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1.
Sci Rep ; 11(1): 12037, 2021 06 08.
Artigo em Inglês | MEDLINE | ID: mdl-34103582

RESUMO

The interbasin exchange between the Sea of Okhotsk and the North Pacific governs the intermediate water ventilation and fertilization of the nutrient-rich subpolar Pacific, and thus has an enormous influence on the North Pacific. However, the mechanism of this exchange is puzzling; current studies have not explained how the western boundary current (WBC) of the subarctic North Pacific intrudes only partially into the Sea of Okhotsk. High-resolution models often exhibit unrealistically small exchanges, as the WBC overshoots passing by deep straits and does not induce exchange flows. Therefore, partial intrusion cannot be solely explained by large-scale, wind-driven circulation. Here, we demonstrate that tidal forcing is the missing mechanism that drives the exchange by steering the WBC pathway. Upstream of the deep straits, tidally-generated topographically trapped waves over a bank lead to cross-slope upwelling. This upwelling enhances bottom pressure, thereby steering the WBC pathway toward the deep straits. The upwelling is identified as the source of joint-effect-of-baroclinicity-and-relief (JEBAR) in the potential vorticity equation, which is caused by tidal oscillation instead of tidally-enhanced vertical mixing. The WBC then hits the island chain and induces exchange flows. This tidal control of WBC pathways is applicable on subpolar and polar regions globally.

2.
ISME J ; 14(2): 560-568, 2020 02.
Artigo em Inglês | MEDLINE | ID: mdl-31685937

RESUMO

The circadian clock coordinates cellular functions over the diel cycle in many organisms. The molecular mechanisms of the cyanobacterial clock are well characterized, but its ecological role remains a mystery. We present an agent-based model of Synechococcus (harboring a self-sustained, bona fide circadian clock) that explicitly represents genes (e.g., kaiABC), transcripts, proteins, and metabolites. The model is calibrated to data from laboratory experiments with wild type and no-clock mutant strains, and it successfully reproduces the main observed patterns of glycogen metabolism. Comparison of wild type and no-clock mutant strains suggests a main benefit of the clock is due to energy management. For example, it inhibits glycogen synthesis early in the day when it is not needed and energy is better used for making the photosynthesis apparatus. To explore the ecological role of the clock, we integrate the model into a dynamic, three-dimensional global circulation model that includes light variability due to seasonal and diel incident radiation and vertical extinction. Model output is compared with field data, including in situ gene transcript levels. We simulate cyanobaceria with and without a circadian clock, which allows us to quantify the fitness benefit of the clock. Interestingly, the benefit is weakest in the low latitude open ocean, where Prochlorococcus (lacking a self-sustained clock) dominates. However, our attempt to experimentally validate this testable prediction failed. Our study provides insights into the role of the clock and an example for how models can be used to integrate across multiple levels of biological organization.


Assuntos
Relógios Circadianos , Cianobactérias , Biologia Marinha , Proteínas de Bactérias/genética , Ritmo Circadiano , Cianobactérias/genética , Cianobactérias/metabolismo , Metabolismo Energético , Genes Bacterianos , Oceanos e Mares , Fotossíntese , Prochlorococcus/genética , Prochlorococcus/metabolismo , Synechococcus/genética , Synechococcus/metabolismo
3.
Sci Rep ; 9(1): 556, 2019 Jan 24.
Artigo em Inglês | MEDLINE | ID: mdl-30679478

RESUMO

It is reported that turbulent mixing is enhanced in the South China Sea (SCS), and it is highly variable in both space and time. Generation and breaking of internal tides has been identified as the main process to drive turbulent mixing in the SCS, while the contributions from other processes are not clear enough. Here we investigate the potential contribution from mesoscale eddies to turbulent mixing in the SCS using a high resolution numerical simulation. Our results show that mesoscale eddies in the SCS effectively dissipate over complex rough topography and indicate that the generation of submesoscale motions and lee waves are two pathways for the transfer of mesoscale eddy energy down to small dissipation scales. The energy loss from mesoscale eddies near the Xisha Islands is estimated to be sufficient to sustain turbulent kinetic energy dissipation rate of O (10-8) W/kg. This study suggests an alternative and potentially efficient mechanism to internal tides for the local maintenance of turbulent mixing in the SCS.

4.
Sci Rep ; 6: 20153, 2016 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-26831954

RESUMO

Predictability of atmospheric variability is known to be limited owing to significant uncertainty that arises from intrinsic variability generated independently of external forcing and/or boundary conditions. Observed atmospheric variability is therefore regarded as just a single realization among different dynamical states that could occur. In contrast, subject to wind, thermal and fresh-water forcing at the surface, the ocean circulation has been considered to be rather deterministic under the prescribed atmospheric forcing, and it still remains unknown how uncertain the upper-ocean circulation variability is. This study evaluates how much uncertainty the oceanic interannual variability can potentially have, through multiple simulations with an eddy-resolving ocean general circulation model driven by the observed interannually-varying atmospheric forcing under slightly different conditions. These ensemble "hindcast" experiments have revealed substantial uncertainty due to intrinsic variability in the extratropical ocean circulation that limits potential predictability of its interannual variability, especially along the strong western boundary currents (WBCs) in mid-latitudes, including the Kuroshio and its eastward extention. The intrinsic variability also greatly limits potential predictability of meso-scale oceanic eddy activity. These findings suggest that multi-member ensemble simulations are essential for understanding and predicting variability in the WBCs, which are important for weather and climate variability and marine ecosystems.

5.
Nat Commun ; 5: 5636, 2014 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-25501039

RESUMO

Ocean eddies (with a size of 100-300 km), ubiquitous in satellite observations, are known to represent about 80% of the total ocean kinetic energy. Recent studies have pointed out the unexpected role of smaller oceanic structures (with 1-50 km scales) in generating and sustaining these eddies. The interpretation proposed so far invokes the internal instability resulting from the large-scale interaction between upper and interior oceanic layers. Here we show, using a new high-resolution simulation of the realistic North Pacific Ocean, that ocean eddies are instead sustained by a different process that involves small-scale mixed-layer instabilities set up by large-scale atmospheric forcing in winter. This leads to a seasonal evolution of the eddy kinetic energy in a very large part of this ocean, with an amplitude varying by a factor almost equal to 2. Perspectives in terms of the impacts on climate dynamics and future satellite observational systems are briefly discussed.

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