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1.
J Am Chem Soc ; 143(6): 2509-2522, 2021 02 17.
Artigo em Inglês | MEDLINE | ID: mdl-33544575

RESUMO

Organometallic gold complexes are used in a range of catalytic reactions, and they often serve as catalyst precursors that mediate C-C bond formation. In this study, we investigate C-C coupling to form ethane from various phosphine-ligated gem-digold(I) methyl complexes including [Au2(µ-CH3)(PMe2Ar')2][NTf2], [Au2(µ-CH3)(XPhos)2][NTf2], and [Au2(µ-CH3)(tBuXPhos)2][NTf2] {Ar' = C6H3-2,6-(C6H3-2,6-Me)2, C6H3-2,6-(C6H2-2,4,6-Me)2, C6H3-2,6-(C6H3-2,6-iPr)2, or C6H3-2,6-(C6H2-2,4,6-iPr)2; XPhos = 2-dicyclohexylphosphino-2',4',6'-triisopropylbiphenyl; tBuXPhos = 2-di-tert-butylphosphino-2',4',6'-triisopropylbiphenyl; NTf2 = bis(trifluoromethyl sulfonylimide)}. The gem-digold methyl complexes are synthesized through reaction between Au(CH3)L and Au(L)(NTf2) {L = phosphines listed above}. For [Au2(µ-CH3)(XPhos)2][NTf2] and [Au2(µ-CH3)(tBuXPhos)2][NTf2], solid-state X-ray structures have been elucidated. The rate of ethane formation from [Au2(µ-CH3)(PMe2Ar')2][NTf2] increases as the steric bulk of the phosphine substituent Ar' decreases. Monitoring the rate of ethane elimination reactions by multinuclear NMR spectroscopy provides evidence for a second-order dependence on the gem-digold methyl complexes. Using experimental and computational evidence, it is proposed that the mechanism of C-C coupling likely involves (1) cleavage of [Au2(µ-CH3)(PMe2Ar')2][NTf2] to form Au(PR2Ar')(NTf2) and Au(CH3)(PMe2Ar'), (2) phosphine migration from a second equivalent of [Au2(µ-CH3)(PMe2Ar')2][NTf2] aided by binding of the Lewis acidic [Au(PMe2Ar')]+, formed in step 1, to produce [Au2(CH3)(PMe2Ar')][NTf2] and [Au2(PMe2Ar')]+, and (3) recombination of [Au2(CH3)(PMe2Ar')][NTf2] and Au(CH3)(PMe2Ar') to eliminate ethane.

2.
An Acad Bras Cienc ; 93(1): e20180534, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33787681

RESUMO

This study evaluate growth, gas exchange, solute accumulation and activity of antioxidant enzymes in dwarf cashew clones subjected to salinity. Shoot dry mass reduced 26.8% (CCP06) and 41.2% (BRS189) at 16 dS m-1, concerning control. For net photosynthesis, CCP06 and BRS189 presented 69.8% and 34.7% of reduction, respectively. Na+ and Cl- contents increased in leaves and roots, in both clones, although CCP06 leaves presented Na+ concentrations lower than those of BRS189, the first one was the clone that the most accumulated such toxic ion, whereas K+ content remained almost unchanged for both clones. Soluble N-amino was the organic solute that more varied with salinity in cashew seedlings. Salt stress increased the activity of superoxide dismutase in both clones, mainly 16 dS m-1 treatment. Additionally, salinity promoted increases in ascorbate and guaiacol peroxidase activities, and the last enzyme was the main involved in H2O2 removal. Despite the reductions in growth and gas exchange, dwarf cashew seedlings of both clones presented an osmotic adjustment mechanism, and an efficient enzymatic antioxidant system that were able to attenuate the salt and oxidative stress, respectively. Our research suggested that BRS189 clone is more tolerant to salt stress than CCP06.


