowest energy P8 structure by a margin of ∼9 kcal mol-1 is shown by density functional theory to be a cuneane analogue with no PP double bonds and two each of P5, P4, and P3 rings. Higher energy P8 structures are polycyclic systems having at most a single PP double bond. These P8 systems are not "carbon copies" of the corresponding (CH)8 hydrocarbons with exactly one hydrogen atom bonded to each carbon atom. Thus the lowest energy (CH)8 structure is cyclooctatetraene with four CC bonds followed by benzocyclobutene with three CC bonds. The cuneane (CH)8 structure is a relatively high energy isomer lying ∼36 kcal mol-1 above cyclooctatetraene. The cubane P8 and (CH)8 structures are even higher energy structures, lying ∼37 and ∼74 kcal mol-1 in energy above the corresponding global minima. Our results demonstrate differences in medium sized aggregates of elemental phosphorus and isolobal hydrocarbon species.

2.
J Phys Chem A ; 127(28): 5887-5898, 2023 Jul 20.
Artigo em Inglês | MEDLINE | ID: mdl-37433263

RESUMO

The structures and energetics of the neutral Bn-1Hn-1Fe(CO)x (x = 4, 3) and the dianions [Bn-1Hn-1Fe(CO)3]2- (n = 6-14) have been investigated by density functional theory. The low-energy structures of the tricarbonyl dianions [Bn-1Hn-1Fe(CO)3]2- are all found to have closo deltahedral structures in accordance with their 2n+2 skeletal electrons. The low-energy structures of the neutral tricarbonyls Bn-1Hn-1Fe(CO)3 (n = 6-14) with only 2n skeletal electrons are based on capped (n-1)-vertex closo deltahedra (n = 6, 7, 8) or isocloso deltahedra with a degree 6 vertex for the iron atom. The closo 8- and 9-vertex deltahedra are also found in low-energy Bn-1Hn-1Fe(CO)3 structures relating to the nondegeneracy of their frontier molecular orbitals. Carbonyl migration occurs in most of the low-energy structures of the tetracarbonyls Bn-1Hn-1Fe(CO)4. Thus, migration of a carbonyl group from an iron atom to a boron atom gives closo Bn-2Hn-2(BCO)(µ-H)Fe(CO)3 structures with a BCO vertex and a hydrogen atom bridging a B-B deltahedral edge. In other low-energy Bn-1Hn-1Fe(CO)4 structures, a carbonyl group is inserted into the central n-vertex FeBn-1 deltahedron to give a Bn-1Hn-1(CO)Fe(CO)3 structure with a central (n+1)-vertex FeCBn-1 deltahedron that can be an isocloso deltahedron or a µ3-BH face-capped n-vertex FeCBn-2 closo deltahedron. Other low-energy Bn-1Hn-1Fe(CO)4 structures include Bn-1Hn-1Fe(CO)2(µ-CO)2 structures with two of the carbonyl groups bridging FeB2 faces (n = 6, 7, 10) or Fe-B edges (n = 12) or structures in which a closo Bn-1Hn-1 ligand (n = 6, 7, 10, 12) is bonded to an Fe(CO)4 unit with exclusively terminal carbonyl groups through B-H-Fe bridges.

3.
Molecules ; 28(7)2023 Mar 27.
Artigo em Inglês | MEDLINE | ID: mdl-37049751

RESUMO

The geometries and energetics of the n-vertex polyhedral dicobaltadithiaboranes and dicobaltadiselenaboranes Cp2Co2E2Bn-4Hn-4 (E = S, Se; n = 8 to 12) have been investigated via the density functional theory. Most of the lowest-energy structures in these systems are generated from the (n + 1)-vertex most spherical closo deltahedra by removal of a single vertex, leading to a tetragonal, pentagonal, or hexagonal face depending on the degree of the vertex removed. In all of these low-energy structures, the chalcogen atoms are located at the vertices of the non-triangular face. Alternatively, the central polyhedron in most of the 12-vertex structures can be derived from a Co2E2B8 icosahedron with adjacent chalcogen (E) vertices by breaking the E-E edge and 1 or more E-B edges to create a hexagonal face. Examples of the arachno polyhedra with two tetragonal and/or pentagonal faces derived from the removal of two vertices from isocloso deltahedra were found among the set of lowest-energy Cp2Co2E2Bn-4Hn-4 (E = S, Se; n = 8 and 12) structures.

