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1.
J Mol Recognit ; 36(6): e3012, 2023 06.
Artigo em Inglês | MEDLINE | ID: mdl-36987702

RESUMO

Vinculin is an integral component of integrin adhesions, where it functions as a molecular clutch coupling intracellular contraction to the extracellular matrix. Quantitating its contribution to the reinforcement of newly forming adhesions, however, requires ultrasensitive cell force assays covering short time and low force ranges. Here, we have combined atomic force microscopy-based single-cell force spectroscopy (SCFS) and optical tweezers force spectroscopy to investigate the role of vinculin in reinforcement of individual nascent adhesions during the first 5 min of cell contact with fibronectin or vitronectin. At minimal adhesion times (5-10 s), mouse embryonic fibroblast (MEF) wildtype (wt) and vinculin knock-out (vin(-/-) ) cells develop comparable adhesion forces on the scale of several individual integrin-ligand bonds, confirming that vinculin is dispensable for adhesion initiation. In contrast, after 60 to 120 s, adhesion strength and traction reinforce quickly in wt cells, while remaining low in vin(-/-) cells. Re-expression of full-length vinculin or a constitutively active vinculin mutant (vinT12) in MEF vin(-/-) cells restored adhesion and traction with the same efficiency, while vinculin with a mutated talin-binding head region (vinA50I) or missing the actin-binding tail-domain (vin880) was ineffective. Integrating total internal reflection fluorescence imaging into the SCFS setup furthermore enabled us to correlate vinculin-green fluorescent protein (GFP) recruitment to nascent adhesion sites with the built-up of vinculin-dependent adhesion forces directly. Vinculin recruitment and cell adhesion reinforcement followed synchronous biphasic patterns, suggesting vinculin recruitment, but not activation, as the rate-limiting step for adhesion reinforcement. Combining sensitive SCFS with fluorescence microscopy thus provides insight into the temporal sequence of vinculin-dependent mechanical reinforcement in nascent integrin adhesions.


Assuntos
Fibroblastos , Adesões Focais , Animais , Camundongos , Adesão Celular/fisiologia , Fibroblastos/metabolismo , Adesões Focais/metabolismo , Integrinas/metabolismo , Talina/genética , Talina/química , Talina/metabolismo , Vinculina/genética , Vinculina/química , Vinculina/metabolismo
2.
Int J Mol Sci ; 21(14)2020 Jul 20.
Artigo em Inglês | MEDLINE | ID: mdl-32698519

RESUMO

Mutations of the Pkhd1 gene cause autosomal recessive polycystic kidney disease (ARPKD). Pkhd1 encodes fibrocystin/polyductin (FPC), a ciliary type I membrane protein of largely unknown function, suggested to affect adhesion signaling of cells. Contributions of epithelial cell adhesion and contractility to the disease process are elusive. Here, we link loss of FPC to defective epithelial morphogenesis in 3D cell culture and altered cell contact formation. We study Pkhd1-silenced Madin-Darby Canine Kidney II (MDCKII) cells using an epithelial morphogenesis assay based on micropatterned glass coverslips. The assay allows analysis of cell adhesion, polarity and lumen formation of epithelial spheroids. Pkhd1 silencing critically affects the initial phase of the morphogenesis assay, leading to a reduction of correctly polarized spheroids by two thirds. Defects are characterized by altered cell adhesion and centrosome positioning of FPC-deficient cells in their 1-/2-cell stages. When myosin II inhibitor is applied to reduce cellular tension during the critical early phase of the assay, Pkhd1 silencing no longer inhibits formation of correctly polarized epithelia. We propose that altered sensing and cell interaction of FPC-deficient epithelial cells promote progressive epithelial defects in ARPKD.


Assuntos
Células Epiteliais/citologia , Receptores de Superfície Celular/genética , Animais , Adesão Celular , Cães , Células Epiteliais/metabolismo , Humanos , Células Madin Darby de Rim Canino , Rim Policístico Autossômico Recessivo/genética , Interferência de RNA
3.
Nephrol Dial Transplant ; 31(7): 1088-99, 2016 07.
Artigo em Inglês | MEDLINE | ID: mdl-26681731