Assuntos
Anacardium , Antioxidantes , Células Clonais , Peróxido de Hidrogênio , Folhas de Planta , Salinidade
3.
Chemistry ; 26(45): 10330-10335, 2020 Aug 12.
Artigo em Inglês | MEDLINE | ID: mdl-32329536

RESUMO

A family of phosphine ligands containing a five-membered ring similar to the popular N-heterocyclic carbene ligands and an alkoxy third substituent has been developed. These alkoxydiaminophosphine ligands (ADAP) can be generated in one pot and reacted with a copper(I) source leading to the high yield isolation of complexes [(ADAP)CuX]2 (X=Cl, Br). The dinuclear nature of these compounds has been established by means of X-ray studies and DOSY experiments. A screening of the catalytic properties of these complexes toward carbene-transfer reactions from diazocompounds to C-H bonds (alkane, arene), olefins or N-H bonds, as well as in CuAAC or nitrene transfer reactions have shown a performance at least similar, if not better, than their (NHC)CuCl analogues, opening a new window in copper catalysis with these readily tunable ADAP ligands.

4.
Molecules ; 25(3)2020 Jan 29.
Artigo em Inglês | MEDLINE | ID: mdl-32013217

RESUMO

A straightforward method for the preparation of trisphosphinite ligands in one step, using only commercially available reagents (1,1,1-tris(4-hydroxyphenyl)ethane and chlorophosphines) is described. We have made use of this approach to prepare a small family of four trisphosphinite ligands of formula [CH3C{(C6H4OR2)3], where R stands for Ph (1a), Xyl (1b, Xyl = 2,6-Me2-C6H3), iPr (1c), and Cy (1d). These polyfunctional phosphinites allowed us to investigate their coordination chemistry towards a range of late transition metal precursors. As such, we report here the isolation and full characterization of a number of Au(I), Ag(I), Cu(I), Ir(III), Rh(III) and Ru(II) homotrimetallic complexes, including the structural characterization by X-ray diffraction studies of six of these compounds. We have observed that the flexibility of these trisphosphinites enables a variety of conformations for the different trimetallic species.


Assuntos
Compostos Organometálicos/química , Indicadores e Reagentes/química , Ligantes , Modelos Moleculares , Fosfinas/química , Difração de Raios X
5.
Nature ; 504(7478): 172-6, 2013 Dec 05.
Artigo em Inglês | MEDLINE | ID: mdl-24162852

RESUMO

Members of the CD36 superfamily of scavenger receptor proteins are important regulators of lipid metabolism and innate immunity. They recognize normal and modified lipoproteins, as well as pathogen-associated molecular patterns. The family consists of three members: SR-BI (which delivers cholesterol to the liver and steroidogenic organs and is a co-receptor for hepatitis C virus), LIMP-2/LGP85 (which mediates lysosomal delivery of ß-glucocerebrosidase and serves as a receptor for enterovirus 71 and coxsackieviruses) and CD36 (a fatty-acid transporter and receptor for phagocytosis of effete cells and Plasmodium-infected erythrocytes). Notably, CD36 is also a receptor for modified lipoproteins and ß-amyloid, and has been implicated in the pathogenesis of atherosclerosis and of Alzheimer's disease. Despite their prominent roles in health and disease, understanding the function and abnormalities of the CD36 family members has been hampered by the paucity of information about their structure. Here we determine the crystal structure of LIMP-2 and infer, by homology modelling, the structure of SR-BI and CD36. LIMP-2 shows a helical bundle where ß-glucocerebrosidase binds, and where ligands are most likely to bind to SR-BI and CD36. Remarkably, the crystal structure also shows the existence of a large cavity that traverses the entire length of the molecule. Mutagenesis of SR-BI indicates that the cavity serves as a tunnel through which cholesterol(esters) are delivered from the bound lipoprotein to the outer leaflet of the plasma membrane. We provide evidence supporting a model whereby lipidic constituents of the ligands attached to the receptor surface are handed off to the membrane through the tunnel, accounting for the selective lipid transfer characteristic of SR-BI and CD36.