4.
Inorg Chem ; 61(51): 20793-20803, 2022 Dec 26.
Artigo em Inglês | MEDLINE | ID: mdl-36520992

RESUMO

Density functional studies show that the singlet spin-state flattened oblatocloso deltahedral structures found experimentally in the dimetallaboranes Cp*2Re2Bn-2Hn-2 (Cp* = Me5C5; n = 8-12) of the third row group 7 element rhenium are not favored for analogous dimetallaboranes Cp2Mn2Bn-2Hn-2 (n = 8-14) of its first row congener manganese. Instead, the energetically preferred structures for the dimanganaboranes are higher spin-state triplet and quintet spin-state structures. This appears to be related to the lower ligand field splittings in complexes of the first row transition-metal manganese relative to analogous complexes of the third row transition-metal rhenium. The lowest-energy Cp2Mn2Bn-2Hn-2 (n = 8-13) structures typically have a central MnBn-2 closo deltahedron with one face capped by the second CpMn unit. However, for the 14-vertex Cp2Mn2B12H12 system the lowest-energy structures consist of B12 icosahedra with faces capped by both CpMn units. The thermochemistry of cluster buildup reactions of the type Cp2Mn2Bn-2Hn-2 + BH → Cp2Mn2Bn-1Hn-1 suggests that the 11- and 13-vertex structures are likely to be favored products in reactions of cyclopentadienylmanganese derivatives with borane sources. The paramagnetism of the predicted triplet and quintet spin states for the lowest-energy dimanganaboranes Cp2Mn2Bn-2Hn-2 (n = 8-14) suggests possible applications in novel magnetic materials.

5.
Chemphyschem ; 21(17): 1957-1965, 2020 09 02.
Artigo em Inglês | MEDLINE | ID: mdl-32643260

RESUMO

Tritopic ion-pair receptors can bind bivalent salts in solution; yet, these salts have a tendency to form ion-pairs even in the absence of receptors. The extent to which such receptors can enhance ion pairing has however remained elusive. Here, we study ion pairing of M2+ (Ba2+ , Sr2+ ) and X- (I- , ClO4- ) in acetonitrile with and without a dichlorooxacalix[2]arene[2]triazine-related receptor containing a pentaethylene-glycol moiety. We find marked ion association already in receptor-free solutions. When present, most of the MX+ ion-pairs are bound to the receptor and the overall degree of ion association is enhanced due to coordinative, hydrogen-bonding, and anion-π interactions. The receptor shows higher selectivity for iodides but also stabilizes perchlorates, despite the latter are often considered as weakly coordinating anions. Our results show that ion-pair binding is strongly correlated to ion pairing in these solutions, thereby highlighting the importance of taking ion association in organic solvents into account.

