Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 55
Filtrar
1.
J Biopharm Stat ; 33(6): 830-843, 2023 11 02.
Artigo em Inglês | MEDLINE | ID: mdl-36710384

RESUMO

Bayesian methods have been proposed as a natural fit for pediatric extrapolation, as they allow the incorporation of relevant external data to reduce the required sample size and hence trial burden for the pediatric patient population. In this paper we will discuss our experience and perspectives with these methods in pediatric trials. We will present some of the background and thinking underlying pediatric extrapolation and discuss the use of Bayesian methods within this context. We will present two recent case examples illustrating the value of a Bayesian approach in this setting and present perspectives on some of the issues that we have encountered in these and other cases.


Assuntos
Projetos de Pesquisa , Criança , Humanos , Teorema de Bayes , Tamanho da Amostra
2.
BMC Med Res Methodol ; 22(1): 118, 2022 04 21.
Artigo em Inglês | MEDLINE | ID: mdl-35448963

RESUMO

BACKGROUND: Pediatric population presents several barriers for clinical trial design and analysis, including ethical constraints on the sample size and slow accrual rate. Bayesian adaptive design methods could be considered to address these challenges in pediatric clinical trials. METHODS: We developed an innovative Bayesian adaptive design method and demonstrated the approach as a re-design of a published phase III pediatric trial. The innovative design used early success criteria based on skeptical prior and early futility criteria based on enthusiastic prior extrapolated from a historical adult trial, and the early and late stopping boundaries were calibrated to ensure a one-sided type I error of 2.5%. We also constructed several alternative designs which incorporated only one type of prior belief and the same stopping boundaries. To identify a preferred design, we compared operating characteristics including power, expected trial size and trial duration for all the candidate adaptive designs via simulation when performing an increasing number of equally spaced interim analyses. RESULTS: When performing an increasing number of equally spaced interim analyses, the innovative Bayesian adaptive trial design incorporating both skeptical and enthusiastic priors at both interim and final analyses outperforms alternative designs which only consider one type of prior belief, because it allows more reduction in sample size and trial duration while still offering good trial design properties including controlled type I error rate and sufficient power. CONCLUSIONS: Designing a Bayesian adaptive pediatric trial with both skeptical and enthusiastic priors can be an efficient and robust approach for early trial stopping, thus potentially saving time and money for trial conduction.


Assuntos
Futilidade Médica , Projetos de Pesquisa , Teorema de Bayes , Criança , Ensaios Clínicos como Assunto , Simulação por Computador , Humanos , Tamanho da Amostra
3.
J Pediatr ; 163(3): 855-9, 2013 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-23582137

RESUMO

OBJECTIVE: To facilitate further assessment of transfusion-associated lead exposure by designing a procedure to test packed red blood cells (pRBCs) prepared for transfusion. STUDY DESIGN: The relationship between pRBCs and whole blood lead concentration was investigated in 27 samples using a modified clinical assay. Lead concentrations were measured in 100 pRBC units. RESULTS: Our sample preparation method demonstrated a correlation between whole blood lead and pRBC lead concentrations (R(2) = 0.82). In addition, all 100 pRBC units tested had detectable lead levels. The median pRBC lead concentration was 0.8 µg/dL, with an SD of 0.8 µg/dL and a range of 0.2-4.1 µg/dL. In addition, after only a few days of storage, approximately 25% of whole blood lead was found in the supernatant plasma. CONCLUSION: Transfusion of pRBCs is a source of lead exposure. Here we report the quantification of lead concentration in pRBCs. We found a >20-fold range of lead concentrations in the samples tested. Pretransfusion testing of pRBC units according to our proposed approach or donor screening of whole blood lead and selection of below-average units for transfusion to children would diminish an easily overlooked source of pediatric lead exposure.


Assuntos
Segurança do Sangue/métodos , Poluentes Ambientais/sangue , Transfusão de Eritrócitos/efeitos adversos , Intoxicação do Sistema Nervoso por Chumbo na Infância/prevenção & controle , Chumbo/sangue , Eritrócitos/química , Humanos , Intoxicação do Sistema Nervoso por Chumbo na Infância/etiologia , Espectrometria de Massas , Plasma/química
4.
Ther Innov Regul Sci ; 57(3): 436-444, 2023 05.
Artigo em Inglês | MEDLINE | ID: mdl-36459346

RESUMO

The Center for Drug Evaluation and Research (CDER) and the Center for Biologics Evaluation and Research (CBER) of the U.S. Food and Drug Administration (FDA) have been leaders in protecting and promoting the U.S. public health by helping to ensure that safe and effective drugs and biological products are available in the United States for those who need them. The null hypothesis significance testing approach, along with other considerations, is typically used to demonstrate the effectiveness of a drug or biological product. The Bayesian framework presents an alternative approach to demonstrate the effectiveness of a treatment. This article discusses the Bayesian framework for drug and biological product development, highlights key settings in which Bayesian approaches may be appropriate, and provides recent examples of the use of Bayesian approaches within CDER and CBER.