Assuntos
Antígenos CD36/metabolismo , Proteínas de Membrana Lisossomal/química , Modelos Moleculares , Animais , Células CHO , Cricetulus , Células HeLa , Humanos , Proteínas de Membrana Lisossomal/metabolismo , Ligação Proteica , Estrutura Terciária de Proteína
6.
Plant Cell Physiol ; 58(3): 522-536, 2017 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-28158828

RESUMO

An effective strategy for re-establishing K+ and Na+ homeostasis is a challenge for the improvement of plant performance in saline soil. Specifically, attempts to understand the mechanisms of Na+ extrusion from plant cells, the control of Na+ loading in the xylem and the partitioning of the accumulated Na+ between different plant organs are ongoing. Our goal was to provide insight into how an external nitrogen source affects Na+ accumulation in Sorghum bicolor under saline conditions. The NH4+ supply improved the salt tolerance of the plant by restricting Na+ accumulation and improving the K+/Na+ homeostasis in shoots, which was consistent with the high activity and expression of Na+/H+ antiporters and proton pumps in the plasma membrane and vacuoles in the roots, resulting in low Na+ loading in the xylem. Conversely, although NO3--grown plants had exclusion and sequestration mechanisms for Na+, these responses were not sufficient to reduce Na+ accumulation. In conclusion, NH4+ acts as an efficient signal to activate co-ordinately responses involved in the regulation of Na+ homeostasis in sorghum plants under salt stress, which leads to salt tolerance.


Assuntos
Compostos de Amônio/metabolismo , Raízes de Plantas/metabolismo , Bombas de Próton/metabolismo , Tolerância ao Sal/fisiologia , Trocadores de Sódio-Hidrogênio/metabolismo , Sódio/metabolismo , Sorghum/metabolismo , Adenosina Trifosfatases/análise , Antiporters/genética , Antiporters/metabolismo , Proteínas de Transporte de Cátions/metabolismo , Membrana Celular/metabolismo , Regulação da Expressão Gênica de Plantas , Genes de Plantas/genética , Homeostase , Nitrogênio/metabolismo , Potássio/metabolismo , Cloreto de Sódio/metabolismo , Trocadores de Sódio-Hidrogênio/genética , Vacúolos/metabolismo , Xilema/metabolismo
7.
Malar J ; 16(1): 292, 2017 07 19.
Artigo em Inglês | MEDLINE | ID: mdl-28724415

RESUMO

BACKGROUND: The recent reduction in mortality due to malaria is being threatened by the appearance of Plasmodium falciparum parasites that are resistant to artemisinin in Southeast Asia. To limit the impact of resistant parasites and their spread across the world, there is a need to validate anti-malarial drug targets and identify new leads that will serve as foundations for future drug development programmes targeting malaria. Towards that end, the antiplasmodial potential of several Hsp90 inhibitors was characterized. Because, the Hsp90 chaperone has been suggested as a good drug target against multiple parasitic infections including malaria. RESULTS: Chemically diverse sets of Hsp90 inhibitors, evaluated in clinical trials as anti-cancer agents, were tested against the malaria parasite. Most of the compounds showed strong antiplasmodial activity in growth inhibition assays against chloroquine sensitive and resistant strains. There was a good agreement between the compound in vitro anti-parasitic activity and their affinity against the Plasmodium chaperone. The two most potent Hsp90 inhibitors also showed cytocidal activity against two P. falciparum strains. Their antiplasmodial activity affected all parasite forms during the malaria blood cycle. However, the compounds activity against the parasite showed no synergy when combined with anti-malarial drugs, like chloroquine or DHA. DISCUSSION: The Hsp90 inhibitors anti-parasitic activity correlates with their affinity to their predicted target the P. falciparum chaperone Hsp90. However, the most effective compounds also showed high affinity for a close homologue, Grp94. This association points to a mode of action for Hsp90 inhibitors that correlate compound efficacy with multi-target engagement. Besides their ability to limit parasite replication, two compounds also significantly impacted P. falciparum viability in vitro. Finally, a structural analysis suggests that the best hit represents a promising scaffold to develop parasite specific leads according. CONCLUSION: The results shown that Hsp90 inhibitors are lethal against the malaria parasite. The correlation between biochemical and in vitro data strongly supports Hsp90 as a drug target against the malaria parasite. Furthermore, at least one Hsp90 inhibitor developed as anticancer therapeutics could serve as starting point to generate P. falciparum-specific lead compounds.


