Detalhe da pesquisa
1.
Development and validation of blood tumor mutational burden reference standards.
Genes Chromosomes Cancer
; 62(3): 121-130, 2023 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-36326821
2.
Emergence of chromatin hierarchical loops from protein disorder and nucleosome asymmetry.
Proc Natl Acad Sci U S A
; 117(13): 7216-7224, 2020 03 31.
Artigo
em Inglês
| MEDLINE | ID: mdl-32165536
3.
The Impact of the HydroxyMethylCytosine epigenetic signature on DNA structure and function.
PLoS Comput Biol
; 17(11): e1009547, 2021 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-34748533
4.
Determination of a Structural Ensemble Representing the Dynamics of a G-Quadruplex DNA.
Biochemistry
; 59(4): 379-388, 2020 02 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-31815441
5.
Parmbsc1: a refined force field for DNA simulations.
Nat Methods
; 13(1): 55-8, 2016 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-26569599
6.
How accurate are accurate force-fields for B-DNA?
Nucleic Acids Res
; 45(7): 4217-4230, 2017 04 20.
Artigo
em Inglês
| MEDLINE | ID: mdl-28088759
7.
Chromatin Unfolding by Epigenetic Modifications Explained by Dramatic Impairment of Internucleosome Interactions: A Multiscale Computational Study.
J Am Chem Soc
; 137(32): 10205-15, 2015 Aug 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-26192632
8.
Synthesis and properties of 2'-deoxy-2',4'-difluoroarabinose-modified nucleic acids.
J Org Chem
; 80(6): 3083-91, 2015 Mar 20.
Artigo
em Inglês
| MEDLINE | ID: mdl-25723361
9.
Can A Denaturant Stabilize DNA? Pyridine Reverses DNA Denaturation in Acidic pH.
Angew Chem Int Ed Engl
; 54(36): 10488-91, 2015 Sep 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-26224143
10.
Structure and dynamics of oligonucleotides in the gas phase.
Angew Chem Int Ed Engl
; 54(2): 467-71, 2015 Jan 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-25417598
11.
MD and NMR analyses of choline and TMA binding to duplex DNA: on the origins of aberrant sequence-dependent stability by alkyl cations in aqueous and water-free solvents.
J Am Chem Soc
; 136(8): 3075-86, 2014 Feb 26.
Artigo
em Inglês
| MEDLINE | ID: mdl-24490755
12.
Understanding the connection between epigenetic DNA methylation and nucleosome positioning from computer simulations.
PLoS Comput Biol
; 9(11): e1003354, 2013.
Artigo
em Inglês
| MEDLINE | ID: mdl-24278005
13.
Molecular basis of substrate-induced permeation by an amino acid antiporter.
Proc Natl Acad Sci U S A
; 108(10): 3935-40, 2011 Mar 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-21368142
14.
Dramatic effect of furanose C2' substitution on structure and stability: directing the folding of the human telomeric quadruplex with a single fluorine atom.
J Am Chem Soc
; 135(14): 5344-7, 2013 Apr 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-23521511
15.
Design of peptide-membrane interactions to modulate single-file water transport through modified gramicidin channels.
Biophys J
; 103(8): 1698-705, 2012 Oct 17.
Artigo
em Inglês
| MEDLINE | ID: mdl-23083713
16.
Structure of triplex DNA in the gas phase.
J Am Chem Soc
; 134(15): 6596-606, 2012 Apr 18.
Artigo
em Inglês
| MEDLINE | ID: mdl-22420643
17.
Nucleotide binding switches the information flow in ras GTPases.
PLoS Comput Biol
; 7(3): e1001098, 2011 Mar.
Artigo
em Inglês
| MEDLINE | ID: mdl-21390270
18.
Differential stability of 2'F-ANA*RNA and ANA*RNA hybrid duplexes: roles of structure, pseudohydrogen bonding, hydration, ion uptake and flexibility.
Nucleic Acids Res
; 38(7): 2498-511, 2010 Apr.
Artigo
em Inglês
| MEDLINE | ID: mdl-20071751
19.
G-quadruplex DNA structures in human stem cells and differentiation.
Nat Commun
; 13(1): 142, 2022 01 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-35013231
20.
Conformationally rigid nucleoside probes help understand the role of sugar pucker and nucleobase orientation in the thrombin-binding aptamer.
Nucleic Acids Res
; 37(17): 5589-601, 2009 Sep.
Artigo
em Inglês
| MEDLINE | ID: mdl-19620215