Assuntos
Produtos Biológicos , Humanos , Estados Unidos , Preparações Farmacêuticas , Avaliação de Medicamentos , Teorema de Bayes , United States Food and Drug Administration
5.
J Marital Fam Ther ; 49(4): 899-917, 2023 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-37649260

RESUMO

Despite the common use of religious buffers, African Americans are disproportionately affected by depressive symptoms. Communal coping may serve as one factor in helping religious African American couples alleviate the symptoms of depression. This study examines the association between relational sanctification and depressive symptoms as mediated by the communal coping of 467 African American married and cohabiting couples. Data from the sampled couples were analyzed using a common fate model, and analyses revealed higher scores on the measure of sanctification were associated with more communal coping; more communal coping was associated with fewer depressive symptoms among women and men, and communal coping acted as a mediator between relational sanctification and depressive symptoms in both partners. Findings from this study underscore the importance of considering how the religiosity and cooperative action of African American couples relate to depressive symptoms.

6.
Circulation ; 123(8): 896-903, 2011 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-21321157

RESUMO

BACKGROUND: There is debate concerning whether an aneurysmal ascending aorta should be replaced when associated with a dysfunctioning aortic valve that is to be replaced. To examine this issue, we divided the patients by type of aortic valve dysfunction-either aortic stenosis (AS) or pure aortic regurgitation (AR)-something not previously undertaken. METHODS AND RESULTS: Of 122 patients with ascending aortic aneurysm (unassociated with aortitis or acute dissection), the aortic valve was congenitally malformed (unicuspid or bicuspid) in 58 (98%) of the 59 AS patients, and in 38 (60%) of the 63 pure AR patients. Ascending aortic medial elastic fiber loss (EFL) (graded 0 to 4+) was zero or 1+ in 53 (90%) of the AS patients, in 20 (53%) of the 38 AR patients with bicuspid valves, and in all 12 AR patients with tricuspid valves unassociated with the Marfan syndrome. An unadjusted analysis showed that, among the 96 patients with congenitally malformed valves, the 38 AR patients had a significantly higher likelihood of 2+ to 4+ EFL than the 58 AS patients (crude odds ratio: 8.78; 95% confidence interval: 2.95, 28.13). CONCLUSIONS: These data strongly suggest that the type of aortic valve dysfunction-AS versus pure AR-is very helpful in predicting loss of aortic medial elastic fibers in patients with ascending aortic aneurysms and aortic valve disease.


Assuntos
Aorta/patologia , Aorta/cirurgia , Aneurisma Aórtico/cirurgia , Insuficiência da Valva Aórtica/cirurgia , Estenose da Valva Aórtica/cirurgia , Valva Aórtica/patologia , Valva Aórtica/cirurgia , Adulto , Idoso , Idoso de 80 Anos ou mais , Valva Aórtica/fisiopatologia , Pressão Sanguínea/fisiologia , Tecido Elástico/patologia , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Valva Mitral/patologia , Tamanho do Órgão/fisiologia , Estudos Retrospectivos , Sístole/fisiologia , Valva Tricúspide/patologia
7.
BMC Genomics ; 13: 9, 2012 Jan 09.
Artigo em Inglês | MEDLINE | ID: mdl-22229964

