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1.
J Proteome Res ; 23(8): 3542-3551, 2024 Aug 02.
Artigo em Inglês | MEDLINE | ID: mdl-38973097

RESUMO

Trypsin digestion plays a pivotal role in successful bottom-up peptide characterization and quantitation. While denaturants are often incorporated to enhance protein solubility, surfactants are recognized to inhibit enzyme activity. However, several reports have suggested that incorporating surfactants or other solvent additives may enhance digestion and MS detection. Here, we assess the impacts of ionic surfactants on cumulative trypsin activity and subsequently evaluate the total digestion efficiency of a proteome mixture by quantitative MS. Although low surfactant concentrations, such as 0.01% SDS or 0.2% SDC, significantly enhanced the initial trypsin activity (by 14 or 42%, respectively), time course assays revealed accelerated enzyme deactivation, evident by 10- or 40-fold reductions in trypsin activity half-life at these respective surfactant concentrations. Despite enhanced initial tryptic activity, quantitative MS analysis of a common liver proteome extract, digested with various surfactants (0.01 or 0.1% SDS, 0.5% SDC), consistently revealed decreased peptide counts and signal intensity, indicative of a lower digestion efficiency compared to a nonsurfactant control. Furthermore, including detergents for digestion did not improve the detection of membrane proteins, nor hydrophobic peptides. These results stress the importance of assessing cumulative enzyme activity when optimizing the digestion of a proteome mixture, particularly in the presence of denaturants.


Assuntos
Proteoma , Proteômica , Tensoativos , Tripsina , Tripsina/metabolismo , Tripsina/química , Tensoativos/farmacologia , Tensoativos/química , Proteoma/análise , Proteômica/métodos , Animais , Dodecilsulfato de Sódio/farmacologia , Dodecilsulfato de Sódio/química , Fígado/metabolismo , Fígado/enzimologia , Fígado/efeitos dos fármacos
2.
J Proteome Res ; 23(9): 3877-3889, 2024 Sep 06.
Artigo em Inglês | MEDLINE | ID: mdl-39161190

RESUMO

The goal of proteomics experiments is to identify proteins to observe changes in cellular processes and diseases. One challenge in proteomics is the removal of contaminants following protein extraction, which can limit protein identifications. Single-pot, solid-phase-enhanced sample preparation (SP3) is a cleanup technique in which proteins are captured on carboxylate-modified particles through a proposed hydrophilic-interaction-liquid-chromatography (HILIC)-like mechanism. Recent results have suggested that proteins are captured in SP3 due to a protein-aggregation mechanism. Solvent precipitation, single-pot, solid-phase-enhanced sample preparation (SP4) is a newer cleanup technique that employs protein aggregation to capture proteins without modified particles. We hypothesize that differences in capture mechanisms of SP3 and SP4 affect which proteins are identified by each cleanup technique. Herein, we assess the proteins identified and enriched using SP3 versus SP4 for MCF7 subcellular fractions and correlate protein capture in each method to protein hydrophobicity. Our results indicate that SP3 captures more hydrophilic proteins through a combination of HILIC-like and protein-aggregation mechanisms, while SP4 captures more hydrophobic proteins through a protein-aggregation mechanism. Ultimately, we demonstrate that protein-capture mechanisms are distinct, and the selection of a cleanup technique that yields high proteome coverage is dependent on protein-sample hydrophobicity. Data has been deposited into MassIVE (MSV000094130) and ProteomeXchange (PXD049965).


Assuntos
Interações Hidrofóbicas e Hidrofílicas , Proteômica , Proteômica/métodos , Humanos , Cromatografia Líquida/métodos , Células MCF-7 , Proteínas/química , Proteínas/isolamento & purificação , Proteínas/análise , Proteínas/metabolismo , Agregados Proteicos
3.
AAPS PharmSciTech ; 24(8): 224, 2023 Nov 10.
Artigo em Inglês | MEDLINE | ID: mdl-37946092