6.
Phys Chem Chem Phys ; 22(4): 2437-2448, 2020 Jan 29.
Artigo em Inglês | MEDLINE | ID: mdl-31939955

RESUMO

The diferratetracarbaboranes Cp2Fe2C4Bn-6Hn-2 (n = 10 to 14; Cp = η5-C5H5) as well as the experimentally known C-tetramethyl derivatives Cp2Fe2C4Me4B8H8 have been studied by density functional theory methods. For the Cp2Fe2C4Me4B8H8 system, the three structurally characterized isomers produced under relatively mild conditions having an "open" tetragonal or pentagonal face correspond to the lowest energy structures not based on the 14-vertex closo deltahedron, namely the bicapped hexagonal antiprism. These structures provide examples of kinetically favored but thermodynamically disfavored high-energy metallacarborane structures. Thus the lowest energy such structure lies ∼22 kcal mol-1 above the global minimum, namely a C2vcloso structure with no C-C deltahedral edges. This latter global minimum 14-vertex closo structure is found experimentally to be the ultimate pyrolysis product in the Cp2Fe2C4Me4B8H8 system at 300 °C. The lowest energy structures for the smaller 11 to 13 vertex Cp2Fe2C4Bn-6Hn-2 systems are the corresponding most spherical closo deltahedra as expected by the Wade-Mingos rules for these 2n + 2 skeletal electron systems. However, for the 11- and 12-vertex systems, less spherical deltahedral structures providing additional degree 6 vertices for the iron atoms and degree 4 vertices for the carbon atoms become energetically competitive. For the 10-vertex Cp2Fe2C4B4H8 system a relatively non-spherical deltahedral structure with four degree 4 vertices for the carbon atoms and two degree 6 vertices for the iron atoms is energetically preferred by a substantial margin. Thus such a structure lies ∼23 kcal mol-1 in energy below the isomeric 10-vertex closo bicapped tetragonal antiprism structure expected from the Wade-Mingos rules for this 2n + 2 skeletal electron system.

7.
Inorg Chem ; 58(6): 3825-3837, 2019 Mar 18.
Artigo em Inglês | MEDLINE | ID: mdl-30821466

RESUMO

The dichromadicarbaboranes Cp2Cr2C2B n-4H n-2 ( n = 8-12) related to the icosahedral structure reported in 1983 by Stone and co-workers and formulated by them as Cp2Cr2C2B8H10 have been investigated using density functional theory. In most cases, the lowest-energy structures are flattened oblatocloso structures with degree 6 and 7 chromium vertices similar to the lowest-energy and experimental structures of the isoelectronic dirhenaboranes Cp2Re2B n-2H n-2. However, most isomeric spherical closo deltahedral structures with surface Cr≣Cr quadruple bonds as well as isocloso structures with surface metal-metal Cr≡Cr triple bonds lie at accessible energies, typically lower than those in the corresponding dirhenaborane systems. However, for the 11-vertex Cp2Cr2C2B7H9 system, the most spherical closo/ isocloso deltahedral structure with a degree 6 metal vertex and degree 4 carbon vertices as well as a surface M≡M triple bond lies energetically below the lowest-energy oblatocloso structure. Calculations of the Cr-Cr distances in an icosahedral Cp2Cr2C2B8H10 structure and in a dihydrogenated icosahedral Cp2Cr2(µ-H)2C2B8H10 structure suggest the latter structure for "Cp2Cr2C2B8H10" reported by Stone and co-workers.

8.
Inorg Chem ; 58(10): 6832-6844, 2019 May 20.
Artigo em Inglês | MEDLINE | ID: mdl-31066555

RESUMO

The complexation equilibria between Mg2+ and d-gluconate (Gluc-) ions are of particular importance in modeling the chemical speciation in low- and intermediate-level radioactive waste repositories. NMR measurements and potentiometric titrations conducted at 25 °C and 4 M ionic strength revealed the formation of the MgGluc+, MgGlucOH0, MgGluc(OH)2-, and Mg3Gluc2(OH)40 complexes. The trinuclear species provides indirect evidence for the existence of multinuclear magnesium(II) hydroxido complexes, whose formation was proposed earlier but has not been confirmed yet. Additionally, speciation calculations demonstrated that MgCl2 can markedly decrease the solubility of thorium(IV) at low ligand concentrations. Regarding the structure of MgGluc+, both IR spectra and density functional theory (DFT) calculations indicate the monodentate coordination of Gluc-. By the potentiometric data, the acidity of the water molecules is higher in the MgGluc+ and MgGlucOH0 species than in the Mg(H2O)62+ aqua ion. On the basis of DFT calculations, this ligand-promoted hydrolysis is caused by strong hydrogen bonds forming between Gluc- and Mg(H2O)62+. Conversely, metal-ion-induced ligand deprotonation takes place in the case of calcium(II) complexes, giving rise to salient variations on the NMR spectra in a strongly alkaline medium.