RESUMO

BACKGROUND: In chronic kidney disease (CKD), serum concentrations of fibroblast growth factor 23 (FGF23) increase progressively as glomerular filtration rate declines, while renal expression of the FGF23 coreceptor Klotho decreases. Elevated circulating FGF23 levels are strongly associated with mortality and with left ventricular hypertrophy (LVH), which is a major cause of cardiovascular death in CKD patients. The cardiac FGF23/FGF receptor (FGFR) system and its role in the development of LVH in humans have not been addressed previously. METHODS: We conducted a retrospective case-control study in 24 deceased patients with childhood-onset end-stage renal disease (dialysis: n = 17; transplanted: n = 7), and 24 age- and sex-matched control subjects. Myocardial autopsy samples of the left ventricle were evaluated for expression of endogenous FGF23, FGFR isoforms, Klotho, calcineurin and nuclear factor of activated T-cells (NFAT) by immunohistochemistry, immunofluorescence microscopy, qRT-PCR and western blotting. RESULTS: The majority of patients presented with LVH (67%). Human cardiomyocytes express full-length FGF23, and cardiac FGF23 is excessively high in patients with CKD. Enhanced myocardial expression of FGF23 in concert with Klotho deficiency strongly correlates with the presence of LVH. Cardiac FGF23 levels associate with time-averaged serum phosphate levels, up-regulation of FGFR4 and activation of the calcineurin-NFAT signaling pathway, an established mediator of cardiac remodelling and LVH. These changes are detected in patients on dialysis but not in those with a functioning kidney transplant. CONCLUSIONS: Our results indicate a strong association between LVH and enhanced expression levels of FGF23, FGFR4 and calcineurin, activation of NFAT and reduced levels of soluble Klotho in the myocardium of patients with CKD. These alterations are not observed in kidney transplant patients.


Assuntos
Biomarcadores/metabolismo , Fatores de Crescimento de Fibroblastos/metabolismo , Hipertrofia Ventricular Esquerda/etiologia , Receptor Tipo 4 de Fator de Crescimento de Fibroblastos/metabolismo , Insuficiência Renal Crônica/complicações , Estudos de Casos e Controles , Criança , Feminino , Fator de Crescimento de Fibroblastos 23 , Humanos , Hipertrofia Ventricular Esquerda/metabolismo , Hipertrofia Ventricular Esquerda/patologia , Masculino , Estudos Retrospectivos
4.
iScience ; 27(4): 109487, 2024 Apr 19.
Artigo em Inglês | MEDLINE | ID: mdl-38550996

RESUMO

Loss of PKHD1-gene function causes autosomal recessive polycystic kidney disease (ARPKD) characterized by bilateral severely enlarged kidneys and congenital liver fibrosis requiring kidney replacement therapy most frequently during childhood. Studies using renal tissue from ARPKD patients suggest cyst promotion by suppressed hippo activity and enhanced Src/STAT3-signaling. We address renal homeostasis in female Pkhd1-knockout mice, aged 3 to 9 months, and observe features in common with late-onset ARPKD. Pkhd1-knockout animals show significant increase in kidney and liver weight with preserved organ function. Kidney cyst formation of the S3 segment is accompanied by macrophage recruitment and fibrotic remodeling. Cystic epithelia display increased proliferation, high levels of nuclear YAP/TAZ, and enhanced apoptosis. Y705-phosphorylated STAT3 is strongly enhanced in nuclei of cyst-lining epithelia. In this Pkhd1-deficiency model, stressed cystic epithelia expose the altered signaling pattern and disease-related mechanisms deemed relevant to human ARPKD, and thus may allow identification of therapeutic targets of this disease.

5.
Glia ; 61(7): 1067-83, 2013 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-23595642

RESUMO

Astrocytes operate in close spatial relationship to other cells including neurons. Structural interaction is controlled by a dynamic interplay between actin-based cell motility and contact formation via cell-cell and cell-extracellular matrix adhesions. A central player in the control of cell adhesion is the cytoskeletal adaptor protein Vinculin. Incorporation of Vinculin affects mechanical properties and turnover of cell adhesion sites. To study the in vivo function of Vinculin in astrocytes, a mouse line with astrocyte specific and inducible deletion of vinculin was generated. Deletion of vinculin decreased the expression of the glial acidic fibrillary protein (GFAP) in Bergmann glial cells in the cerebellum. In addition, localization of GFAP to Bergmann glial endfeet was disturbed, indicating a role for vinculin in controlling its expression and localization. In contrast, vimentin expression, morphology, activation state and polarity of the targeted cells as well as the localization of the extracellular matrix protein laminin was not compromised. Furthermore, stab wound lesions were performed in the cerebellar cortex. In both wildtype and vinculin knockout mice GFAP expression was upregulated in Bergmann glial cells of the lesioned area with no differences observed between genotypes in expression and localization of GFAP. These results propose a selective requirement for vinculin in cellular events related to cell adhesion in vivo. As in vitro data suggested a major role for vinculin in the control of the cytoskeletal connection affecting mechanical stability and cell motility, our data add a note of caution to the extrapolation of in vitro data to in vivo function.