RESUMO

Subcutaneous injections of phosphatidylcholine (PC), sodium deoxycholate (NADC), and a mixture of them were found to be an effective option for treating cellulite. However, it is noteworthy that the injection of NADC may result in inflammation as well as necrosis in the injection area. The preparation of a sustained release formulation based on lipid-liquid crystal that controls the release of NADC could be a potential solution to address the issue of inflammation and necrosis at the site of injection. To present a practical and validated approach for accurately determining the concentration of NADC in LLC formulations, spectrofluorimetry was used based on the International Council for Harmonization (ICH) Q2 guidelines. Based on the validation results, the fluorometric technique has been confirmed as a reliable, efficient, and economical analytical method for quantifying NADC concentrations. The method demonstrated favorable attributes of linearity, precision, and accuracy, with an r2 value of 0.999. Furthermore, it exhibited excellent interday and intraday repeatability, with RSD values below 4%. The recovery percentages ranged from 97 to 100%, indicating the method's ability to accurately measure NADC concentrations. The subcutaneous injection of the LLC-NADC demonstrated a reduction in inflammation and tissue necrosis in skin tissue, along with an increase in fat lysis within 30 days, when compared to the administration of only NADC solution. Moreover, the histopathological assessment confirmed that the use of the LLC formulation did not result in any detrimental side effects for kidney or heart tissue.


Assuntos
Cristais Líquidos , Humanos , Preparações de Ação Retardada , Cristais Líquidos/química , Ácido Desoxicólico/química , Lipídeos , Inflamação , Necrose
4.
Microbiology (Reading) ; 168(8)2022 08.
Artigo em Inglês | MEDLINE | ID: mdl-35960647

RESUMO

Resistance to antimicrobials is normally caused by mutations in the drug targets or genes involved in antimicrobial activation or expulsion. Here we show that an Escherichia coli strain, named DOC14, selected for increased resistance to the bile salt sodium deoxycholate, has no mutations in any ORF, but instead has a 2.1 Mb chromosomal inversion. The breakpoints of the inversion are two inverted copies of an IS5 element. Besides lowering deoxycholate susceptibility, the IS5-mediated chromosomal inversion in the DOC14 mutant was found to increase bacterial survival upon exposure to ampicillin and vancomycin, and sensitize the cell to ciprofloxacin and meropenem, but does not affect bacterial growth or cell morphology in a rich medium in the absence of antibacterial molecules. Overall, our findings support the notion that a large chromosomal inversion can benefit bacterial cells under certain conditions, contributing to genetic variability available for selection during evolution. The DOC14 mutant paired with its isogenic parental strain form a useful model as bacterial ancestors in evolution experiments to study how a large chromosomal inversion influences the evolutionary trajectory in response to various environmental stressors.


Assuntos
Infecções por Escherichia coli , Escherichia coli , Antibacterianos/farmacologia , Inversão Cromossômica , Ácido Desoxicólico/farmacologia , Farmacorresistência Bacteriana , Infecções por Escherichia coli/microbiologia , Humanos , Testes de Sensibilidade Microbiana
5.
Cells Tissues Organs ; 211(4): 385-394, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-33040059

RESUMO

There are few existing methods for shortening the decellularization period for a human-sized whole-liver scaffold. Here, we describe a protocol that enables effective decellularization of the liver obtained from pigs weigh 120 ± 4.2 kg within 72 h. Porcine livers (approx. 1.5 kg) were decellularized for 3 days using a combination of chemical and enzymatic decellularization agents. After trypsin, sodium deoxycholate, and Triton X-100 perfusion, the porcine livers were completely translucent. Our protocol was efficient to promote cell removal, the preservation of extracellular matrix (ECM) components, and vascular tree integrity. In conclusion, our protocol is efficient to promote human-sized whole-liver scaffold decellularization and thus useful to generate bioengineered livers to overcome the shortage of organs.


Assuntos
Engenharia Tecidual , Alicerces Teciduais , Animais , Matriz Extracelular , Humanos , Fígado , Perfusão , Suínos , Engenharia Tecidual/métodos
6.
J Fluoresc ; 32(4): 1557-1563, 2022 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-35553318

RESUMO

The present work describes the synthesis and characterization of pyrene derivatives, N-(1-Pyrenoylmethyl) pyridinium bromide (PM-PB) and N-(1-Pyrenoylmethyl)-N,N,N-triethylammonium bromide (PM-TAB). The photophysical behavior of these molecules has been studied in various protic and aprotic solvents. Using steady state fluorescence intensity, fluorescence anisotropy and dynamic fluorescence lifetime studies, the sensitivity of these molecules towards the micellization process of bile salts has been monitored. These derivatives have been effectively used in estimating critical micellar concentration (CMC) of bile salt, sodium deoxycholate (NaDC).


