Detalhe da pesquisa
1.
EnzymeML: seamless data flow and modeling of enzymatic data.
Nat Methods
; 20(3): 400-402, 2023 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-36759590
2.
SBML Level 3: an extensible format for the exchange and reuse of biological models.
Mol Syst Biol
; 16(8): e9110, 2020 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-32845085
3.
Deep learning and generative methods in cheminformatics and chemical biology: navigating small molecule space intelligently.
Biochem J
; 477(23): 4559-4580, 2020 12 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-33290527
4.
Rapid prototyping of microbial production strains for the biomanufacture of potential materials monomers.
Metab Eng
; 60: 168-182, 2020 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-32335188
5.
Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data.
PLoS Biol
; 15(6): e2001414, 2017 Jun.
Artigo
em Inglês
| MEDLINE | ID: mdl-28662064
6.
VAE-Sim: A Novel Molecular Similarity Measure Based on a Variational Autoencoder.
Molecules
; 25(15)2020 Jul 29.
Artigo
em Inglês
| MEDLINE | ID: mdl-32751155
7.
PartsGenie: an integrated tool for optimizing and sharing synthetic biology parts.
Bioinformatics
; 34(13): 2327-2329, 2018 07 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-29949952
8.
Selenzyme: enzyme selection tool for pathway design.
Bioinformatics
; 34(12): 2153-2154, 2018 06 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-29425325
9.
A repository for quality-assured data on enzyme activity.
Nature
; 556(7701): 309, 2018 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-29670271
10.
SBOL Visual: A Graphical Language for Genetic Designs.
PLoS Biol
; 13(12): e1002310, 2015 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-26633141
11.
ChEBI in 2016: Improved services and an expanding collection of metabolites.
Nucleic Acids Res
; 44(D1): D1214-9, 2016 Jan 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-26467479
12.
Bioinformatics for the synthetic biology of natural products: integrating across the Design-Build-Test cycle.
Nat Prod Rep
; 33(8): 925-32, 2016 Aug 27.
Artigo
em Inglês
| MEDLINE | ID: mdl-27185383
13.
SYNBIOCHEM-a SynBio foundry for the biosynthesis and sustainable production of fine and speciality chemicals.
Biochem Soc Trans
; 44(3): 675-7, 2016 06 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-27284023
14.
GeneGenie: optimized oligomer design for directed evolution.
Nucleic Acids Res
; 42(Web Server issue): W395-400, 2014 Jul.
Artigo
em Inglês
| MEDLINE | ID: mdl-24782527
15.
Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently.
Chem Soc Rev
; 44(5): 1172-239, 2015 Mar 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-25503938
16.
SpeedyGenesXL: an Automated, High-Throughput Platform for the Preparation of Bespoke Ultralarge Variant Libraries for Directed Evolution.
Methods Mol Biol
; 2461: 67-83, 2022.
Artigo
em Inglês
| MEDLINE | ID: mdl-35727444
17.
EnzymeML-a data exchange format for biocatalysis and enzymology.
FEBS J
; 289(19): 5864-5874, 2022 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-34890097
18.
The automated Galaxy-SynBioCAD pipeline for synthetic biology design and engineering.
Nat Commun
; 13(1): 5082, 2022 08 29.
Artigo
em Inglês
| MEDLINE | ID: mdl-36038542
19.
A QconCAT informatics pipeline for the analysis, visualization and sharing of absolute quantitative proteomics data.
Proteomics
; 11(2): 329-33, 2011 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-21204260
20.
MassGenie: A Transformer-Based Deep Learning Method for Identifying Small Molecules from Their Mass Spectra.
Biomolecules
; 11(12)2021 11 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-34944436