RESUMO

BACKGROUND: Desirable apple varieties are clonally propagated by grafting vegetative scions onto rootstocks. Rootstocks influence many phenotypic traits of the scion, including resistance to pathogens such as Erwinia amylovora, which causes fire blight, the most serious bacterial disease of apple. The purpose of the present study was to quantify rootstock-mediated differences in scion fire blight susceptibility and to identify transcripts in the scion whose expression levels correlated with this response. RESULTS: Rootstock influence on scion fire blight resistance was quantified by inoculating three-year old, orchard-grown apple trees, consisting of 'Gala' scions grafted to a range of rootstocks, with E. amylovora. Disease severity was measured by the extent of shoot necrosis over time. 'Gala' scions grafted to G.30 or MM.111 rootstocks showed the lowest rates of necrosis, while 'Gala' on M.27 and B.9 showed the highest rates of necrosis. 'Gala' scions on M.7, S.4 or M.9F56 had intermediate necrosis rates. Using an apple DNA microarray representing 55,230 unique transcripts, gene expression patterns were compared in healthy, un-inoculated, greenhouse-grown 'Gala' scions on the same series of rootstocks. We identified 690 transcripts whose steady-state expression levels correlated with the degree of fire blight susceptibility of the scion/rootstock combinations. Transcripts known to be differentially expressed during E. amylovora infection were disproportionately represented among these transcripts. A second-generation apple microarray representing 26,000 transcripts was developed and was used to test these correlations in an orchard-grown population of trees segregating for fire blight resistance. Of the 690 transcripts originally identified using the first-generation array, 39 had expression levels that correlated with fire blight resistance in the breeding population. CONCLUSIONS: Rootstocks had significant effects on the fire blight susceptibility of 'Gala' scions, and rootstock-regulated gene expression patterns could be correlated with differences in susceptibility. The results suggest a relationship between rootstock-regulated fire blight susceptibility and sorbitol dehydrogenase, phenylpropanoid metabolism, protein processing in the endoplasmic reticulum, and endocytosis, among others. This study illustrates the utility of our rootstock-regulated gene expression data sets for candidate trait-associated gene data mining.


Assuntos
Resistência à Doença , Erwinia amylovora/fisiologia , Regulação da Expressão Gênica de Plantas , Malus/genética , Análise por Conglomerados , Resistência à Doença/genética , Erwinia amylovora/isolamento & purificação , Malus/metabolismo , Malus/microbiologia , Análise de Sequência com Séries de Oligonucleotídeos , Doenças das Plantas/genética , Doenças das Plantas/microbiologia
8.
Biomedicines ; 10(1)2022 Jan 06.
Artigo em Inglês | MEDLINE | ID: mdl-35052798

RESUMO

The addictive properties of psychostimulants such as cocaine, amphetamine, methamphetamine, and methylphenidate are based on their ability to increase dopaminergic neurotransmission in the reward system. While cocaine and methamphetamine are predominately used recreationally, amphetamine and methylphenidate also work as effective therapeutics to treat symptoms of disorders including attention deficit and hyperactivity disorder (ADHD) and autism spectrum disorder (ASD). Although both the addictive properties of psychostimulant drugs and their therapeutic efficacy are influenced by genetic variation, very few genes that regulate these processes in humans have been identified. This is largely due to population heterogeneity which entails a requirement for large samples. Drosophila melanogaster exhibits similar psychostimulant responses to humans, a high degree of gene conservation, and allow performance of behavioral assays in a large population. Additionally, amphetamine and methylphenidate reduce impairments in fly models of ADHD-like behavior. Therefore, Drosophila represents an ideal translational model organism to tackle the genetic components underlying the effects of psychostimulants. Here, we break down the many assays that reliably quantify the effects of cocaine, amphetamine, methamphetamine, and methylphenidate in Drosophila. We also discuss how Drosophila is an efficient and cost-effective model organism for identifying novel candidate genes and molecular mechanisms involved in the behavioral responses to psychostimulant drugs.

9.
J Exp Med ; 201(10): 1669-76, 2005 May 16.
Artigo em Inglês | MEDLINE | ID: mdl-15897280

RESUMO

Staphylococcus aureus is a major pathogen of gram-positive septic shock and frequently is associated with consumption of plasma kininogen. We examined the vascular leakage (VL) activity of two cysteine proteinases that are secreted by S. aureus. Proteolytically active staphopain A (ScpA) induced VL in a bradykinin (BK) B(2)-receptor-dependent manner in guinea pig skin. This effect was augmented by staphopain B (SspB), which, by itself, had no VL activity. ScpA also produced VL activity from human plasma, apparently by acting directly on kininogens to release BK, which again was augmented significantly by SspB. Intravenous injection of ScpA into a guinea pig caused BK B(2)-receptor-dependent hypotension. ScpA and SspB together induced the release of leucyl-methionyl-lysyl-BK, a novel kinin with VL and blood pressure-lowering activities that are equivalent to BK. Collectively, these data suggest that production of BK and leucyl-methionyl-lysyl-BK by staphopains is a new mechanism of S. aureus virulence and bacterial shock. Therefore, staphopain-specific inhibitors and kinin-receptor antagonists could be used to treat this disease.