Assuntos
Ácidos e Sais Biliares , Sais , Brometos , Ácido Desoxicólico , Micelas
7.
Pharm Dev Technol ; 26(10): 1051-1060, 2021 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-34511044

RESUMO

Pueraria flavone (PF), the main component of Pueraria lobata, is a traditional Chinese medicine used for the treatment of cardiovascular and cerebrovascular diseases; however, it exhibits low oral bioavailability because of its poor membrane permeability. In this study, PF-loaded sodium deoxycholate-decorated liposomes (SDC-Lips) were prepared using the reverse-phase evaporation method and optimised using the Box-Behnken design method. The morphology, particle size, zeta potential, and entrapment efficiency of these PF-loaded SDC-Lips were evaluated. The release behaviours of PF-loaded SDC-Lips in simulated gastric and intestinal fluids were consistent with the Weibull kinetic model. In situ intestinal perfusion studies showed that the absorption characteristics of free PF in rats were mainly passive diffusion and partly active transport, and the duodenum was the main absorption site. After encapsulated with SDC-Lips, the absorption of PF increased significantly. The in vivo pharmacokinetic parameters of area under the plasma concentration-time curve (AUC)(0 → 12 h) and AUC(0 → ∞) of PF-loaded SDC-Lips after intragastric administration were 1.34-fold and 1.543-fold, respectively. Overall, the PF-loaded SDC-Lips improved the oral absorption of PF by increasing its solubility and might be considered a promising formulation strategy for prolonging the biological activity time of PF.


Assuntos
Flavonas , Pueraria , Administração Oral , Animais , Ácidos e Sais Biliares , Sistemas de Liberação de Medicamentos , Absorção Intestinal , Lipossomos , Ratos , Ratos Wistar
8.
Pharm Dev Technol ; 26(2): 157-166, 2021 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-33183103

RESUMO

Oral delivery of peptide and proteins is challenging due to their poor physical and chemical stability which usually results in inadequate therapeutic efficacy. Nanoparticles encapsulating insulin was developed by the ionic gelation technique using sulfobutyl ether-ß-cyclodextrin as an anionic linker. Phospholipid hybrid nanoparticles were formulated by utilizing ionic gelation and thin-film hydration methods using D-α-Tocopheryl polyethylene glycol 1000 succinate, sodium deoxycholate separately and in combination to take the advantage of liposomes and nanoparticles also various absorption enhancement mechanisms. All formulations were characterized and tested for in vitro gastrointestinal stability, in vitro drug release, and cytotoxicity. On the other hand, in vivo effects of developed formulations on reducing blood glucose levels were monitored for 8 hours. Phospholipid hybrid nanoparticles including D-α-Tocopheryl polyethylene glycol 1000 succinate and sodium deoxycholate in combination with 548.7 nm particle size, 0.332 polydispersity index, 22.0 mV zeta potential, and 61.9% encapsulation efficiency, exhibited desired gastrointestinal stability and insulin release in vitro. In addition, the formulation proved its safety with cytotoxicity studies on L929 cells. The subjected phospholipid hybrid nanoparticle formulation was found to be the most effective formulation by reducing and maintaining blood glucose levels with avoiding fluctuations.


Assuntos
Sistemas de Liberação de Medicamentos , Insulina/administração & dosagem , Nanopartículas , Fosfolipídeos/química , Administração Oral , Animais , Glicemia/efeitos dos fármacos , Ácido Desoxicólico/química , Diabetes Mellitus Experimental/tratamento farmacológico , Portadores de Fármacos/química , Liberação Controlada de Fármacos , Hipoglicemiantes/administração & dosagem , Hipoglicemiantes/efeitos adversos , Hipoglicemiantes/farmacologia , Insulina/efeitos adversos , Insulina/farmacologia , Lipossomos , Masculino , Tamanho da Partícula , Ratos , Ratos Wistar , Vitamina E/química
9.
Bull Exp Biol Med ; 171(5): 611-614, 2021 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-34617174

RESUMO

We studied the effect of various detergents (Tween-20, Triton X-100, and sodium deoxycholate) on activity and magnesium-dependent properties of Na+,K+-ATPase of the crude membrane fraction of rat cerebral cortex. All studied detergents significantly increased activity of the studied enzyme in a concentration-dependent manner. Sodium deoxycholate provided significantly higher values Na+,K+-ATPase activity (by ≈50%) than Triton X-100 and Tween-20. In the presence of Triton X-100, a changed pattern of the dependence of enzyme activity on the concentration of magnesium ions in the incubation solution was noted. Separate measurement of activities of Na+,K+-ATPase isoforms made it possible to assume that changes in magnesium-dependent properties are due to the predominant effect of Triton X-100 on ouabain-sensitive α2- and α3-isoforms.