9.
Phys Chem Chem Phys ; 21(39): 22022-22030, 2019 Oct 09.
Artigo em Inglês | MEDLINE | ID: mdl-31559995

RESUMO

Density functional theory studies on the experimentally known Cp*3Rh3B12H12Rh(B4H9RhCp*) as well as the model compounds Cp4Rh4B12H12 and Cp3Rh3B12H12Rh(η3-C3H5) indicate low energy structures with central Rh4B12 tetracapped tetratruncated tetrahedra (TTT) for these 32 Wadean skeletal electron systems. This skeletal electron count corresponds to 2k2 (k = 4) skeletal electrons suggesting a spherical aromatic system with filled 1s + 1p + 1d + 1f molecular orbitals as well as an isocloso 2n (= 32 for n = 16) skeletal electron count. Similar TTT structures are found for the valence isoelectronic 32 skeletal electron systems [Cp4M''4B12H12]4+ (M'' = Ni, Pd, Pt) and [Cp4M'4B12H12]4- (M' = Fe, Ru, Os). The preferred structures of the 34 skeletal electron systems [Cp4M4B12H12]2- (M = Co, Rh, Ir), [Cp4M''4B12H12]2+ (M'' = Ni, Pd, Pt) are not the most spherical TTT despite their 2n + 2 skeletal electron count (= 34 for n = 16) for a closo structure by the Wade-Mingos rules. Instead they are prolate (elongated) polyhedra with two degree 6 and two degree 5 metal vertices with a central M4 macrobutterfly having one long MM distance of ∼5.0 Šbetween the wingtips. The preferred structures for the still electron richer 36 skeletal electron systems Cp4M''4B12H12 (M'' = Pd, Pt) are derived from triple square antiprisms with two open M''2B2 square faces. A distorted version of this polyhedron is the deltahedral structure with four degree 5 metal vertices and four degree 6 boron vertices found in the valence isoelectronic 36 skeletal electron first row transition metal derivatives Cp4Ni4B12H12 and [Cp4Co4B12H12]4-. However, this polyhedron is not found in the 36 skeletal electron [Cp4M4B12H12]4- (M = Rh, Ir), that instead have symmetrical central M4B12 TTTs. For some 16-vertex [Cp4M4B12H12]z systems deviating from the favored 32 skeletal electron count, low-energy structures are found in which hydrogen atoms migrate to bridge B-B edges or bend over to bridge M-B edges. In addition, the hypoelectronic hexacations [Cp4M4B12H12]6+ (M = Co, Rh, Ir; Ni, Pd, Pt) are found to have low-energy structures in which three of the four Cp rings are hydrogenated to give tetrahapto cyclopentadiene η4-C5H6 rings.

10.
Phys Chem Chem Phys ; 21(32): 17779-17785, 2019 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-31372619

RESUMO

The energetically preferred structures of the gold clusters Au9+, Au113+, and Au124+ with eight skeletal electrons have been studied by density functional theory for comparison with the 8-electron Au102+ cluster shown previously to have a highly favored Td tetracapped octahedral structure. The low-energy structures for the Au9+ and Au113+ clusters are found to be similar relatively spherical polyhedra. Such systems can be considered to exhibit spherical aromaticity in accord with their filled 1S21P6 shells, their diatropic NICS(0) values ranging from -21.4 to -44.3 ppm, and their shielding cone surfaces. However, the preferred spherical polyhedra for Au9+ and Au113+ are not the same as the closo deltahedra found in the BnHn2- borane dianions. Instead they have smaller internal cavities formed by capping faces of smaller deltahedra or by formation of internal Au-Au bonds. The lowest energy Au124+ structures are not similar nearly spherical polyhedral structures. Instead they are derived from planar gold subclusters by adding more gold atoms to form tetrahedral Au4 bubbles. The planar origin of the low-energy Au124+ structures relates to the energetic preference for neutral Au<14 clusters for planar structures or nearly planar structures containing small polyhedral bubbles. The presence of σ-holes has been identified on the surfaces of the complete series of the Aun(n-8)+ (n = 9 to 12) clusters. The strength of their electrostatic interactions is predicted to increase upon increasing cluster size.