Assuntos
Proteínas de Bactérias/metabolismo , Vasos Sanguíneos/patologia , Bradicinina/metabolismo , Cisteína Endopeptidases/metabolismo , Infecções Estafilocócicas/patologia , Staphylococcus aureus/enzimologia , Animais , Proteínas de Bactérias/administração & dosagem , Pressão Sanguínea/efeitos dos fármacos , Vasos Sanguíneos/metabolismo , Cisteína Endopeptidases/administração & dosagem , Feminino , Cobaias , Hipotensão/induzido quimicamente , Injeções Intravenosas , Masculino , Receptor B2 da Bradicinina , Infecções Estafilocócicas/metabolismo , Infecções Estafilocócicas/microbiologia , Staphylococcus aureus/patogenicidade
10.
Plant Dis ; 95(3): 269-278, 2011 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-30743507

RESUMO

Harvest bunch rot of wine grape, caused primarily by Botrytis cinerea, is a perennial problem limiting the productivity of eastern vineyards, especially on cultivars with compact clusters. The aim of the present study was to evaluate the effectiveness of gibberellic acid (GA) sprays at reducing the compactness of Chardonnay and Vignoles clusters and minimizing bunch rot. Applications of GA reduced the number of berries per centimeter and the incidence and severity of bunch rots in Vignoles and, to a lesser extent, in Chardonnay over three consecutive years; however, the magnitude of GA effects often depended on the timing and rate of application. Bloom GA applications were more effective (P < 0.001) at reducing compactness and bunch rots than prebloom applications. Significantly, negative effects of GA applications on yield were negligible based on data from 4 years of trials on single vines and 2 years of data on 24-vine plots of Vignoles, provided the rates did not exceed 25 ppm. Regression analysis showed that berries per centimeter accounted for between 89 and 94% of variation in the incidence of Botrytis rot on Vignoles. On Chardonnay, compactness accounted for 53% of the variation in incidence, and the estimated compactness level at which no bunch rot would occur was 4.40 ± 1.05 (mean ± standard error) berries per centimeter. The relationship between cluster compactness and spray coverage of berries was also investigated in two separate experiments. Spray coverage of individual berries decreased linearly as cluster compactness increased within the range tested (3 to 18 berries per centimeter). Cluster compactness accounted for two-thirds of the variation in individual berry coverage, and coverage was reduced by 40 to 50% for clusters with about 18 berries per centimeter. These results strongly support the use of GA in integrated management of bunch rot on Vignoles and Chardonnay in eastern U.S. vineyards.

11.
J Clin Pharmacol ; 61 Suppl 1: S165-S174, 2021 06.
Artigo em Inglês | MEDLINE | ID: mdl-34185895

RESUMO

The use of extrapolation of efficacy in pediatric drug development programs is possible when disease progression and treatment response are similar in adult and pediatric populations. Historically, the exposure-response (E-R) similarity was assessed by visual inspection of 2 E-R curves to support pediatric extrapolation. The aim of this study was to develop a quantitative framework to describe the E-R relationship and the difference in E-R between pediatric and adult patients based on accumulated experience in pediatric drug development programs. Using clinical data for 8 drugs with either a linear or nonlinear E-R relationship, we adapted the methodology used in noninferiority testing to assess the E-R similarity between adult and pediatric patients at the targeted drug exposure. We implemented bootstrap-based and Bayesian-based methodologies to estimate the probability of concluding noninferiority of the E-R relationship. This approach provides objective criteria that can be applied to an assessment of E-R noninferiority in 2 populations to support extrapolation of efficacy in drug development programs from adults to pediatric populations.