Assuntos
Antimaláricos/farmacologia , Inibidores Enzimáticos/farmacologia , Proteínas de Choque Térmico HSP90/antagonistas & inibidores , Malária Falciparum/tratamento farmacológico , Plasmodium falciparum/enzimologia , Proteínas de Choque Térmico HSP90/genética , Proteínas de Choque Térmico HSP90/metabolismo , Plasmodium falciparum/genética
8.
Bioorg Med Chem ; 25(10): 2754-2760, 2017 05 15.
Artigo em Inglês | MEDLINE | ID: mdl-28377170

RESUMO

This study measured the antiplasmodial activity of nine zinc-dipicolylamine (ZnDPA) complexes against three strains of Plasmodium falciparum, the causative parasite of malaria. Growth inhibition assays showed significant activity against all tested strains, with 50% inhibitory concentrations between 5 and 600nM and almost no toxic effect against host cells including healthy red blood cells. Fluorescence microscopy studies with a green-fluorescent ZnDPA probe showed selective targeting of infected red blood cells. The results suggest that ZnDPA coordination complexes are promising antiplasmodial agents with potential for targeted malaria treatment.


Assuntos
Antimaláricos/química , Complexos de Coordenação/química , Compostos Organometálicos/química , Picolinas/química , Animais , Antimaláricos/síntese química , Antimaláricos/uso terapêutico , Antimaláricos/toxicidade , Células CHO , Proliferação de Células/efeitos dos fármacos , Complexos de Coordenação/síntese química , Complexos de Coordenação/uso terapêutico , Complexos de Coordenação/toxicidade , Cricetinae , Cricetulus , Eritrócitos/efeitos dos fármacos , Eritrócitos/parasitologia , Hemólise/efeitos dos fármacos , Humanos , Malária/tratamento farmacológico , Microscopia de Fluorescência , Plasmodium falciparum/efeitos dos fármacos
9.
Mol Microbiol ; 96(1): 95-109, 2015 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-25582232

RESUMO

Leishmania are kinetoplastid parasites that cause the sandfly-transmitted disease leishmaniasis. To maintain fitness throughout their infectious life cycle, Leishmania must undergo rapid metabolic adaptations to the dramatically distinct environments encountered during transition between sandfly and vertebrate hosts. We performed proteomic and immunoblot analyses of attenuated L. major strains deficient for LACK, the Leishmania ortholog of the mammalian receptor for activated c kinase (RACK1), that is important for parasite thermotolerance and virulence. This approach identified cytochrome c oxidase (LmCOX) subunit IV as a LACK-dependent fitness protein. Consistent with decreased levels of LmCOX subunit IV at mammalian temperature, and in amastigotes, LmCOX activity and mitochondrial function were also impaired in LACK-deficient L. major under these conditions. Importantly, overexpression of LmCOX subunit IV in LACK-deficient L. major restored thermotolerance and macrophage infectivity. Interestingly, overexpression of LmCOX subunit IV enhanced LmCOX subunit VI expression at mammalian temperature. Collectively, our data suggest LACK promotes Leishmania adaptation to the mammalian host environment by sustaining LmCOX subunit IV expression and hence energy metabolism in response to stress stimuli such as heat. These findings extend the repertoire of RACK1 protein utility to include a role in mitochondrial function.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/genética , Complexo IV da Cadeia de Transporte de Elétrons/fisiologia , Aptidão Genética , Leishmania major/metabolismo , Mitocôndrias/metabolismo , Proteínas de Protozoários/genética , Proteínas de Protozoários/metabolismo , Temperatura Alta , Immunoblotting , Leishmania major/genética , Leishmania major/patogenicidade , Estágios do Ciclo de Vida , Macrófagos/parasitologia , Peptídeos/metabolismo , Proteômica , Receptores de Quinase C Ativada
10.
Proc Natl Acad Sci U S A ; 108(6): 2414-9, 2011 Feb 08.
Artigo em Inglês | MEDLINE | ID: mdl-21262824

RESUMO

γδ T cells play important roles in bridging innate and adaptive immunity, but their recognition mechanisms remain poorly understood. Human γδ T cells of the V(δ)1 subset predominate in intestinal epithelia and respond to MICA and MICB (MHC class I chain-related, A and B; MIC) self-antigens, mediating responses to tumorigenesis or viral infection. The crystal structure of an MIC-reactive V(δ)1 γδ T-cell receptor (TCR) showed expected overall structural homology to antibodies, αß, and other γδ TCRs, but complementary determining region conformations and conservation of V(δ)1 use revealed an uncharacteristically flat potential binding surface. MIC, likewise, serves as a ligand for the activating immunoreceptor natural killer group 2, D (NKG2D), also expressed on γδ T cells. Although MIC recognition drives both the TCR-dependent stimulatory and NKG2D-dependent costimulatory signals necessary for activation, interaction analyses showed that MIC binding by the two receptors was mutually exclusive. Analysis of relative binding kinetics suggested sequential recognition, defining constraints for the temporal organization of γδ T-cell/target cell interfaces.