Assuntos
Cerebelo/citologia , Proteína Glial Fibrilar Ácida/metabolismo , Neuroglia/metabolismo , Vinculina/deficiência , Animais , Proteínas de Bactérias/genética , Lesões Encefálicas , Células Cultivadas , Antagonistas de Estrogênios/farmacologia , Receptor beta de Estrogênio/metabolismo , Regulação da Expressão Gênica/genética , Humanos , Proteínas Luminescentes/genética , Camundongos , Camundongos Knockout , Neuroglia/efeitos dos fármacos , Tamoxifeno/farmacologia
6.
BMC Cell Biol ; 14: 2, 2013 Jan 07.
Artigo em Inglês | MEDLINE | ID: mdl-23294665

RESUMO

BACKGROUND: Disease manifestations of Staphylococcus aureus are connected to the fibronectin (Fn)-binding capacity of these Gram-positive pathogens. Fn deposition on the surface of S. aureus allows engagement of α5ß1 integrins and triggers uptake by host cells. For several integrin- and actin-associated cytoplasmic proteins, including FAK, Src, N-WASP, tensin and cortactin, a functional role during bacterial invasion has been demonstrated. As reorganization of the actin cytoskeleton is critical for bacterial entry, we investigated whether vinculin, an essential protein linking integrins with the actin cytoskeleton, may contribute to the integrin-mediated internalization of S. aureus. RESULTS: Complementation of vinculin in vinculin -/- cells, vinculin overexpression, as well as shRNA-mediated vinculin knock-down in different eukaryotic cell types demonstrate, that vinculin does not have a functional role during the integrin-mediated uptake of S. aureus. CONCLUSIONS: Our results suggest that vinculin is insignificant for the integrin-mediated uptake of S. aureus despite the critical role of vinculin as a linker between integrins and F-actin.


Assuntos
Receptores de Vitronectina/metabolismo , Staphylococcus aureus/fisiologia , Vinculina/metabolismo , Citoesqueleto de Actina/microbiologia , Animais , Aderência Bacteriana/fisiologia , Linhagem Celular , Fibronectinas/metabolismo , Células HEK293 , Humanos , Camundongos , Interferência de RNA , RNA Interferente Pequeno/metabolismo , Receptores de Vitronectina/genética , Vinculina/antagonistas & inibidores , Vinculina/genética
7.
Biochem Biophys Res Commun ; 430(1): 7-13, 2013 Jan 04.
Artigo em Inglês | MEDLINE | ID: mdl-23159629

RESUMO

Metavinculin is a muscle-specific splice variant of the ubiquitously expressed cytoskeletal adaptor protein vinculin. Both proteins are thought to be co-expressed in all muscle types where they co-localize to microfilament-associated adhesion sites. It has been shown that a metavinculin-specific insertion of 68 amino acids alters the biochemical properties of the five-helix bundle in the tail domain. Here, we demonstrate that the metavinculin-specific helix H1' plays an important role for protein stability of the tail domain, since a point mutation in this helix, R975W, which is associated with the occurrence of dilated cardiomyopathy in man, further decreases thermal stability of the metavinculin tail domain. In striated muscle progenitor cells (myoblasts), both, metavinculin and the R975W mutant show significantly reduced, albeit distinctive residency and exchange rates in adhesion sites as compared to vinculin. In contrast to previous studies, we show that metavinculin is localized in a muscle fiber type-dependent fashion to the costameres of striated muscle, reflecting the individual metabolic and physiological status of a given muscle fiber. Metavinculin expression is highest in fast, glycolytic muscle fibers and virtually absent in M. diaphragmaticus, a skeletal muscle entirely lacking fast, glycolytic fibers. In summary, our data suggest that metavinculin enrichment in attachment sites of muscle cells leads to higher mechanical stability of adhesion complexes allowing for greater shear force resistance.