Assuntos
Córtex Cerebral/enzimologia , Detergentes/farmacologia , ATPase Trocadora de Sódio-Potássio/efeitos dos fármacos , Animais , Fracionamento Celular , Membrana Celular/química , Membrana Celular/efeitos dos fármacos , Membrana Celular/metabolismo , Córtex Cerebral/química , Córtex Cerebral/metabolismo , Isoenzimas/efeitos dos fármacos , Isoenzimas/metabolismo , Cinética , Magnésio/metabolismo , Magnésio/farmacologia , Masculino , Octoxinol/farmacologia , Ratos , Ratos Wistar , ATPase Trocadora de Sódio-Potássio/metabolismo , Extratos de Tecidos/química , Extratos de Tecidos/metabolismo
10.
BMC Microbiol ; 20(1): 5, 2020 01 06.
Artigo em Inglês | MEDLINE | ID: mdl-31906851

RESUMO

BACKGROUND: Antimicrobial combinations have been proven as a promising approach in the confrontation with multi-drug resistant bacterial pathogens. In the present study, we identify and characterize a synergistic interaction of broad-spectrum nitroreductase-activated prodrugs 5-nitrofurans, with a secondary bile salt, Sodium Deoxycholate (DOC) in growth inhibition and killing of enterobacteria. RESULTS: Using checkerboard assay, we show that combination of nitrofuran furazolidone (FZ) and DOC generates a profound synergistic effect on growth inhibition in several enterobacterial species including Escherichia coli, Salmonella enterica, Citrobacter gillenii and Klebsiella pneumoniae. The Fractional Inhibitory Concentration Index (FICI) for DOC-FZ synergy ranges from 0.125 to 0.35 that remains unchanged in an ampicillin-resistant E. coli strain containing a ß-lactamase-producing plasmid. Findings from the time-kill assay further highlight the synergy with respect to bacterial killing in E. coli and Salmonella. We further characterize the mechanism of synergy in E. coli K12, showing that disruption of the tolC or acrA genes that encode components of multidrug efflux pumps causes, respectively, a complete or partial loss, of the DOC-FZ synergy. This finding indicates the key role of TolC-associated efflux pumps in the DOC-FZ synergy. Overexpression of Nitric Oxide-detoxifying enzyme Hmp results in a three-fold increase in FICI for DOC-FZ interaction, suggesting a role of nitric oxide in the synergy. We further demonstrate that DOC-FZ synergy is largely independent of NfsA and NfsB, the two major activation enzymes of the nitrofuran prodrugs. CONCLUSIONS: This study is to our knowledge the first report of nitrofuran-deoxycholate synergy against Gram-negative bacteria, offering potential applications in antimicrobial therapeutics. The mechanism of DOC-FZ synergy involves FZ-mediated inhibition of TolC-associated efflux pumps that normally remove DOC from bacterial cells. One possible route contributing to that effect is via FZ-mediated nitric oxide production.


Assuntos
Ácido Desoxicólico/farmacologia , Farmacorresistência Bacteriana/efeitos dos fármacos , Enterobacteriaceae/crescimento & desenvolvimento , Furazolidona/farmacologia , Proteínas da Membrana Bacteriana Externa/genética , Citrobacter/efeitos dos fármacos , Citrobacter/crescimento & desenvolvimento , Sinergismo Farmacológico , Enterobacteriaceae/efeitos dos fármacos , Escherichia coli/efeitos dos fármacos , Escherichia coli/crescimento & desenvolvimento , Proteínas de Escherichia coli/genética , Regulação Bacteriana da Expressão Gênica/efeitos dos fármacos , Klebsiella pneumoniae/efeitos dos fármacos , Klebsiella pneumoniae/crescimento & desenvolvimento , Lipoproteínas/genética , Proteínas de Membrana Transportadoras/genética , Viabilidade Microbiana/efeitos dos fármacos , Pró-Fármacos/farmacologia , Salmonella enterica/efeitos dos fármacos , Salmonella enterica/crescimento & desenvolvimento
11.
Anal Bioanal Chem ; 412(8): 1879-1892, 2020 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-32030493