Assuntos
Antígenos de Histocompatibilidade Classe I/química , Receptores de Antígenos de Linfócitos T gama-delta/química , Regiões Determinantes de Complementaridade/química , Regiões Determinantes de Complementaridade/imunologia , Cristalografia por Raios X , Antígenos de Histocompatibilidade Classe I/imunologia , Humanos , Imunidade Inata/imunologia , Subfamília K de Receptores Semelhantes a Lectina de Células NK/imunologia , Neoplasias/imunologia , Estrutura Quaternária de Proteína , Receptores de Antígenos de Linfócitos T gama-delta/imunologia , Linfócitos T/química , Linfócitos T/imunologia , Viroses/imunologia
11.
Dalton Trans ; 53(22): 9590-9595, 2024 Jun 04.
Artigo em Inglês | MEDLINE | ID: mdl-38775650

RESUMO

ortho-N-Substituted pyridinium cations with the weakly coordinating anion [B(C6F5)4]- have been studied and crucial structural features in the sp2 C-H borylation catalysis of 3-methylthiophene have been identified. The electron-deficiency of the aromatic core of the cation is essential for activity together with accessible protons. The spectroscopic yield of the borylation of 3-methylthiophene with catecholborane (CatBH) was optimized up to 86% and the method was further applied to other substrates such as N-alkylbenzenes. A mechanistic DFT study revealed the rate-limiting step in the catalysis to be the liberation of molecular H2 (ΔG‡ = 27.5 kcal mol-1), whereas the overall reaction was found to be exergonic by 5.1 kcal mol-1.

12.
Mol Biochem Parasitol ; 255: 111574, 2023 09.
Artigo em Inglês | MEDLINE | ID: mdl-37150327

RESUMO

Leishmania parasites undergo morphological changes during their infectious life cycle, including developmental transitions within the sandfly vector, culminating in metacyclic stages that are pre-adapted for infection. Upon entering vertebrate host phagocytes, Leishmania differentiate into intracellular amastigotes, the form that is ultimately transmitted back to the vector to complete the life cycle. Although environmental conditions that induce these cellular transitions are well-established, molecular mechanisms governing Leishmania morphologic differentiation in response to these cues remain largely uncharacterized. Previous studies indicate a key role for HSP83 in both promastigote metacyclogenesis and amastigote differentiation. To further elucidate HSP83 functions in the Leishmania lifecycle, we examined the biological impact of experimentally elevating HSP83 gene expression in Leishmania. Significantly, HSP83 overexpression was associated with altered metacyclic morphology, increased protein kinase A (PKA) activity and decreased expression of the Leishmania major surface protease, GP63. Corroborating these findings, overexpression of the L. amazonensis PKA catalytic subunit resulted in a largely similar phenotype. Our findings demonstrate for the first time in Leishmania, a functional link between HSP83 and PKA in the control of Leishmania gene expression, replication and morphogenesis.


Assuntos
Leishmania major , Leishmania mexicana , Animais , Peptídeo Hidrolases , Proteínas de Choque Térmico , Leishmania mexicana/genética , Leishmania major/genética , Animais Geneticamente Modificados , Proteínas Quinases Dependentes de AMP Cíclico
13.
BMC Struct Biol ; 12: 2, 2012 Mar 19.
Artigo em Inglês | MEDLINE | ID: mdl-22429898