Assuntos
Fibras Musculares Esqueléticas/metabolismo , Proteínas Musculares/metabolismo , Vinculina/metabolismo , Sequência de Aminoácidos , Animais , Arginina/genética , Arginina/metabolismo , Cardiomiopatia Dilatada/genética , Cardiomiopatia Dilatada/metabolismo , Bovinos , Humanos , Masculino , Dados de Sequência Molecular , Proteínas Musculares/química , Proteínas Musculares/genética , Mutação Puntual , Estabilidade Proteica , Estrutura Secundária de Proteína , Estrutura Terciária de Proteína , Resistência ao Cisalhamento , Triptofano/genética , Triptofano/metabolismo , Vinculina/química , Vinculina/genética
8.
Orphanet J Rare Dis ; 17(1): 122, 2022 03 09.
Artigo em Inglês | MEDLINE | ID: mdl-35264234

RESUMO

BACKGROUND: In pediatric hereditary cystic kidney diseases, epithelial cell defects mostly result from rare, autosomal recessively inherited pathogenic variants in genes encoding proteins of the cilia-centrosome complex. Consequences of individual gene variants on epithelial function are often difficult to predict and can furthermore depend on the patient's genetic background. Here, we studied urine-derived renal tubular epithelial cells (URECs) from genetically determined, pediatric cohorts of different hereditary cystic kidney diseases, comprising autosomal recessive polycystic kidney disease, nephronophthisis (NPH) and the Bardet Biedl syndrome (BBS). UREC characteristics and behavior in epithelial function-related 3D cell culture were compared in order to identify gene and variant-specific properties and to determine aspects of epithelial (cell) dysfunction. RESULTS: UREC preparations from patients (19) and healthy controls (39) were studied in a qualitative and quantitative manner using primary cells cultured for up-to 21 days. In patients with biallelic pathogenic variants in PKHD1 or NPHP genes, we were able to receive satisfactory amounts of URECs of reproducible quality. In BBS patients, UREC yield was lower and more dependent on the individual genotype. In contrast, in UREC preparations derived from healthy controls, no predictable and satisfactory outcome could be established. Considering cell proliferation, tubular origin and epithelial properties in 2D/3D culture conditions, we observed distinct and reproducible epithelial properties of URECs. In particular, the cells from patients carrying PKHD1 variants were characterized by a high incidence of defective morphogenesis of monolayered spheroids-a property proposed to be suitable for corrective intervention. Furthermore, we explored different ways to generate reference cell lines for both-patients and healthy controls-in order to eliminate restrictions in cell number and availability of primary URECs. CONCLUSIONS: Ex vivo 3D cell culture of primary URECs represents a valuable, non-invasive source to evaluate epithelial cell function in kidney diseases and as such helps to elucidate the functional consequences of rare genetic disorders. In combination with genetically defined control cell lines to be generated in the future, the cultivation of primary URECs could become a relevant tool for testing personalized treatment of epithelial dysfunction in patients with hereditary cystic kidney disease.


Assuntos
Doenças Renais Císticas , Rim Policístico Autossômico Recessivo , Criança , Genótipo , Humanos , Rim/patologia , Doenças Renais Císticas/patologia , Rim Policístico Autossômico Recessivo/genética , Rim Policístico Autossômico Recessivo/patologia , Proteínas/genética
9.
Biophys J ; 101(7): 1772-80, 2011 Oct 05.
Artigo em Inglês | MEDLINE | ID: mdl-21961604

RESUMO

The cytoskeletal adaptor protein vinculin plays an important role in the control of cell adhesion and migration, linking the actin cytoskeleton to adhesion receptor complexes in cell adhesion sites. The conformation of the vinculin tail dimer, which is crucial for protein function, was analyzed using site-directed spin labeling in electron paramagnetic resonance spectroscopy. Interspin distances for a set of six singly and four doubly spin-labeled mutants of the tail domain of vinculin were determined and used as constraints for modeling of the vinculin tail dimer. A comparison of the results obtained by molecular dynamic simulations and a rotamer library approach reveals that the crystal structure of the vinculin tail monomer is essentially preserved in aqueous solution. The orientation of monomers within the dimer observed previously by x-ray crystallography agrees with the solution electron paramagnetic resonance data. Furthermore, the distance between positions 1033 is shown to increase by >3 nm upon interaction of the vinculin tail domain with F-actin.