Assuntos
Relação Dose-Resposta a Droga , Desenvolvimento de Medicamentos/métodos , Pediatria/métodos , Adulto , Criança , Interpretação Estatística de Dados , Aprovação de Drogas/métodos , Cálculos da Dosagem de Medicamento , Humanos , Probabilidade , Estados Unidos , United States Food and Drug Administration
12.
Phytopathology ; 100(6): 539-50, 2010 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-20465409

RESUMO

The gram-negative bacterium Erwinia amylovora is the causal agent of fire blight, the most destructive bacterial disease of rosaceous plants, including apple and pear. Here, we compared the virulence levels of six E. amylovora strains (Ea273, CFBP1367, Ea581a, E2002a, E4001a, and HKN06P1) on apple trees and seedlings. The strains produced a range of disease severity, with HKN06P1 producing the greatest disease severity in every assay. We then compared virulence characteristic expression among the six strains, including growth rates in immature apple fruit, amylovoran production, levansucrase activity, biofilm formation, carbohydrate utilization, hypersensitive cell death elicitation in tobacco leaves, and protein secretion profiles. Multiple regression analysis indicated that three of the virulence characteristics (amylovoran production, biofilm formation, and growth in immature apple fruit) accounted for >70% of the variation in disease severity on apple seedlings. Furthermore, in greenhouse-grown 'Gala' trees, >75% of the variation in disease severity was accounted for by five of the virulence characteristics: amylovoran production, biofilm formation, growth in immature apple fruit, hypersensitive cell death elicitation, and sorbitol utilization. This study demonstrates that virulence factor expression levels account for differences in disease severity caused by wild isolates of E. amylovora on apple trees.


Assuntos
Erwinia amylovora/patogenicidade , Interações Hospedeiro-Patógeno , Malus/microbiologia , Proteínas de Bactérias/metabolismo , Metabolismo dos Carboidratos , Morte Celular , Erwinia amylovora/fisiologia , Frutas/microbiologia , Hexosiltransferases/metabolismo , Doenças das Plantas/microbiologia , Folhas de Planta/microbiologia , Plasmídeos , Polissacarídeos Bacterianos/metabolismo , Análise de Regressão , Plântula/microbiologia , Nicotiana/microbiologia , Virulência
13.
Phytopathology ; 100(4): 345-55, 2010 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-20205538

RESUMO

Sooty blotch and flyspeck (SBFS) fungi on apple fruit were sampled from nine orchards in four midwestern U.S. states during 2000 and 30 orchards in 10 eastern U.S. states during 2005 in order to estimate taxonomic diversity and discern patterns of geographic distribution. Forty apple fruit per orchard were arbitrarily sampled and colonies of each mycelial phenotype were counted on each apple. Representative colonies were isolated, cultures were purified, and DNA was extracted. For representative isolates, the internal transcribed spacer (ITS) and large subunit (LSU) regions of ribosomal DNA were amplified and sequenced. In total, 60 SBFS putative species were identified based on ITS sequences and morphological characteristics; 30 of these were discovered in the 2005 survey. Modified Koch's postulates were fulfilled for all 60 species in an Iowa orchard; colonies resulting from inoculation of apple fruit were matched to the original isolates on the basis of mycelial type and ITS sequence. Parsimony analysis for LSU sequences from both surveys revealed that 58 putative SBFS species were members of the Dothideomycetes, 52 were members of the Capnodiales, and 36 were members of the Mycosphaerellaceae. The number of SBFS species per orchard varied from 2 to 15. Number of SBFS species and values of the Margalef and Shannon indexes were significantly (P < 0.05) lower in 21 orchards that had received conventional fungicide sprays during the fruit maturation period than in 14 unsprayed orchards. Several SBFS species, including Schizothyrium pomi, Peltaster fructicola, and Pseudocercosporella sp. RH1, were nearly ubiquitous, whereas other species, such as Stomiopeltis sp. RS5.2, Phialophora sessilis, and Geastrumia polystigmatis, were found only within restricted geographic regions. The results document that the SBFS complex is far more taxonomically diverse than previously recognized and provide strong evidence that SBFS species differ in geographic distribution. To achieve more efficient management of SBFS, it may be necessary to understand the environmental biology of key SBFS species in each geographic region.


Assuntos
Fungos/genética , Malus/microbiologia , Doenças das Plantas/microbiologia , Frutas/microbiologia , Filogenia , Estados Unidos
14.
Ther Innov Regul Sci ; 54(6): 1416-1427, 2020 11.
Artigo em Inglês | MEDLINE | ID: mdl-32500449