RESUMO

BACKGROUND: Plasmodium falciparum is the protozoan parasite primarily responsible for more than one million malarial deaths, annually, and is developing resistance to current therapies. Throughout its lifespan, the parasite is subjected to oxidative attack, so Plasmodium antioxidant defences are essential for its survival and are targets for disease control. RESULTS: To further understand the molecular aspects of the Plasmodium redox system, we solved 4 structures of Plasmodium peroxiredoxins (Prx). Our study has confirmed PvTrx-Px1 to be a hydrogen peroxide (H2O2)-sensitive peroxiredoxin. We have identified and characterized the novel toroid octameric oligomer of PyTrx-Px1, which may be attributed to the interplay of several factors including: (1) the orientation of the conserved surface/buried arginine of the NNLA(I/L)GRS-loop; and (2) the C-terminal tail positioning (also associated with the aforementioned conserved loop) which facilitates the intermolecular hydrogen bond between dimers (in an A-C fashion). In addition, a notable feature of the disulfide bonds in some of the Prx crystal structures is discussed. Finally, insight into the latter stages of the peroxiredoxin reaction coordinate is gained. Our structure of PyPrx6 is not only in the sulfinic acid (RSO2H) form, but it is also with glycerol bound in a way (not previously observed) indicative of product binding. CONCLUSIONS: The structural characterization of Plasmodium peroxiredoxins provided herein provides insight into their oligomerization and product binding which may facilitate the targeting of these antioxidant defences. Although the structural basis for the octameric oligomerization is further understood, the results yield more questions about the biological implications of the peroxiredoxin oligomerization, as multiple toroid configurations are now known. The crystal structure depicting the product bound active site gives insight into the overoxidation of the active site and allows further characterization of the leaving group chemistry.


Assuntos
Peroxirredoxinas/química , Peroxirredoxinas/metabolismo , Plasmodium/enzimologia , Multimerização Proteica , Sequência de Aminoácidos , Animais , Domínio Catalítico , Cristalografia por Raios X , Dissulfetos/química , Glicerol/metabolismo , Humanos , Peróxido de Hidrogênio/metabolismo , Modelos Moleculares , Dados de Sequência Molecular , Oxirredução , Ligação Proteica , Estrutura Quaternária de Proteína , Ratos , Ácidos Sulfínicos/metabolismo
14.
Nat Chem Biol ; 6(8): 602-9, 2010 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-20581821

RESUMO

The lipocalins are secreted proteins that bind small organic molecules. Scn-Ngal (also known as neutrophil gelatinase associated lipocalin, siderocalin, lipocalin 2) sequesters bacterial iron chelators, called siderophores, and consequently blocks bacterial growth. However, Scn-Ngal is also prominently expressed in aseptic diseases, implying that it binds additional ligands and serves additional functions. Using chemical screens, crystallography and fluorescence methods, we report that Scn-Ngal binds iron together with a small metabolic product called catechol. The formation of the complex blocked the reactivity of iron and permitted its transport once introduced into circulation in vivo. Scn-Ngal then recycled its iron in endosomes by a pH-sensitive mechanism. As catechols derive from bacterial and mammalian metabolism of dietary compounds, the Scn-Ngal-catechol-Fe(III) complex represents an unforeseen microbial-host interaction, which mimics Scn-Ngal-siderophore interactions but instead traffics iron in aseptic tissues. These results identify an endogenous siderophore, which may link the disparate roles of Scn-Ngal in different diseases.


Assuntos
Proteínas de Fase Aguda/metabolismo , Catecóis/metabolismo , Ferro/sangue , Rim/metabolismo , Lipocalinas/metabolismo , Proteínas Oncogênicas/metabolismo , Proteínas de Fase Aguda/química , Animais , Catecóis/sangue , Catecóis/química , Linhagem Celular , Cromatografia Líquida de Alta Pressão , Biologia Computacional , Cristalografia por Raios X , Endossomos/metabolismo , Corantes Fluorescentes , Humanos , Ferro/química , Quelantes de Ferro/metabolismo , Ligantes , Lipocalina-2 , Lipocalinas/sangue , Lipocalinas/química , Camundongos , Proteínas Oncogênicas/sangue , Proteínas Oncogênicas/química , Ligação Proteica , Proteínas Recombinantes/química , Sideróforos/metabolismo
15.
An Acad Bras Cienc ; 84(3): 823-32, 2012 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-22886166