Assuntos
Espectroscopia de Ressonância de Spin Eletrônica/métodos , Multimerização Proteica , Vinculina/química , Simulação de Dinâmica Molecular , Movimento , Mutagênese , Mutação , Estrutura Secundária de Proteína , Soluções , Marcadores de Spin , Vinculina/genética , Vinculina/metabolismo
10.
J Biol Chem ; 285(17): 13121-30, 2010 Apr 23.
Artigo em Inglês | MEDLINE | ID: mdl-20181946

RESUMO

The cytoskeletal protein vinculin contributes to the mechanical link of the contractile actomyosin cytoskeleton to the extracellular matrix (ECM) through integrin receptors. In addition, vinculin modulates the dynamics of cell adhesions and is associated with decreased cell motility on two-dimensional ECM substrates. The effect of vinculin on cell invasion through dense three-dimensional ECM gels is unknown. Here, we report how vinculin expression affects cell invasion into three-dimensional collagen matrices. Cell motility was investigated in vinculin knockout and vinculin expressing wild-type mouse embryonic fibroblasts. Vinculin knockout cells were 2-fold more motile on two-dimensional collagen-coated substrates compared with wild-type cells, but 3-fold less invasive in 2.4 mg/ml three-dimensional collagen matrices. Vinculin knockout cells were softer and remodeled their cytoskeleton more dynamically, which is consistent with their enhanced two-dimensional motility but does not explain their reduced three-dimensional invasiveness. Importantly, vinculin-expressing cells adhered more strongly to collagen and generated 3-fold higher traction forces compared with vinculin knockout cells. Moreover, vinculin-expressing cells were able to migrate into dense (5.8 mg/ml) three-dimensional collagen matrices that were impenetrable for vinculin knockout cells. These findings suggest that vinculin facilitates three-dimensional matrix invasion through up-regulation or enhanced transmission of traction forces that are needed to overcome the steric hindrance of ECMs.


Assuntos
Movimento Celular/fisiologia , Citoesqueleto/metabolismo , Embrião de Mamíferos/metabolismo , Matriz Extracelular/metabolismo , Fibroblastos/metabolismo , Vinculina/metabolismo , Animais , Adesão Celular/fisiologia , Células Cultivadas , Colágeno/metabolismo , Citoesqueleto/genética , Embrião de Mamíferos/citologia , Matriz Extracelular/genética , Fibroblastos/citologia , Camundongos , Camundongos Knockout , Vinculina/genética
11.
Trends Cell Biol ; 16(9): 453-60, 2006 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-16893648

RESUMO

Vinculin is a ubiquitously expressed actin-binding protein frequently used as a marker for both cell-cell and cell-extracellular matrix (focal adhesion) adherens-type junctions, but its function has remained elusive. Vinculin is made up of a globular head linked to a tail domain by a short proline-rich sequence, and an intramolecular interaction between the head and tail masks the numerous ligand-binding sites in the protein. Determination of the crystal structure of vinculin has shed new light on the way that these ligand-binding sites are regulated. The picture that emerges is one in which vinculin stabilizes focal adhesions and thereby suppresses cell migration, an effect that is relieved by transient changes in the local concentrations of inositol phospholipids. However, the finding that vinculin modulates the signalling pathways involved in apoptosis suggests that additional roles for vinculin remain to be discovered.


Assuntos
Vinculina/química , Vinculina/metabolismo , Animais , Apoptose , Sítios de Ligação , Adesão Celular , Linhagem Celular , Regulação da Expressão Gênica , Humanos , Camundongos , Modelos Moleculares , Relação Estrutura-Atividade
12.
J Cell Physiol ; 225(3): 905-14, 2010 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-20607801

RESUMO

Following antigen contact, maturation and migration of DCs into lymphatic tissues are crucial to the developing immune response or maintenance of tolerance. Lysophosphatidylcholine (LysoPC) is generated during apoptosis of cells and acts as a "find-and-eat-me" signal thought to prevent autoimmunity. Moreover, LysoPC can activate PKCδ and initiates a signaling cascade that leads to phosphorylation and inactivation of syndecan-4 (SDC4), a heparansulfate proteoglycan integrin co-receptor. In human monocyte-derived DCs, we recently demonstrated that SDC4 is upregulated during maturation thereby stimulating DC motility. Here, we investigate the effects of LysoPC on DC motility as well as on the involvement of PKCδ phosphorylation-dependent regulation of DC motility by SDC4 and PKCα. Employing a static adhesion assay and videomicroscopy, we show that LysoPC inhibits adhesion of DCs to fibronectin and motility of DCs by decreasing podosome formation. Moreover, DC podosome formation and motility, which both are regulated by SDC4 and subject to control by PKCδ-dependent phosphorylation of SDC4, were inhibited in LysoPC-matured DCs. Thus, these DC are defective in adhesion and migration. Based on our results, we hypothesize that LysoPC released during apoptosis might delay DC migration to lymphoid organs and thus prevent autoimmunity.