11.
Molecules ; 25(1)2019 Dec 27.
Artigo em Inglês | MEDLINE | ID: mdl-31892168

RESUMO

The rhenadicarbaborane carbonyl nitrosyls (C2Bn-3Hn-1)Re(CO)2(NO), (n = 8 to 12), of interest in drug delivery agents based on the experimentally known C2B9H11Re(CO)2(NO) and related species, have been investigated by density functional theory. The lowest energy structures of these rhenadicarbaboranes are all found to have central ReC2Bn-3 most spherical closo deltahedra in accord with their 2n + 2 Wadean skeletal electrons. Carbon atoms are found to be located preferentially at degree 4 vertices in such structures. Furthermore, rhenium atoms are preferentially located at a highest degree vertex, typically a vertex of degree 5. Only for the 9-vertex C2B6H8Re(CO)2(NO) system are alternative isocloso deltahedral isomers found within ~8 kcal/mol of the lowest energy closo isomer. Such 9-vertex isocloso structures provide a degree 6 vertex for the rhenium atom flanked by degree 4 vertices for each carbon atom.


Assuntos
Sistemas de Liberação de Medicamentos , Modelos Moleculares , Rênio/química , Isomerismo , Estrutura Molecular
12.
Inorg Chem ; 56(18): 11059-11065, 2017 Sep 18.
Artigo em Inglês | MEDLINE | ID: mdl-28876056

RESUMO

The chromadicarbaboranes CpCrC2Bn-3Hn-1 (8 ≤ n ≤ 12) are of interest in providing stable paramagnetic deltahedral metallaboranes among which the 12-vertex CpCrC2B9H11 has been synthesized by Hawthorne and co-workers. Density functional theory shows that the lowest-energy such structures are quartet spin-state Cr(III) structures in which the central CrC2Bn-3 units exhibit most spherical closo deltahedral geometries similar to those found in the borane dianions BnHn2-. Higher-energy doublet CpCrC2Bn-3Hn-1 (8 ≤ n ≤ 11) structures are found exhibiting central CrC2Bn-3 isocloso deltahedral geometries, thereby providing a degree 6 vertex for the chromium atom. The lowest-energy CpCrC2Bn-3Hn-1 (8 ≤ n ≤ 11) structures all have both carbon atoms at degree 4 vertices. However, the lowest-energy CpCrC2B9H11 structures all have central CrC2B9 icosahedra and thus lack degree 4 vertices for the carbon atoms. For all of the CpCrC2Bn-3Hn-1 (8 ≤ n ≤ 12) systems the lowest-energy isomers are those with the maximum number of Cr-C edges in contrast to the related CpCoC2Bn-3Hn-1 systems.

13.
Inorg Chem ; 56(24): 15015-15025, 2017 Dec 18.
Artigo em Inglês | MEDLINE | ID: mdl-29185721

RESUMO

Density functional theory studies on the rhenatricarbaboranes C3Bn-4Hn-1Re(CO)3 (n = 7-12) show that the lowest energy polyhedra for n-vertex metallaboranes having 2n + 2 skeletal electrons and sufficiently dissimilar vertex atoms can deviate from the most spherical closo deltahedra predicted by application of the Wade-Mingos rules. Furthermore, the lowest energy structures of these rhenatricarbaboranes are found to avoid C-C edges and have carbon atoms located at degree 4 rather than degree 5 vertices. The lowest energy structures for the 7-vertex C3B3H6Re(CO)3 system all have a central C3B3Re closo deltahedron, namely the pentagonal bipyramid with the rhenium atom at a degree 5 axial vertex and all three carbon atoms at degree 4 equatorial vertices. However, the lowest energy structure for the 8-vertex C3B4H7Re(CO)3 is not the most spherical closo 8-vertex deltahedron, namely the bisdisphenoid, but instead a central C3B4Re hexagonal bipyramid with mutually nonadjacent degree 4 vertices for the carbon atoms. Similarly, the lowest energy 10-vertex C3B6H9Re(CO)3 structures are derived from isocloso deltahedra having three degree 4 vertices for all three carbon atoms rather than from the most spherical 10-vertex closo deltahedron, namely the bicapped square antiprism with only two degree 4 vertices. However, for the 9-vertex C3B5H8Re(CO)3 system, the most spherical closo deltahedron, namely the tricapped trigonal prism, has three mutually nonadjacent degree 4 vertices, which is ideal for the three carbon atoms and thus is the preferred deltahedron. The preferred deltahedron for the 11-vertex C3B7H10Re(CO)3 remains the most spherical closo deltahedron despite having only two degree 4 vertices for the carbon atoms. Furthermore, the six lowest energy 12-vertex C3B8H11Re(CO)3 structures are all based on the regular icosahedron generally favored in polyhedral borane chemistry despite its complete lack of degree 4 vertices for the carbon atoms.