RESUMO

BACKGROUND: Missing data are uncollected data but meaningful for the statistical analysis due to clinical relevancy of the data for properly specified estimands in clinical trials. Meanwhile the efforts to prevent or minimize missing data are commonly applied in clinical trials, in practice, missing data still occurs. Choosing a statistical method for imputation that deals with missing data targeting specified estimands provides the more reliable estimates of treatment effects. METHODS: We considered longitudinal clinical settings that have different degrees of missing data and treatment effects, and simulated different missing mechanisms using data from randomized, double-blind, placebo-controlled phase 3 confirmatory clinical trials of approved drugs. We compared four commonly used statistical methods to deal with missing data in clinical trials. RESULTS: We find that, when the data are missing not at random (MNAR) with higher missing rates, mixed model for repeated measurements (MMRM) method overestimates treatment difference. Pattern-mixture model estimates were seen to be more conservative in our studies than MMRM given MNAR assumptions, which are more realistic with missing data in clinical trials. CONCLUSIONS: We emphasize the importance of prevention of missing data and specifying the estimand based on trial objectives beforehand. The specified proper estimand and the proper statistical method might be key features to value the clinical trial results despite missing data.


Assuntos
Dor Crônica , Dor Crônica/tratamento farmacológico , Ensaios Clínicos Fase III como Assunto , Interpretação Estatística de Dados , Método Duplo-Cego , Humanos , Lipídeos , Estudos Longitudinais , Ensaios Clínicos Controlados Aleatórios como Assunto
15.
Plant Dis ; 93(11): 1195-1201, 2009 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-30754587

RESUMO

The impact of cluster compactness and debris retention on harvest bunch rot of Vitis interspecific hybrid 'Vignoles' was investigated between 2001 and 2005 near Lake Erie, in Pennsylvania. Cluster compactness was characterized subjectively based on the OIV code 204 standard and objectively by determining the number of berries per centimeter of rachis. In 2001, 2002, and 2004, the median number of berries per centimeter for loose clusters was 6.3, 7.0, and 6.4 compared with 10.2, 12.7, and 12.4 for the compact clusters, respectively. Kolmogorov-Smirnoff and the Mann-Whitney U two-samples tests confirmed that the distribution of the berries per centimeter was significantly (90 ≤ χ2 ≤ 184.3; P < 0.0001) different between the two subjective compactness categories. Cluster compactness was strongly correlated with bunch rot incidence (χ2 = 73.1 and 62.2 for 2001 and 2002, respectively; P < 0.0001), whereby disease incidence was higher in compact than in loose clusters. Logistic regression analysis indicated that every additional berry per centimeter unit of compactness almost doubled the likelihood of a cluster becoming infected with bunch rot (odds ratio = 1.828, 95% confidence interval [CI] = 1.392 to 2.399 in 2001 and odds ratio = 1.705, 95% CI = 1.394 to 2.085 in 2002). In 2004, bunch rot severity in compact clusters was nearly four times that of loose clusters. Linear regression analysis revealed that berries per centimeter accounted for >89% of the variation in bunch rot severity (R2 = 0.893, P < 0.0001, n = 30) and >74% in cluster weight (R2 = 0.745, P < 0.0001, n = 30). Accumulations of dehiscent floral debris contributed to greater bunch rot severity, and the effect was more pronounced in compact clusters than in loose clusters. Removal of basal leaves at trace bloom reduced berries per centimeter by 13% in 2004 and >25% in 2005, with corresponding reductions in bunch rot severity of 60% in 2004 and 62.5 to 82% in 2005. These results indicate that berries per centimeter is a good indicator of cluster compactness in Vignoles, and that practices that reduce cluster tightness would be effective in an integrated program for control of bunch rot on this cultivar.

16.
J Med Microbiol ; 57(Pt 4): 500-507, 2008 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-18349372

RESUMO

Cysteine proteinases from Porphyromonas gingivalis, or gingipains, are considered to be key virulence factors of the bacterium in relation to periodontal diseases. Incubation of human oral epithelial cells with lysine-specific gingipain (Kgp) and high-molecular-mass arginine-specific gingipain (HRgpA) resulted in a decrease in the production of interleukin (IL)-8, but not in the production of other pro-inflammatory cytokines. In contrast, arginine-specific gingipain 2 (RgpB) increased IL-8 production. RNA interference assays demonstrated that Kgp- and HRgpA-mediated downregulation and RgpB-mediated upregulation occurred through protease-activated receptor (PAR)-1 and PAR-2 signalling. Although the RgpB-mediated upregulation of IL-8 production occurred through nuclear factor-kappa B (NF-kappaB), the Kgp- and HRgpA-mediated downregulation was not negated in NF-kappaB-silenced cells. Both the haemagglutinin and the enzymic domains are required for Kgp and HRgpA to downregulate the production of IL-8 in human oral epithelial cells, and the two domains are thought to co-exist. These results suggest that gingipains preferentially suppress IL-8, resulting in attenuation of the cellular recognition of bacteria, and as a consequence, sustain chronic inflammation.


