Detalhe da pesquisa
1.
A Conformational Switch in the Zinc Finger Protein Kaiso Mediates Differential Readout of Specific and Methylated DNA Sequences.
Biochemistry
; 59(20): 1909-1926, 2020 05 26.
Artigo
em Inglês
| MEDLINE | ID: mdl-32352758
2.
CH···O Hydrogen Bonds Mediate Highly Specific Recognition of Methylated CpG Sites by the Zinc Finger Protein Kaiso.
Biochemistry
; 57(14): 2109-2120, 2018 04 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-29546986
3.
Transient Hoogsteen base pairs in canonical duplex DNA.
Nature
; 470(7335): 498-502, 2011 Feb 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-21270796
4.
Modulating RNA Alignment Using Directional Dynamic Kinks: Application in Determining an Atomic-Resolution Ensemble for a Hairpin using NMR Residual Dipolar Couplings.
J Am Chem Soc
; 137(40): 12954-65, 2015 Oct 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-26306428
5.
Guanine to inosine substitution leads to large increases in the population of a transient G·C Hoogsteen base pair.
Biochemistry
; 53(46): 7145-7, 2014 Nov 25.
Artigo
em Inglês
| MEDLINE | ID: mdl-25339065
6.
Characterizing RNA dynamics at atomic resolution using solution-state NMR spectroscopy.
Nat Methods
; 8(11): 919-31, 2011 Oct 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-22036746
7.
Characterizing the protonation state of cytosine in transient G·C Hoogsteen base pairs in duplex DNA.
J Am Chem Soc
; 135(18): 6766-9, 2013 May 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-23506098
8.
A historical account of Hoogsteen base-pairs in duplex DNA.
Biopolymers
; 99(12): 955-68, 2013 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-23818176
9.
Structural Plasticity of Pioneer Factor Sox2 and DNA Bendability Modulate Nucleosome Engagement and Sox2-Oct4 Synergism.
J Mol Biol
; 435(2): 167916, 2023 01 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-36495920
10.
Probing sequence-specific DNA flexibility in a-tracts and pyrimidine-purine steps by nuclear magnetic resonance (13)C relaxation and molecular dynamics simulations.
Biochemistry
; 51(43): 8654-64, 2012 Oct 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-23035755
11.
Probing transient Hoogsteen hydrogen bonds in canonical duplex DNA using NMR relaxation dispersion and single-atom substitution.
J Am Chem Soc
; 134(8): 3667-70, 2012 Feb 29.
Artigo
em Inglês
| MEDLINE | ID: mdl-22309937
12.
Thermodynamics of RNA melting, one base pair at a time.
RNA
; 16(9): 1687-91, 2010 Sep.
Artigo
em Inglês
| MEDLINE | ID: mdl-20660079
13.
Intrinsic dynamics of DNA-polymer complexes: a mechanism for DNA release.
Mol Pharm
; 9(9): 2743-9, 2012 Sep 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-22823140
14.
Extending the range of microsecond-to-millisecond chemical exchange detected in labeled and unlabeled nucleic acids by selective carbon R(1rho) NMR spectroscopy.
J Am Chem Soc
; 131(11): 3818-9, 2009 Mar 25.
Artigo
em Inglês
| MEDLINE | ID: mdl-19243182
15.
Preparation, resonance assignment, and preliminary dynamics characterization of residue specific 13C/15N-labeled elongated DNA for the study of sequence-directed dynamics by NMR.
J Biomol NMR
; 45(1-2): 9-16, 2009 Sep.
Artigo
em Inglês
| MEDLINE | ID: mdl-19636798
16.
m(1)A and m(1)G disrupt A-RNA structure through the intrinsic instability of Hoogsteen base pairs.
Nat Struct Mol Biol
; 23(9): 803-10, 2016 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-27478929
17.
Widespread transient Hoogsteen base pairs in canonical duplex DNA with variable energetics.
Nat Commun
; 5: 4786, 2014 Sep 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-25185517
18.
Single VS ribozyme molecules reveal dynamic and hierarchical folding toward catalysis.
J Mol Biol
; 382(2): 496-509, 2008 Oct 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-18656481