Assuntos
Adesão Celular , Movimento Celular , Células Dendríticas/metabolismo , Lisofosfatidilcolinas/metabolismo , Sindecana-4/metabolismo , Apoptose , Autoimunidade , Antígeno B7-2/metabolismo , Extensões da Superfície Celular/metabolismo , Células Cultivadas , Células Dendríticas/imunologia , Fibronectinas/metabolismo , Antígenos HLA-DR/metabolismo , Humanos , Peptídeos e Proteínas de Sinalização Intracelular/metabolismo , Proteínas de Membrana/metabolismo , Microscopia de Vídeo , Substrato Quinase C Rico em Alanina Miristoilada , Fosforilação , Proteína Quinase C-alfa/metabolismo , Proteína Quinase C-delta/metabolismo
13.
Front Genet ; 11: 248, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32292417

RESUMO

Three-dimensional culture systems that allow generation of monolayered epithelial cell spheroids are widely used to study epithelial function in vitro. Epithelial spheroid formation is applied to address cellular consequences of (mono)-genetic disorders, that is, ciliopathies, in toxicity testing, or to develop treatment options aimed to restore proper epithelial cell characteristics and function. With the potential of a high-throughput method, the main obstacle to efficient application of the spheroid formation assay so far is the laborious, time-consuming, and bias-prone analysis of spheroid images by individuals. Hundredths of multidimensional fluorescence images are blinded, rated by three persons, and subsequently, differences in ratings are compared and discussed. Here, we apply supervised learning and compare strategies based on machine learning versus deep learning. While deep learning approaches can directly process raw image data, machine learning requires transformed data of features extracted from fluorescence images. We verify the accuracy of both strategies on a validation data set, analyse an experimental data set, and observe that different strategies can be very accurate. Deep learning, however, is less sensitive to overfitting and experimental batch-to-batch variations, thus providing a rather powerful and easily adjustable classification tool.

14.
Stud Health Technol Inform ; 147: 212-21, 2009.
Artigo em Inglês | MEDLINE | ID: mdl-19593059

RESUMO

A high throughput framework for virtual screening (VS) applications has been designed which enables researchers in in-silico drug discovery to deploy large scale time-consuming virtual screening experiments on High Performance/Grid computing environments. Issues related to enabling virtual screening on grids have been addressed extensively in the past; in this paper we describe a new framework, which supports the rapid deployment of virtual screening services based on UNICORE-6 and Meta Scheduling Service (MSS). We demonstrate, how the deployment of complex virtual screening workflows is facilitated by this framework and we provide some first results of the virtual laboratory testbed established in the course of the EU project PHOSPHORUS. The flexibility of the new VS framework allows easy deployment and integration of new resources and applications, making the Grid more accessible to the users.


Assuntos
Laboratórios , Programas de Rastreamento , Interface Usuário-Computador , Humanos , Design de Software
15.
Biochem Biophys Res Commun ; 373(1): 69-73, 2008 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-18554503

RESUMO

The focal adhesion protein vinculin (1066 residues) plays an important role in cell adhesion and migration. The interaction between vinculin and lipid membranes is necessary to ensure these processes. There are three putative lipid-membrane interaction sites located at the vinculin tail domain two that form amphipathic alpha-helices (residues 935-978 and 1020-1040) and one that remains unstructured (residues 1052-1066) during crystallization. In this work, the structural and biochemical properties of the last 21 residues of the vinculin tail domain were investigated. Differential scanning calorimetry was performed in the presence of lipid vesicles consisting of dimyristoyl-L-alpha-phosphatidylcholine and dimyristoyl-L-alpha-phosphatidylglycerol at various molar ratios. The results demonstrate that this peptide inserts into lipid vesicle membranes. Examining the secondary structure of this peptide by molecular dynamics simulations and circular dichroism spectroscopy, we show that it adopts an antiparallel beta sheet backbone geometry that could ensure the association with lipid vesicles.