14.
Inorg Chem ; 56(1): 351-358, 2017 Jan 03.
Artigo em Inglês | MEDLINE | ID: mdl-27936643

RESUMO

The structures and energetics of the dimetallaboranes Cp2M2Bn-2Hn-2 (n = 8, 9, 10, 11, 12; M = Co, Rh, Ir; Cp = η5-C5H5) were studied using density functional theory. The lowest energy Cp2M2B6H6 and Cp2M2B7H7 structures are chiral C2 structures based on the corresponding closo deltahedra, namely the bisdisphenoid and the tricapped trigonal prism. The permethylated iridaboranes Cp*2Ir2B6H6 and Cp*2Ir2B7H7 (Cp* = η5-Me5C5) were synthesized by Ghosh and co-workers. However, they were found by X-ray crystallography to have nondeltahedral structures containing a quadrilateral face, namely a bicapped trigonal prism and a capped square antiprism for the 8- and 9-vertex systems, respectively. These structures correspond to a mean of the two opposite enantiomers and can also represent the "square" intermediate in the interconversion of the two enantiomers. The lowest energy structures for the 10-vertex Cp2M2B8H8 systems are two isocloso deltahedra with one metal atom at a degree 6 vertex and the other metal atom at a degree 5 vertex. Both isomers have been realized experimentally for Cp2Ir2B8H8. The lowest energy structures for the 11-vertex Cp2M2B9H9 systems have central closo/isocloso deltahedra with one metal atom at a degree 6 vertex and the other metal atom at a nonadjacent degree 5 vertex. This structure type has been found experimentally in both the rhodaboranes and iridaboranes Cp*2M2B9H9 (M = Rh, Ir). The lowest energy structures for the 12-vertex systems Cp2M2B10H10 (M = Co, Rh, Ir) are deltahedra with two adjacent degree 6 vertices for the metal atoms. This type of structure is found experimentally in the rhodium complexes Cp*2Rh2B10H10-n(OH)n (n = 1, 2).

15.
J Comput Chem ; 37(1): 64-9, 2016 Jan 05.
Artigo em Inglês | MEDLINE | ID: mdl-26183318

RESUMO

Density functional theory shows that the lowest energy CpMoC3B(n-4)H(n-1) (n = 8, 9, 10, 11) structures are based on isocloso or similar deltahedra with the molybdenum atom at a degree 6 vertex. Such deltahedra include the capped pentagonal bipyramid for the 8-vertex system. Among such geometries the lowest energy structures have the carbon atoms at the lowest degree vertices (typically degree 4 vertices), no pairs of adjacent carbon atoms (i.e., no C-C edges), and the maximum number of Mo-C edges. Optimizing these factors favoring low-energy CpMoC3B(n-4)H(n-1) (n = 8, 9, 10, 11) structures leads to a unique lowest energy structure lying more than 10 kcal/mol below the next lowest energy structure for the 8-, 10-, and 11-vertex systems. However, the 9-vertex CpMoC3B5H8 system has three structures within 8 kcal/mol including a structure based on the closo tricapped trigonal prism rather than the isocloso 9-vertex deltahedron.