RESUMO

Cereus jamacaru, a Cactaceae found throughout northeast Brazil, is widely used as cattle food and as an ornamental and medicinal plant. However, there has been little information about the physiological and biochemical aspects involved in its germination. The aim of this study was to investigate its reserve mobilization during germination and early seedling growth. For this, C. jamacaru seeds were germinated in a growth chamber and collected at 0, 2, 4, 5, 6, 8 and 12 days after imbibition for morphological and biochemical analyses. Dry seeds had wrinkled seed coats and large, curved embryos. Lipids were the most abundant reserve, comprising approximately 55% and 65% of the dry mass for cotyledons and the hypocotylradicle axis, respectively. Soluble sugars and starch were the minor reserves, corresponding to approximately 2.2% of the cotyledons' dry mass, although their levels showed significant changes during germination. Soluble proteins corresponded to 40% of the cotyledons' dry mass, which was reduced by 81% at the final period of germination compared to dry seeds. C. jamacaru seed can be classified as an oil seed due to its high lipid content. Moreover, lipids were the main reserve mobilized during germination because their levels were strongly reduced after seed germination, while proteins were the second most utilized reserve in this process.


Assuntos
Cactaceae/crescimento & desenvolvimento , Germinação/fisiologia , Plântula/fisiologia , Sementes/química , Sementes/fisiologia , Brasil , Cactaceae/classificação
16.
ACS Catal ; 12(12): 6851-6856, 2022 Jun 17.
Artigo em Inglês | MEDLINE | ID: mdl-35756859

RESUMO

The complete regioselective incorporation of carbene units to nonactivated arene rings has been achieved employing gold(I) catalysts bearing alkoxydiaminophosphine ligands, with readily available, nonelaborated ethyl 2-phenyldiazoacetate as the carbene source. These results are in contrast with the scarce precedents which required highly elaborated diazo substrates. Density functional theory (DFT) calculations have revealed the important role of the R group in the C(R)CO2Et fragment, which dramatically affects the energy profile of this transformation.

17.
ACS Catal ; 12(7): 4227-4241, 2022 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-35391904

RESUMO

A series of gold(I)-ethylene π-complexes containing a family of bulky phosphine ligands has been prepared. The use of these sterically congested ligands is crucial to stabilize the gold(I)-ethylene bond and prevent decomposition, boosting up their catalytic performance in the highly underexplored hydroamination of ethylene. The precatalysts bearing the most sterically demanding phosphines showed the best results reaching full conversion to the hydroaminated products under notably mild conditions (1 bar of ethylene pressure at 60 °C). Kinetic analysis together with density functional theory calculations revealed that the assistance of a second molecule of the nucleophile as a proton shuttle is preferred even when using an extremely congested cavity-shaped Au(I) complex. In addition, we have measured a strong primary kinetic isotopic effect that is consistent with the involvement of X-H bond-breaking events in the protodeauration turnover-limiting step.

18.
Proteins ; 79(3): 803-20, 2011 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-21287613

RESUMO

We recently determined the first structures of inactivated and calcium-activated calcium-dependent protein kinases (CDPKs) from Apicomplexa. Calcium binding triggered a large conformational change that constituted a new mechanism in calcium signaling and a novel EF-hand fold (CAD, for CDPK activation domain). Thus we set out to determine if this mechanism was universal to all CDPKs. We solved additional CDPK structures, including one from the species Plasmodium. We highlight the similarities in sequence and structure across apicomplexan and plant CDPKs, and strengthen our observations that this novel mechanism could be universal to canonical CDPKs. Our new structures demonstrate more detailed steps in the mechanism of calcium activation and possible key players in regulation. Residues involved in making the largest conformational change are the most conserved across Apicomplexa, leading us to propose that the mechanism is indeed conserved. CpCDPK3_CAD and PfCDPK_CAD were captured at a possible intermediate conformation, lending insight into the order of activation steps. PfCDPK3_CAD adopts an activated fold, despite having an inactive EF-hand sequence in the N-terminal lobe. We propose that for most apicomplexan CDPKs, the mode of activation will be similar to that seen in our structures, while specific regulation of the inactive and active forms will require further investigation.