RESUMO

Red blood cells (RBC) are the most common cell type found in blood. They might serve as reservoir for biomarker research as they are anuclear and lack the ability to synthesize proteins. Not many biomarker assays, however, have been conducted on RBC because of their large dynamic range of proteins, high abundance of lipids, and hemoglobin interferences. Here, we developed a semiquantitative mass spectrometry-based assay that targeted 144 proteins and compared the efficiency of urea, sodium deoxycholate, acetonitrile, and HemoVoid™ in their extraction of the RBC proteome. Our results indicate that protein extraction with HemoVoid™ led to hemoglobin reduction and increased detection of low abundance proteins. Although hemoglobin interference after deoxycholate and urea extraction was high, there were adequate amounts of low abundance proteins for quantitation. Extraction with acetonitrile led to an overall decrease in protein abundances probably as a result of precipitation. Overall, the best compromise in sensitivity and sample processing time was achieved with the urea-trypsin digestion protocol. This provided the basis for large-scale evaluations of protein targets as potential blood-based biomarkers. As a proof of concept, we applied this assay to determine that alpha-synuclein, a prominent marker in Parkinson's disease, has an average concentration of approximately 40 µg mL-1 in RBC. This is important to know as the concentration of alpha-synuclein in plasma, typically in the picogram per milliliter range, might be partially derived from lysed RBC. Utilization of this assay will prove useful for future biomarker studies and provide a more complete analytical toolbox for the measurement of blood-derived proteins. Graphical abstract.


Assuntos
Proteínas Sanguíneas/isolamento & purificação , Eritrócitos/metabolismo , Espectrometria de Massas/métodos , Biomarcadores/sangue , Cromatografia Líquida/métodos , Congelamento , Ensaios de Triagem em Larga Escala , Humanos , alfa-Sinucleína/sangue
12.
J Fluoresc ; 29(5): 1161-1170, 2019 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-31485813

RESUMO

The noncovalent interaction of a number of cationic and anionic meso-substituted polymethine (carbocyanine) dyes with sodium deoxycholate (NaDC) as a biologically important surfactant was studied by spectral-fluorescent methods. The following dyes were studied: 3,3'-di(ß-hydroxyethyl)-9-methylthiacarbocyanine-iodide (K1), 3,3'-di(ß-hydroxyethyl)-5,5'-dimethoxy-9-ethylthiacarbocyanine iodide (K2), 3,3',9-trimethylthiacarbocyanine iodide (K3, Cyan 2), 3,3'-di(γ-sulfopropyl)-9-methylthiacarbocyanine-betaine (A1), and 3,3'-di(γ-sulfopropyl)-4,5,4',5'-dibenzo-9-ethylthiacarbocyanine-betaine (A2, DEC). Upon addition of increasing concentrations of NaDC, the absorption spectra of dyes K1-K3 in aqueous solutions exhibit changes due to the formation of dye aggregates and their subsequent decomposition into monomers. The formation of aggregates of K1-K3 leads to broadening of the absorption spectra and an appearance of additional bands. Upon binding to the surfactant, the cis-monomers of the dyes undergo partial cis-trans conversion, which is accompanied by an increase in the fluorescence intensity. The binding constants of the dyes to NaDC were estimated on the basis of Scatchard and Hill models from the dependences of the absorption and fluorescence spectra on the concentration of NaDC.

13.
Biomed Chromatogr ; 33(7): e4515, 2019 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-30811616

RESUMO

The extent of human intestinal absorption (HIA) for a drug is considered to be an important pharmacokinetic parameter which must be determined for orally administered drugs. Traditional experimental methods relied upon animal testing and are renowned for being time consuming and expensive as well as being ethically unfavourable. As a result, the development of alternative methods to evaluate a drug's pharmacokinetics is crucial. Micellar liquid chromatography is considered to be one of these methods that can replace the use of animals in the prediction of HIA. In this study, the combination of an aminopropyl column with the biosurfactant sodium deoxycholate bile salt was used in the experimental determination of micelle-water partition coefficients (log Pmw ) for a group of compounds. Multiple linear regression was then used for the prediction of HIA using the experimentally determined log Pmw along with other molecular descriptors, leading to the construction of a model equation of R2 = 85% and a prediction power represented by R2 Pred. = 72%. The use of micellar liquid chromatography with an aminopropyl column in combination with sodium deoxycholate was found to be a good method for the prediction of human intestinal absorption, providing data for a far wider range of compounds compared with previous studies.