Assuntos
Dimiristoilfosfatidilcolina/análogos & derivados , Fosfatidilgliceróis/metabolismo , Lipossomas Unilamelares/metabolismo , Vinculina/metabolismo , Sequência de Aminoácidos , Varredura Diferencial de Calorimetria , Cristalização , Dimiristoilfosfatidilcolina/química , Dimiristoilfosfatidilcolina/metabolismo , Adesões Focais , Humanos , Fosfatidilgliceróis/química , Estrutura Secundária de Proteína , Estrutura Terciária de Proteína , Lipossomas Unilamelares/química , Vinculina/química
16.
Stud Health Technol Inform ; 138: 125-34, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-18560114

RESUMO

Malaria remains a global health concern, which kills over a million people each year. In this paper we present work extending the approach of the WISDOM initiative by focusing on the problems noticed during the first WISDOM challenge against malaria and test the newly established, high bandwidth optical Grid environment VIOLA for advanced bioinformatics applications using the UNICORE middleware service. In addition we present an approach to reduce the size of the compound database to improve the efficiency of the screening.


Assuntos
Biologia Computacional/organização & administração , Sistemas Computacionais , Malária , Computação em Informática Médica , Interface Usuário-Computador , Bases de Dados como Assunto , Alemanha , Humanos
17.
Mol Biol Cell ; 29(19): 2317-2325, 2018 09 15.
Artigo em Inglês | MEDLINE | ID: mdl-30044710

RESUMO

The skin's epidermis is a multilayered epithelial tissue and the first line of defense against mechanical stress. Its barrier function depends on an integrated assembly and reorganization of cell-matrix and cell-cell junctions in the basal layer and on different intercellular junctions in suprabasal layers. However, how mechanical stress is recognized and which adhesive and cytoskeletal components are involved are poorly understood. Here, we subjected keratinocytes to cyclic stress in the presence or absence of intercellular junctions. Both states not only recognized but also responded to strain by reorienting actin filaments perpendicular to the applied force. Using different keratinocyte mutant strains that altered the mechanical link of the actin cytoskeleton to either cell-matrix or cell-cell junctions, we show that not only focal adhesions but also adherens junctions function as mechanosensitive elements in response to cyclic strain. Loss of paxillin or talin impaired focal adhesion formation and only affected mechanosensitivity in the absence but not presence of intercellular junctions. Further analysis revealed the adherens junction protein α-catenin as a main mechanosensor, with greatest sensitivity conferred on binding to vinculin. Our data reveal a mechanosensitive transition from cell-matrix to cell-cell adhesions on formation of keratinocyte monolayers with vinculin and α-catenin as vital players.


Assuntos
Junções Aderentes/metabolismo , Diferenciação Celular , Células Epiteliais/citologia , Células Epiteliais/metabolismo , Adesões Focais/metabolismo , Actinas/metabolismo , Animais , Comunicação Celular , Mecanotransdução Celular , Camundongos , Paxilina/metabolismo , Ligação Proteica , Fibras de Estresse/metabolismo , Estresse Mecânico , Vinculina/metabolismo , alfa Catenina/metabolismo
18.
Sci Rep ; 7: 44113, 2017 03 09.
Artigo em Inglês | MEDLINE | ID: mdl-28276491

RESUMO

Sepsis is a life-threatening organ dysfunction caused by a dysregulated host response to an infection leading to systemic inflammation and endothelial barrier breakdown. The vascular-destabilizing factor Angiopoietin-2 (Angpt-2) has been implicated in these processes in humans. Here we screened in an unbiased approach FDA-approved compounds with respect to Angpt-2 suppression in endothelial cells (ECs) in vitro. We identified Flunarizine - a well-known anti-migraine calcium channel (CC) blocker - being able to diminish intracellular Angpt-2 protein in a time- and dose-dependent fashion thereby indirectly reducing the released protein. Moreover, Flunarizine protected ECs from TNFα-induced increase in Angpt-2 transcription and vascular barrier breakdown. Mechanistically, we could exclude canonical Tie2 signalling being responsible but found that three structurally distinct T-type - but not L-type - CC blockers can suppress Angpt-2. Most importantly, experimental increase in intracellular calcium abolished Flunarizine's effect. Flunarizine was also able to block the injurious increase of Angpt-2 in murine endotoxemia in vivo. This resulted in reduced pulmonary adhesion molecule expression (intercellular adhesion molecule-1) and tissue infiltration of inflammatory cells (Gr-1). Our finding could have therapeutic implications as side effects of Flunarizine are low and specific sepsis therapeutics that target the dysregulated host response are highly desirable.