Assuntos
Proteínas Quinases/química , Sequência de Aminoácidos , Ativação Enzimática , Modelos Moleculares , Dados de Sequência Molecular , Conformação Proteica , Proteínas Quinases/metabolismo , Homologia de Sequência de Aminoácidos
19.
Proteins ; 79 Suppl 10: 6-20, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-22020785

RESUMO

One goal of the CASP community wide experiment on the critical assessment of techniques for protein structure prediction is to identify the current state of the art in protein structure prediction and modeling. A fundamental principle of CASP is blind prediction on a set of relevant protein targets, that is, the participating computational methods are tested on a common set of experimental target proteins, for which the experimental structures are not known at the time of modeling. Therefore, the CASP experiment would not have been possible without broad support of the experimental protein structural biology community. In this article, several experimental groups discuss the structures of the proteins which they provided as prediction targets for CASP9, highlighting structural and functional peculiarities of these structures: the long tail fiber protein gp37 from bacteriophage T4, the cyclic GMP-dependent protein kinase Iß dimerization/docking domain, the ectodomain of the JTB (jumping translocation breakpoint) transmembrane receptor, Autotaxin in complex with an inhibitor, the DNA-binding J-binding protein 1 domain essential for biosynthesis and maintenance of DNA base-J (ß-D-glucosyl-hydroxymethyluracil) in Trypanosoma and Leishmania, an so far uncharacterized 73 residue domain from Ruminococcus gnavus with a fold typical for PDZ-like domains, a domain from the phycobilisome core-membrane linker phycobiliprotein ApcE from Synechocystis, the heat shock protein 90 activators PFC0360w and PFC0270w from Plasmodium falciparum, and 2-oxo-3-deoxygalactonate kinase from Klebsiella pneumoniae.


Assuntos
Biologia Computacional/métodos , Modelos Moleculares , Proteínas/química , Sequência de Aminoácidos , Animais , Bacteriófago T4/química , Proteínas Quinases Dependentes de GMP Cíclico/química , Proteínas de Ligação a DNA/química , Humanos , Klebsiella pneumoniae/química , Klebsiella pneumoniae/enzimologia , Leishmania/química , Dados de Sequência Molecular , Diester Fosfórico Hidrolases/química , Fosfotransferases (Aceptor do Grupo Álcool)/química , Plasmodium falciparum/química , Conformação Proteica , Dobramento de Proteína , Proteínas de Protozoários/química , Trypanosoma/química , Proteínas Virais/química
20.
Proc Natl Acad Sci U S A ; 105(18): 6696-701, 2008 May 06.
Artigo em Inglês | MEDLINE | ID: mdl-18448674

RESUMO

The NKG2x/CD94 (x = A, C, E) natural killer-cell receptors perform an important role in immunosurveillance by binding to HLA-E complexes that exclusively present peptides derived from MHC class I leader sequences, thereby monitoring MHC class I expression. We have determined the crystal structure of the NKG2A/CD94/HLA-E complex at 4.4-A resolution, revealing two critical aspects of this interaction. First, the C-terminal region of the peptide, which displays the most variability among class I leader sequences, interacts entirely with CD94, the invariant component of these receptors. Second, residues 167-170 of NKG2A/C account for the approximately 6-fold-higher affinity of the inhibitory NKG2A/CD94 receptor compared to its activating NKG2C/CD94 counterpart. These residues do not contact HLA-E or peptide directly but instead form part of the heterodimer interface with CD94. An evolutionary analysis across primates reveals that whereas CD94 is evolving under purifying selection, both NKG2A and NKG2C are evolving under positive selection. Specifically, residues at the CD94 interface have evolved under positive selection, suggesting that the evolution of these genes is driven by an interaction with pathogen-derived ligands. Consistent with this possibility, we show that NKG2C/CD94, but not NKG2A/CD94, weakly but specifically binds to the CMV MHC-homologue UL18. Thus, the evolution of the NKG2x/CD94 family of receptors has likely been shaped both by the need to bind the invariant HLA-E ligand and the need to avoid subversion by pathogen-derived decoys.


Assuntos
Antígenos de Histocompatibilidade Classe I/imunologia , Subfamília D de Receptores Semelhantes a Lectina de Células NK/química , Receptores Imunológicos/química , Sequência de Aminoácidos , Proteínas do Capsídeo/química , Proteínas do Capsídeo/metabolismo , Humanos , Cinética , Modelos Moleculares , Dados de Sequência Molecular , Proteínas Mutantes/química , Subfamília C de Receptores Semelhantes a Lectina de Células NK , Ligação Proteica , Estrutura Secundária de Proteína , Receptores de Células Matadoras Naturais , Alinhamento de Sequência
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