16.
Phys Chem Chem Phys ; 18(17): 11707-10, 2016 04 28.
Artigo em Inglês | MEDLINE | ID: mdl-26726962

RESUMO

Consideration of the well-known very stable icosahedral B12H12(2-) as a three-dimensional analogue of benzene was extended by the recent synthesis of the biicosahedral B21H18(-) as a three-dimensional analogue of naphthalene. The preferred structures of metallaboranes derived from B21H18(-) have now been examined by density functional theory. The isoelectronic species CpNiB20H17 and CpCoCB19H17 have the 46 skeletal electrons expected by the Wade-Mingos and Jemmis rules for a structure consisting of two face-sharing fused icosahedra. The CpM units in these structures energetically prefer to be located at a meta vertex of the biicosahedron. The analogous ferraboranes CpFeB20H17 with only 44 skeletal electrons also have related biicosahedral structures. The presence of an agostic hydrogen atom bridging an Fe-B edge compensates for the two-electron deficiency in CpFeB20H17 relative to CpNiB20H17. The nucleus-independent chemical shift (NICS) values of these systems indicate them to be strongly aromatic.

17.
PLoS Pathog ; 9(10): e1003678, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-24098125

RESUMO

Searching for stimulators of the innate antiviral response is an appealing approach to develop novel therapeutics against viral infections. Here, we established a cell-based reporter assay to identify compounds stimulating expression of interferon-inducible antiviral genes. DD264 was selected out of 41,353 compounds for both its immuno-stimulatory and antiviral properties. While searching for its mode of action, we identified DD264 as an inhibitor of pyrimidine biosynthesis pathway. This metabolic pathway was recently identified as a prime target of broad-spectrum antiviral molecules, but our data unraveled a yet unsuspected link with innate immunity. Indeed, we showed that DD264 or brequinar, a well-known inhibitor of pyrimidine biosynthesis pathway, both enhanced the expression of antiviral genes in human cells. Furthermore, antiviral activity of DD264 or brequinar was found strictly dependent on cellular gene transcription, nuclear export machinery, and required IRF1 transcription factor. In conclusion, the antiviral property of pyrimidine biosynthesis inhibitors is not a direct consequence of pyrimidine deprivation on the virus machinery, but rather involves the induction of cellular immune response.


Assuntos
Infecções por Alphavirus/metabolismo , Antivirais/farmacologia , Vírus Chikungunya/metabolismo , Imunidade Inata/efeitos dos fármacos , Pirimidinas/biossíntese , Infecções por Alphavirus/tratamento farmacológico , Infecções por Alphavirus/genética , Infecções por Alphavirus/imunologia , Animais , Antivirais/química , Febre de Chikungunya , Vírus Chikungunya/genética , Vírus Chikungunya/imunologia , Chlorocebus aethiops , Células HeLa , Humanos , Imunidade Inata/imunologia , Fator Regulador 1 de Interferon/genética , Fator Regulador 1 de Interferon/imunologia , Fator Regulador 1 de Interferon/metabolismo , Pirimidinas/imunologia , Células Vero
18.
Inorg Chem ; 54(23): 11377-84, 2015 Dec 07.
Artigo em Inglês | MEDLINE | ID: mdl-26545039

RESUMO

Theoretical studies on the dicarbalanes C2Al(n-2)Men (n = 7-14; Me = methyl) predict both carbon atoms to be located at degree 4 vertices of a central C2Al(n-2) deltahedron in the lowest energy structures. As a consequence, deltahedra having two degree 4 vertices, two degree 6 vertices, and eight degree 5 vertices rather than the regular icosahedron having exclusively degree 5 vertices are found for the 12-vertex dicarbalane C2Al10Me12. However, the lowest energy C2Al(n-2)Men (n = 7-11) structures are based on the same most spherical (closo) deltahedra as the corresponding deltahedral boranes. The lowest energy structures for the 13- and 14-vertex systems C2Al(n-2)Men (n = 13 and 14) are also deltahedra having exactly two degree 4 vertices for the carbon atoms. The six-vertex C2Al4Me6 system is exceptional since bicapped tetrahedral and capped square pyramidal structures with degree 3 vertices for the carbon atoms are energetically preferred over the octahedral structure suggested by the Wade-Mingos rules.