Assuntos
Cromatografia Líquida/métodos , Absorção Intestinal/fisiologia , Modelos Biológicos , Ácido Desoxicólico/análise , Ácido Desoxicólico/química , Ácido Desoxicólico/metabolismo , Humanos , Modelos Lineares , Micelas , Reprodutibilidade dos Testes
14.
J Dairy Sci ; 102(4): 2954-2965, 2019 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-30799110

RESUMO

Escherichia coli O157:H7, Cronobacter spp., and Salmonella spp. are common food-borne pathogens in milk that may cause serious diseases. In the present study, we established a simple, rapid, and specific method to simultaneously detect viable E. coli O157:H7, Cronobacter spp., and Salmonella spp. in milk. Three specific genes, fliC from E. coli O157:H7, cgcA from Cronobacter spp., and invA from Salmonella spp., were selected and used to design primers and probes. False-positive results were eliminated with the use of a combined sodium deoxycholate (SD) and propidium monoazide (PMA) treatment. Using the optimized parameters, this SD-PMA treatment combined with multiplex real-time PCR (SD-PMA-mRT-PCR) detected E. coli O157:H7, Cronobacter spp. and Salmonella spp. respectively, at 102 cfu/mL in pure culture or artificially spiked skim milk samples. A reasonable recovery rate (from 100 to 107%) for detection of viable bacteria using the SD-PMA-mRT-PCR assay was obtained in the presence of dead bacteria at 107 cfu/mL. The SD-PMA-mRT-PCR method developed in this study can accurately detect and monitor combined contamination with E. coli O157:H7, Cronobacter spp., and Salmonella spp. in milk and milk products.


Assuntos
Cronobacter/isolamento & purificação , Escherichia coli O157/isolamento & purificação , Leite/microbiologia , Reação em Cadeia da Polimerase em Tempo Real/métodos , Salmonella/isolamento & purificação , Animais , Azidas , Ácido Desoxicólico , Microbiologia de Alimentos , Propídio/análogos & derivados , Sensibilidade e Especificidade
15.
J Proteome Res ; 17(8): 2668-2678, 2018 08 03.
Artigo em Inglês | MEDLINE | ID: mdl-29745666

RESUMO

Protein glycosylation is a common protein post-translational modification (PTM) in living organisms and has been shown to associate with multiple diseases, and thus may potentially be a biomarker of such diseases. Efficient protein/glycoprotein extraction is a crucial step in the preparation of N-glycans derived from glycoproteins prior to LC-MS analysis. Convenient, efficient and unbiased sample preparation protocols are needed. Herein, we evaluated the use of sodium deoxycholate (SDC) acidic labile detergent to release N-glycans of glycoproteins derived from biological samples such as cancer cell lines. Compared to the filter-aided sample preparation approach, the sodium deoxycholate (SDC) assisted approach was determined to be more efficient and unbiased. SDC removal was determined to be more efficient when using acidic precipitation rather than ethyl acetate phase transfer. Efficient extraction of proteins/glycoproteins from biological samples was achieved by combining SDC lysis buffer and beads beating cell disruption. This was suggested by a significant overall increase in the intensities of N-glycans released from cancer cell lines. Additionally, the use of SDC approach was also shown to be more reproducible than those methods that do not use SDC.


Assuntos
Ácido Desoxicólico/química , Polissacarídeos/análise , Proteômica/métodos , Espectrometria de Massas em Tandem/métodos , Animais , Linhagem Celular Tumoral , Precipitação Química , Cromatografia Líquida/métodos , Glicoproteínas/análise , Glicosilação , Humanos , Processamento de Proteína Pós-Traducional , Reprodutibilidade dos Testes , Manejo de Espécimes
16.
AAPS PharmSciTech ; 19(5): 2276-2287, 2018 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-29845503

RESUMO

Ondansetron hydrochloride (OND) is commonly used for management of postoperative and chemotherapeutic-induced nausea and vomiting. It suffers from low bioavailability (60%) and rapid elimination (t1/2; 3-4 h). The current work aimed to develop OND-loaded bilosomes as a promising transdermal delivery system capable of surmount drug limitations. The variables influencing the development of OND-loaded bilosomes and niosomes (18 systems) via the thin film hydration technique were investigated, including surfactant type (Span®60 or Span®80), surfactant/cholesterol molar ratio (7:0, 7:1, or 7:3), and sodium deoxycholate (SDC) concentration (0, 2.5, or 5%, w/v). The systems were characterized for particle size, polydispersity index, zeta potential, drug entrapment efficiency (EE%), and in vitro permeation. Based on factorial analysis (32·21) and calculations of desirability values, six systems were further subjected to ex vivo permeation through excised rat skin, differential scanning calorimetry (DSC), powder x-ray diffraction (PXRD), and transmission electron microscopy. Histopathological and in vivo permeation studies in rats were conducted on the best achieved system (B6) in comparison to drug solution. Higher desirability values were achieved with Span® 60-based bilosomes, surfactant/cholesterol molar ratio of 7:1, and SDC concentration of 2.5% w/v with respect to small vesicle size, polydispersity index and high zeta potential, EE%, and cumulative drug permeation. OND was dispersed in amorphous state as revealed from DSC and PXRD studies. No marked effect was observed in rat skin following application of B6 system while higher ex vivo and in vivo cumulative permeation profiles were revealed. Bilosomal systems were considered as safe and efficient carriers for the transdermal delivery for OND.