Assuntos
Angiopoietina-2/biossíntese , Cálcio/metabolismo , Endotoxemia/tratamento farmacológico , Flunarizina/farmacologia , Células Endoteliais da Veia Umbilical Humana/metabolismo , Transcrição Gênica/efeitos dos fármacos , Animais , Endotoxemia/metabolismo , Endotoxemia/patologia , Células Endoteliais da Veia Umbilical Humana/patologia , Humanos , Camundongos
19.
Sci Rep ; 7: 42780, 2017 02 16.
Artigo em Inglês | MEDLINE | ID: mdl-28202937

RESUMO

The focal adhesion kinase (FAK) regulates the dynamics of integrin-based cell adhesions important for motility. FAK's activity regulation is involved in stress-sensing and focal-adhesion turnover. The effect of FAK on 3D migration and cellular mechanics is unclear. We analyzed FAK knock-out mouse embryonic fibroblasts and cells expressing a kinase-dead FAK mutant, R454-FAK, in comparison to FAK wild-type cells. FAK knock-out and FAKR454/R454 cells invade dense 3D matrices less efficiently. These results are supported by FAK knock-down in wild-type fibroblasts and MDA-MB-231 human breast cancer cells showing reduced invasiveness. Pharmacological interventions indicate that in 3D matrices, cells deficient in FAK or kinase-activity behave similarly to wild-type cells treated with inhibitors of Src-activity or actomyosin-contractility. Using magnetic tweezers experiments, FAKR454/R454 cells are shown to be softer and exhibit impaired adhesion to fibronectin and collagen, which is consistent with their reduced 3D invasiveness. In line with this, FAKR454/R454 cells cannot contract the matrix in contrast to FAK wild-type cells. Finally, our findings demonstrate that active FAK facilitates 3D matrix invasion through increased cellular stiffness and transmission of actomyosin-dependent contractile force in dense 3D extracellular matrices.


Assuntos
Actomiosina/metabolismo , Movimento Celular , Matriz Extracelular/metabolismo , Fibroblastos/metabolismo , Proteína-Tirosina Quinases de Adesão Focal/metabolismo , Animais , Adesão Celular , Linhagem Celular , Linhagem Celular Tumoral , Células Cultivadas , Colágeno/farmacologia , Matriz Extracelular/química , Fibroblastos/efeitos dos fármacos , Fibroblastos/fisiologia , Fibronectinas/farmacologia , Proteína-Tirosina Quinases de Adesão Focal/genética , Humanos , Camundongos , Camundongos Endogâmicos C57BL
20.
Nat Commun ; 8(1): 1250, 2017 11 01.
Artigo em Inglês | MEDLINE | ID: mdl-29093447

RESUMO

Generation of a barrier in multi-layered epithelia like the epidermis requires restricted positioning of functional tight junctions (TJ) to the most suprabasal viable layer. This positioning necessitates tissue-level polarization of junctions and the cytoskeleton through unknown mechanisms. Using quantitative whole-mount imaging, genetic ablation, and traction force microscopy and atomic force microscopy, we find that ubiquitously localized E-cadherin coordinates tissue polarization of tension-bearing adherens junction (AJ) and F-actin organization to allow formation of an apical TJ network only in the uppermost viable layer. Molecularly, E-cadherin localizes and tunes EGFR activity and junctional tension to inhibit premature TJ complex formation in lower layers while promoting increased tension and TJ stability in the granular layer 2. In conclusion, our data identify an E-cadherin-dependent mechanical circuit that integrates adhesion, contractile forces and biochemical signaling to drive the polarized organization of junctional tension necessary to build an in vivo epithelial barrier.


Assuntos
Junções Aderentes/metabolismo , Caderinas/metabolismo , Epiderme/metabolismo , Receptores ErbB/metabolismo , Mecanotransdução Celular , Junções Íntimas/metabolismo , Citoesqueleto de Actina/metabolismo , Actinas/metabolismo , Junções Aderentes/ultraestrutura , Animais , Diferenciação Celular , Proliferação de Células , Epiderme/ultraestrutura , Camundongos , Camundongos Knockout , Microscopia de Força Atômica , Transdução de Sinais , Junções Íntimas/ultraestrutura
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