Assuntos
Adesinas Bacterianas/fisiologia , Cisteína Endopeptidases/fisiologia , Células Epiteliais/imunologia , Regulação da Expressão Gênica , Interleucina-8/biossíntese , Mucosa Bucal/imunologia , Porphyromonas gingivalis/enzimologia , Adesinas Bacterianas/metabolismo , Adesinas Bacterianas/farmacologia , Linhagem Celular Tumoral , Cisteína Endopeptidases/metabolismo , Cisteína Endopeptidases/farmacologia , Regulação para Baixo , Células Epiteliais/microbiologia , Cisteína Endopeptidases Gingipaínas , Humanos , Mucosa Bucal/citologia , Porphyromonas gingivalis/imunologia , Porphyromonas gingivalis/metabolismo , Regulação para Cima
17.
Curr Protein Pept Sci ; 4(6): 443-50, 2003 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-14683429

RESUMO

Gingipains are trypsin-like cysteine proteinases produced by Porphyromonas gingivalis, a major causative bacterium of adult periodontitis. Rgps (HRgpA and RgpB) and Kgp are specific for -Arg-Xaa- and -Lys-Xaa- peptide bonds, respectively. HRgpA and Kgp are non-covalent complexes containing separate catalytic and adhesion/hemagglutinin domains, while RgpB has only a catalytic domain with a primary structure essentially identical to that of the cata-lytic subunit of HRgpA. The multiple virulence activities of gingipains are reviewed in view of the biphasic mechanisms: activation and inactivation of host proteins. Rgps enhanced vascular permeability through prekallikrein activation or direct bradykinin release in combination with Kgp. This Rgp action is potentially associated with gingival edema and crevicular fluid production. Rgps activate the blood coagulation system, leading to progression of inflammation and consequent alveolar bone loss in the periodontitis site. Rgps also activate protease-activated receptors and induce platelet aggregation, which, together with the coagulation-inducing activity, may explain an emerging link between periodontitis and cardiovascular disease. Kgp is the most potent fibrinogen/fibrin degrading enzyme of the three gingipains in human plasma, being involved in the bleeding tendency at the diseased gingiva. Gingipains stimulate expression of matrix metalloproteinases (MMPs) in fibroblasts and activate secreted latent MMPs that can destroy periodontal tissues. Gingipains degrade cytokines, components of the complement system and several receptors, including macrophage CD14, T cell CD4 and CD8, thus perturbing the host-defense systems and thereby facilitating sustained colonization of P. gingivalis. Gingipains are potent virulence factors of P. gingivalis, and in many regards their pathogenic activities constitute new mechanisms of bacterial virulence.


Assuntos
Proteínas Sanguíneas/metabolismo , Tecido Conjuntivo/metabolismo , Cisteína Endopeptidases/metabolismo , Hemaglutininas/metabolismo , Proteínas de Membrana/metabolismo , Porphyromonas gingivalis/enzimologia , Porphyromonas gingivalis/patogenicidade , Adesinas Bacterianas , Cisteína Endopeptidases/química , Cisteína Endopeptidases Gingipaínas , Hemaglutininas/química , Humanos , Virulência
18.
Curr Protein Pept Sci ; 4(6): 397-407, 2003 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-14683426

RESUMO

Gingipains, extracellular cysteine proteinases of Porphyromonas gingivalis, constitute the major virulence factor of this periodontopathogenic bacterium. They are the product of three genes, two coding for an Arg-specific (RgpA and RgpB) and one for a Lys-specific proteinase (Kgp). Proteinase domains of RgpA and RgpB are virtually identical; however, the gene encoding the former enzyme is missing a large segment coding for hemaglutinin / adhesin (HA) domains. The latter domains are present also in Kgp. The tertiary structure of RgpB revealed that the proteinase domain of gingipains has a protein fold referred to as the caspase-hemoglobinase fold. On this basis, they are also evolutionary related to other highly specific proteinases including clostripain, caspases, legumains and separase (clan CD of cysteine peptidases). Gingipains are produced as large preproproteins and are subject to elaborate, not yet fully understood, secretion, glycosylation, activation, and maturation processes. How they traverse the outer membrane is unknown, although it can be hypothesized that they use an autotransporter pathway. Apparently during transport through the periplasm the LPS-like glycan moiety is added at the conserved C-terminal portion of progingipains. At the cell surface pro-gingipains fold into partially active, single-chain zymogens and undergo autocatalytic, intermolecular processing. Two sequential cleavages within the profragment domain enhance zymogen activity and in the case of RgpA and Kgp are followed by excision of the individual HA domains. These domains are further truncated at the C-terminus by concerted action of Kgp and carboxypeptidase and form a non-covalent multidomain, multifunctional complex anchored into the outer membrane by the glycated, C-terminal HA domain. This hypothetical scenario is a reasonable explanation for the occurrence of many forms of gingipains.


