Detalhe da pesquisa
1.
SQANTI3: curation of long-read transcriptomes for accurate identification of known and novel isoforms.
Nat Methods
; 21(5): 793-797, 2024 May.
Artigo
em Inglês
| MEDLINE | ID: mdl-38509328
2.
Long read isoform sequencing reveals hidden transcriptional complexity between cattle subspecies.
BMC Genomics
; 24(1): 108, 2023 Mar 13.
Artigo
em Inglês
| MEDLINE | ID: mdl-36915055
3.
Systematic Profiling of Full-Length Ig and TCR Repertoire Diversity in Rhesus Macaque through Long Read Transcriptome Sequencing.
J Immunol
; 204(12): 3434-3444, 2020 06 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-32376650
4.
A comparative transcriptional landscape of maize and sorghum obtained by single-molecule sequencing.
Genome Res
; 28(6): 921-932, 2018 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-29712755
5.
Transcriptional fates of human-specific segmental duplications in brain.
Genome Res
; 28(10): 1566-1576, 2018 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-30228200
6.
Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line.
Genome Res
; 28(8): 1126-1135, 2018 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-29954844
7.
5'UTR-mediated regulation of Ataxin-1 expression.
Neurobiol Dis
; 134: 104564, 2020 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-31381977
8.
SpaRC: scalable sequence clustering using Apache Spark.
Bioinformatics
; 35(5): 760-768, 2019 03 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-30816928
9.
Normalized long read RNA sequencing in chicken reveals transcriptome complexity similar to human.
BMC Genomics
; 18(1): 323, 2017 04 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-28438136
10.
Characterization of fusion genes and the significantly expressed fusion isoforms in breast cancer by hybrid sequencing.
Nucleic Acids Res
; 43(18): e116, 2015 Oct 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-26040699
11.
Monoallelically expressed noncoding RNAs form nucleolar territories on NOR-containing chromosomes and regulate rRNA expression.
Elife
; 132024 Jan 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-38240312
12.
Structure and Alternative Splicing of the Antisense FMR1 (ASFMR1) Gene.
Mol Neurobiol
; 60(4): 2051-2061, 2023 Apr.
Artigo
em Inglês
| MEDLINE | ID: mdl-36598648
13.
Transformation of alignment files improves performance of variant callers for long-read RNA sequencing data.
Genome Biol
; 24(1): 91, 2023 04 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-37095564
14.
RNA-seq data science: From raw data to effective interpretation.
Front Genet
; 14: 997383, 2023.
Artigo
em Inglês
| MEDLINE | ID: mdl-36999049
15.
SQANTI3: curation of long-read transcriptomes for accurate identification of known and novel isoforms.
bioRxiv
; 2023 Jun 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-37398077
16.
Alternative splicing and genetic variation of mhc-e: implications for rhesus cytomegalovirus-based vaccines.
Commun Biol
; 5(1): 1387, 2022 12 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-36536032
17.
Long-read isoform sequencing reveals tissue-specific isoform expression between active and hibernating brown bears (Ursus arctos).
G3 (Bethesda)
; 12(3)2022 03 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-35100340
18.
Generating lineage-resolved, complete metagenome-assembled genomes from complex microbial communities.
Nat Biotechnol
; 40(5): 711-719, 2022 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-34980911
19.
An anchored chromosome-scale genome assembly of spinach improves annotation and reveals extensive gene rearrangements in euasterids.
Plant Genome
; 14(2): e20101, 2021 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-34109759
20.
Full-length transcript sequencing of human and mouse cerebral cortex identifies widespread isoform diversity and alternative splicing.
Cell Rep
; 37(7): 110022, 2021 11 16.
Artigo
em Inglês
| MEDLINE | ID: mdl-34788620