19.
ACS Omega ; 9(10): 12125-12134, 2024 Mar 12.
Artigo em Inglês | MEDLINE | ID: mdl-38496963

RESUMO

The structures, energetics, and energetically preferred spin states of methylphosphinidene-bridged binuclear cyclopentadienyliron carbonyl complexes MePFe2(CO)nCp2 (n = 4, 3, 2, and 1) related to the experimentally known (µ-RP)Fe2(µ-CO)(CO)2Cp2 (R = cyclohexyl, phenyl, mesityl, and 2,4,6-tBu3C6H2) complexes have been investigated by density functional theory. Singlet structures having a pyramidal pseudotetrahedral phosphorus environment with 18-electron iron configurations are energetically preferred in the tricarbonyl and tetracarbonyl systems MePFe2(CO)nCp2 (n = 4 and 3) with the lowest energy structures of the tricarbonyl very closely resembling the experimentally determined structures. For the more unsaturated dicarbonyl and monocarbonyl systems MePFe2(CO)nCp2 (n = 2 and 1), higher spin state triplet and quintet structures are energetically preferred over singlet structures. These more highly unsaturated structures can be derived from the lowest energy singlet MePFe2(CO)nCp2 (n = 4, 3) by the removal of carbonyl groups. The iron atoms giving up carbonyl groups in their 16- and 14-electron configurations bear the spin density of the unpaired electrons in the higher spin states. The lowest energy singlet structure of the monocarbonyl MePFe2(CO)Cp2, although a relatively high energy isomer, is unusual among the collection of MePFe2(CO)nCp2 (n = 4, 3, 2, and 1) structures by having both the formal Fe=Fe double bond and the four-electron donor MeP unit with the planar phosphorus coordination required to allow each of its iron atoms to attain the favored 18-electron configuration.

20.
J Antimicrob Chemother ; 68(6): 1285-96, 2013 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-23378416

RESUMO

OBJECTIVES: Candida albicans is the most prevalent fungal pathogen of humans, causing a wide range of infections from harmless superficial to severe systemic infections. Improvement of the antifungal arsenal is needed since existing antifungals can be associated with limited efficacy, toxicity and antifungal resistance. Here we aimed to identify compounds that act synergistically with echinocandin antifungals and that could contribute to a faster reduction of the fungal burden. METHODS: A total of 38 758 compounds were tested for their ability to act synergistically with aminocandin, a ß-1,3-glucan synthase inhibitor of the echinocandin family of antifungals. The synergy between echinocandins and an identified hit was studied with chemogenomic screens and testing of individual Saccharomyces cerevisiae and C. albicans mutant strains. RESULTS: We found that colistin, an antibiotic that targets membranes in Gram-negative bacteria, is synergistic with drugs of the echinocandin family against all Candida species tested. The combination of colistin and aminocandin led to faster and increased permeabilization of C. albicans cells than either colistin or aminocandin alone. Echinocandin susceptibility was a prerequisite to be able to observe the synergy. A large-scale screen for genes involved in natural resistance of yeast cells to low doses of the drugs, alone or in combination, identified efficient sphingolipid and chitin biosynthesis as necessary to protect S. cerevisiae and C. albicans cells against the antifungal combination. CONCLUSIONS: These results suggest that echinocandin-mediated weakening of the cell wall facilitates colistin targeting of fungal membranes, which in turn reinforces the antifungal activity of echinocandins.


Assuntos
Antifúngicos/farmacologia , Candida/efeitos dos fármacos , Colistina/farmacologia , Equinocandinas/farmacologia , Animais , Antifúngicos/uso terapêutico , Candida/genética , Candidíase/tratamento farmacológico , Candidíase/microbiologia , Permeabilidade da Membrana Celular/efeitos dos fármacos , Parede Celular/efeitos dos fármacos , Quitina/biossíntese , Colistina/uso terapêutico , Corantes , Sinergismo Farmacológico , Equinocandinas/uso terapêutico , Biblioteca Gênica , Aptidão Genética , Genótipo , Técnicas de Diluição do Indicador , Lipopeptídeos/farmacologia , Camundongos , Camundongos Endogâmicos BALB C , Testes de Sensibilidade Microbiana , Mutação/genética , Propídio , Saccharomyces cerevisiae/efeitos dos fármacos , Saccharomyces cerevisiae/genética , Esfingolipídeos/biossíntese
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