Assuntos
Antieméticos/administração & dosagem , Antieméticos/metabolismo , Sistemas de Liberação de Medicamentos/métodos , Ondansetron/administração & dosagem , Ondansetron/metabolismo , Absorção Cutânea/efeitos dos fármacos , Administração Cutânea , Animais , Animais Recém-Nascidos , Disponibilidade Biológica , Varredura Diferencial de Calorimetria , Lipossomos , Masculino , Microscopia Eletrônica de Transmissão , Tamanho da Partícula , Ratos , Pele/efeitos dos fármacos , Pele/metabolismo , Absorção Cutânea/fisiologia , Tensoativos/química , Difração de Raios X
17.
AAPS PharmSciTech ; 19(5): 2077-2086, 2018 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-29691753

RESUMO

We report nanomicelles of amphotericin B (AmB) using various molar ratios of AmB and sodium deoxycholate sulfate (SDCS) for inhalation with improved stability, solubility, bioactivity, and safety. The particle sizes of all aerosolized formulations are expressed as mass median aerodynamic diameter (0.9-1.6 µm), fine particle fraction (70.3-86.5%), and geometric standard deviation (1.4-2.1) which indicated their sizes are appropriate for use as an inhaler. In vitro cytotoxicity studies conducted using respiratory and kidney cell lines demonstrated that the marketed Fungizone® was toxic to macrophage and embryonic kidney cells and cell viability decreased from 96 to 48% and from 97 to 67%, respectively when the AmB equivalent concentration was increased from 1 to 16 µg/mL. However, AmB-SDCS formulations showed no evidence of toxicity even up to 8 µg/mL compared to Fungizone®. Minimum inhibitory and fungicidal concentrations were significantly reduced against Cryptococcus neoformans, and Candida albicans. Also, antileishmanial activity significantly improved for AmB-SDCS formulations. There was an evidence of phagocytosis of the AmB-SDCS formulation by alveolar macrophages NR 8383. Molecular modeling studies suggested the role of hydrogen bonding in stabilization of the AmB-SDCS complex. This study indicated that AmB-SDCS nanomicelles can be used to design a safe and cost-effective AmB for inhalation. Graphical abstract ᅟ.


Assuntos
Anfotericina B/administração & dosagem , Sobrevivência Celular/efeitos dos fármacos , Ácido Desoxicólico/administração & dosagem , Portadores de Fármacos/administração & dosagem , Nanopartículas/administração & dosagem , Sulfatos/administração & dosagem , Células A549 , Aerossóis , Amebicidas/administração & dosagem , Amebicidas/metabolismo , Anfotericina B/metabolismo , Animais , Antibacterianos/administração & dosagem , Antibacterianos/metabolismo , Antifúngicos/administração & dosagem , Antifúngicos/metabolismo , Candida albicans/efeitos dos fármacos , Candida albicans/fisiologia , Sobrevivência Celular/fisiologia , Ácido Desoxicólico/metabolismo , Portadores de Fármacos/metabolismo , Células HEK293 , Humanos , Lipídeos , Micelas , Testes de Sensibilidade Microbiana , Nanopartículas/metabolismo , Tamanho da Partícula , Solubilidade , Sulfatos/metabolismo
18.
Proteomics ; 17(6)2017 03.
Artigo em Inglês | MEDLINE | ID: mdl-27412720

RESUMO

In a comparative study, we investigated the influence of nine sample preparation workflows and seven different lysis buffers for qualitative and quantitative analysis of the human adipose tissue proteome. Adipose tissue is not just a fat depot but also an endocrine organ, which cross-talks with other tissue types and organs throughout the body, like liver, muscle, pancreas, and brain. Its secreted molecules have an influence on the nervous, immune, and vascular system, thus adipose tissue plays an important role in the regulation of whole-body homeostasis. Proteomic analysis of adipose tissue is challenging due to the extremely high lipid content and a variety of different cell types included. We investigated the influence of different detergents to the lysis buffer and compared commonly used methods like protein precipitation and filter-aided sample preparation (FASP) with workflows involving acid labile or precipitable surfactants. The results indicate that a sodium deoxycholate (SDC) based workflow had the highest efficiency and reproducibility for quantitative proteomic analysis. In total 2564 proteins from the adipose tissue of a single person were identified.