Assuntos
Cisteína Endopeptidases/química , Cisteína Endopeptidases/metabolismo , Hemaglutininas/química , Hemaglutininas/metabolismo , Porphyromonas gingivalis/enzimologia , Porphyromonas gingivalis/patogenicidade , Fatores de Virulência/química , Fatores de Virulência/metabolismo , Adesinas Bacterianas , Cisteína Endopeptidases/genética , Ativação Enzimática , Cisteína Endopeptidases Gingipaínas , Hemaglutininas/genética , Porphyromonas gingivalis/genética , Conformação Proteica , Processamento de Proteína Pós-Traducional , Fatores de Virulência/genética
19.
J Med Chem ; 47(8): 1889-92, 2004 Apr 08.
Artigo em Inglês | MEDLINE | ID: mdl-15055989

RESUMO

Aza-peptide Michael acceptors are a new class of irreversible inhibitors that are highly potent and specific for clan CD cysteine proteases. The aza-Asp derivatives were specific for caspases, while aza-Asn derivatives were effective legumain inhibitors. Aza-Lys and aza-Orn derivatives were potent inhibitors of gingipain K and clostripain. Aza-peptide Michael acceptors showed no cross reactivity toward papain, cathepsin B, and calpain.


Assuntos
Compostos Aza/síntese química , Inibidores de Caspase , Inibidores de Cisteína Proteinase/síntese química , Peptídeos/síntese química , Adesinas Bacterianas , Compostos Aza/química , Caspases/química , Cisteína Endopeptidases/química , Inibidores de Cisteína Proteinase/química , Cisteína Endopeptidases Gingipaínas , Hemaglutininas/química , Cinética , Peptídeos/química
20.
Medicine (Baltimore) ; 91(6): 287-308, 2012 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-23117850

RESUMO

Appreciation of the frequency of the congenitally malformed aortic valve has come about during the last 50 years, a period during which aortic valve replacement became a predictably successful operation. Study of patients at necropsy with either a congenitally unicuspid (1 true commissure) or bicuspid (2 true commissures) valve in whom no aortic valve operation has been performed has not been conducted during these 50 years, to our knowledge. We studied 218 patients at necropsy with congenitally malformed aortic valves: 28 (13%) had a unicuspid valve and 190 (87%), a bicuspid valve. Their ages at death ranged from 21 to 89 years (mean, 55 yr), and 80% were men. Of the 218 adults, the aortic valve functioned normally during life in 54 (25%) and abnormally in 164 (75%): aortic stenosis in 142 (65%), pure aortic regurgitation without superimposed infective endocarditis (IE) in 2 (1%), and IE superimposed on a previously normally functioning aortic valve in 20 (9%). IE occurred in a total of 31 (14%) of the 218 patients: involving a previously normally functioning valve in 20 (65%) and a previously stenotic valve in 11 (35%). Of the 218 patients, at least 141 (65%) died as a consequence of aortic valve disease (124 patients) or ascending aortic tears with or without dissection (17 patients). An estimated 1% of the population, maybe higher in men, has a congenitally malformed aortic valve. Data from this study suggest that about 75% of them will develop a major complication. Conversely, and encouragingly, about 25% will go through life without a complication.


Assuntos
Valva Aórtica/anormalidades , Adulto , Idoso , Idoso de 80 Anos ou mais , Valva Aórtica/patologia , Valva Aórtica/cirurgia , Doença da Válvula Aórtica Bicúspide , Causas de Morte , Endocardite/etiologia , Feminino , Cardiopatias Congênitas/complicações , Doenças das Valvas Cardíacas/complicações , Humanos , Masculino , Pessoa de Meia-Idade , História Natural , Adulto Jovem
SELEÇÃO DE REFERÊNCIAS
DETALHE DA PESQUISA