Assuntos
Análise Custo-Benefício , Interações Hidrofóbicas e Hidrofílicas , Proteômica/economia , Proteômica/métodos , Ácido Desoxicólico , Humanos , Peso Molecular , Peptídeos/metabolismo
19.
J Proteome Res ; 16(2): 1061-1068, 2017 02 03.
Artigo em Inglês | MEDLINE | ID: mdl-28067524

RESUMO

Comprehensive analysis of post-translational modifications (PTMs) often depends on the purification of modified peptides prior to LC-MS/MS. The implementation of these enrichment methods requires thorough knowledge of the experimental conditions to achieve optimal selectivity and sensitivity. In this regard, large-scale analysis of lysine acetylation, a key PTM for multiple cellular processes, makes use of monoclonal pan-antibodies designed against this moiety. We report that the immuno-purification of lysine-acetylated peptides is hampered by the copurification of lysine carbamylated peptides, a frequent urea artifact. This specific interaction can be explained by the similar chemical structures of lysine acetylation and lysine carbamylation. As an alternative, we propose a sample preparation protocol based on sodium deoxycholate that eliminates these artifacts and dramatically improves the selectivity and sensitivity of this immuno-purification assay.


Assuntos
Cromatografia de Fase Reversa/normas , Técnicas de Imunoadsorção/normas , Lisina/química , Processamento de Proteína Pós-Traducional , Proteoma/isolamento & purificação , Ureia/química , Acetilação , Anticorpos/química , Artefatos , Cromatografia Líquida , Ácido Desoxicólico/química , Células HEK293 , Humanos , Concentração de Íons de Hidrogênio , Proteoma/química , Espectrometria de Massas em Tandem
20.
Mol Pharm ; 14(4): 1095-1106, 2017 04 03.
Artigo em Inglês | MEDLINE | ID: mdl-28198632

RESUMO

Chagas disease (CD) is a parasitic zoonosis endemic in most mainland countries of Central and South America affecting nearly 10 million people, with 100 million people at high risk of contracting the disease. Treatment is only effective if received at the early stages of the disease. Only two drugs (benznidazole and nifurtimox) have so far been marketed, and both share various limitations such as variable efficacy, many side effects, and long duration of treatment, thus reducing compliance. The in vitro and in vivo efficacy of poly-aggregated amphotericin B (AmB), encapsulated poly-aggregated AmB in albumin microspheres (AmB-AME), and dimeric AmB-sodium deoxycholate micelles (AmB-NaDC) was evaluated. Dimeric AmB-NaDC exhibited a promising selectivity index (SI = 3164) against amastigotes, which was much higher than those obtained for licensed drugs (benznidazole and nifurtimox). AmB-AME, but not AmB-NaDC, significantly reduced the parasitemia levels (3.6-fold) in comparison to the control group after parenteral administration at day 7 postinfection. However, the oral administration of AmB-NaDC (10-15 mg/kg/day for 10 days) resulted in a 75% reduction of parasitemia levels and prolonged the survival rate in 100% of the tested animals. Thus, the results presented here illustrate for the first time the oral efficacy of AmB in the treatment of trypanosomiasis. AmB-NaDC is an easily scalable, affordable formulation prepared from GRAS excipients, enabling treatment access worldwide, and therefore it can be regarded as a promising therapy for trypanosomiasis.


Assuntos
Anfotericina B/química , Anfotericina B/farmacologia , Antifúngicos/química , Antifúngicos/farmacologia , Doença de Chagas/tratamento farmacológico , Ácido Desoxicólico/química , Ácido Desoxicólico/farmacologia , Trypanosoma cruzi/efeitos dos fármacos , Albuminas/química , Animais , Doença de Chagas/microbiologia , Química Farmacêutica/métodos , Combinação de Medicamentos , Excipientes/química , Feminino , Camundongos Endogâmicos BALB C , Micelas , Microesferas , Tamanho da Partícula
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