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1.
Int J Mol Sci ; 23(3)2022 Jan 18.
Artigo em Inglês | MEDLINE | ID: mdl-35162950

RESUMO

A2A adenosine receptors (A2A-AR) have a cardio-protective function upon ischemia and reperfusion, but on the other hand, their stimulation could lead to arrhythmias. Our aim was to investigate the potential use of the PET radiotracer [18F]FLUDA to non-invasively determine the A2A-AR availability for diagnosis of the A2AR status. Therefore, we compared mice with cardiomyocyte-specific overexpression of the human A2A-AR (A2A-AR TG) with the respective wild type (WT). We determined: (1) the functional impact of the selective A2AR ligand FLUDA on the contractile function of atrial mouse samples, (2) the binding parameters (Bmax and KD) of [18F]FLUDA on mouse and human atrial tissue samples by autoradiographic studies, and (3) investigated the in vivo uptake of the radiotracer by dynamic PET imaging in A2A-AR TG and WT. After A2A-AR stimulation by the A2A-AR agonist CGS 21680 in isolated atrial preparations, antagonistic effects of FLUDA were found in A2A-AR-TG animals but not in WT. Radiolabelled [18F]FLUDA exhibited a KD of 5.9 ± 1.6 nM and a Bmax of 455 ± 78 fmol/mg protein in cardiac samples of A2A-AR TG, whereas in WT, as well as in human atrial preparations, only low specific binding was found. Dynamic PET studies revealed a significantly higher initial uptake of [18F]FLUDA into the myocardium of A2A-AR TG compared to WT. The hA2A-AR-specific binding of [18F]FLUDA in vivo was verified by pre-administration of the highly affine A2AAR-specific antagonist istradefylline. Conclusion: [18F]FLUDA is a promising PET probe for the non-invasive assessment of the A2A-AR as a marker for pathologies linked to an increased A2A-AR density in the heart, as shown in patients with heart failure.


Assuntos
Coração/diagnóstico por imagem , Miocárdio/metabolismo , Tomografia por Emissão de Pósitrons/métodos , Receptor A2A de Adenosina/genética , Adenosina/análogos & derivados , Adenosina/farmacologia , Animais , Radioisótopos de Flúor/química , Coração/fisiologia , Humanos , Camundongos , Camundongos Transgênicos , Fenetilaminas/farmacologia , Purinas/farmacologia , Receptor A2A de Adenosina/metabolismo , Vidarabina/administração & dosagem , Vidarabina/análogos & derivados , Vidarabina/química
2.
Bioorg Med Chem Lett ; 52: 128405, 2021 11 15.
Artigo em Inglês | MEDLINE | ID: mdl-34624489

RESUMO

Vidarabine (ARA) was one of the earliest marine-related compounds to be used clinically for antiviral therapy, however, its fast metabolism is the main defect of this drug. To overcome this, we designed and synthesized a group of phosphamide-modified ARA compounds using ProTide technology. With a phosphamide modification, these compounds could become the substrate of specific phospholipase enzymes expressed in the liver. Among all 16 synthesized compounds, most showed stronger activity against herpes simplex virus type 1 (HSV-1) than ARA (EC50 of approximately 10 µM). The top three compounds were compound 2 (EC50 = 0.52 ± 0.04 µM), compound 6 (EC50 = 1.05 ± 0.09 µM) and compound 15 (EC50 = 1.18 ± 0.08 µM) (about 2 times higher than Sp type compound 2). This study provides evidence for use of the phosphamide modification, which could give ARA higher activity and liver cell targeting.


Assuntos
Antivirais/farmacologia , Dimetoato/farmacologia , Herpes Simples/tratamento farmacológico , Herpesvirus Humano 1/efeitos dos fármacos , Vidarabina/farmacologia , Antivirais/síntese química , Antivirais/química , Dimetoato/química , Relação Dose-Resposta a Droga , Humanos , Testes de Sensibilidade Microbiana , Estrutura Molecular , Relação Estrutura-Atividade , Vidarabina/síntese química , Vidarabina/química
3.
Molecules ; 26(20)2021 Oct 12.
Artigo em Inglês | MEDLINE | ID: mdl-34684735

RESUMO

In continuation of our previous effort, different in silico selection methods were applied to 310 naturally isolated metabolites that exhibited antiviral potentialities before. The applied selection methods aimed to pick the most relevant inhibitor of SARS-CoV-2 nsp10. At first, a structural similarity study against the co-crystallized ligand, S-Adenosyl Methionine (SAM), of SARS-CoV-2 nonstructural protein (nsp10) (PDB ID: 6W4H) was carried out. The similarity analysis culled 30 candidates. Secondly, a fingerprint study against SAM preferred compounds 44, 48, 85, 102, 105, 182, 220, 221, 282, 284, 285, 301, and 302. The docking studies picked 48, 182, 220, 221, and 284. While the ADMET analysis expected the likeness of the five candidates to be drugs, the toxicity study preferred compounds 48 and 182. Finally, a density-functional theory (DFT) study suggested vidarabine (182) to be the most relevant SARS-Cov-2 nsp10 inhibitor.


Assuntos
Antivirais/química , Produtos Biológicos/química , SARS-CoV-2/metabolismo , Proteínas Virais Reguladoras e Acessórias/antagonistas & inibidores , Antivirais/metabolismo , Antivirais/uso terapêutico , Sítios de Ligação , Produtos Biológicos/metabolismo , Produtos Biológicos/uso terapêutico , COVID-19/patologia , Teoria da Densidade Funcional , Humanos , Ligantes , Simulação de Acoplamento Molecular , S-Adenosilmetionina/química , S-Adenosilmetionina/metabolismo , SARS-CoV-2/isolamento & purificação , Bibliotecas de Moléculas Pequenas/química , Bibliotecas de Moléculas Pequenas/metabolismo , Bibliotecas de Moléculas Pequenas/uso terapêutico , Vidarabina/química , Vidarabina/metabolismo , Vidarabina/uso terapêutico , Proteínas Virais Reguladoras e Acessórias/metabolismo , Tratamento Farmacológico da COVID-19
4.
Molecules ; 25(5)2020 Mar 09.
Artigo em Inglês | MEDLINE | ID: mdl-32182773

RESUMO

The bi-enzymatic synthesis of the antiviral drug vidarabine (arabinosyladenine, ara-A), catalyzed by uridine phosphorylase from Clostridium perfringens (CpUP) and a purine nucleoside phosphorylase from Aeromonas hydrophila (AhPNP), was re-designed under continuous-flow conditions. Glyoxyl-agarose and EziGTM1 (Opal) were used as immobilization carriers for carrying out this preparative biotransformation. Upon setting-up reaction parameters (substrate concentration and molar ratio, temperature, pressure, residence time), 1 g of vidarabine was obtained in 55% isolated yield and >99% purity by simply running the flow reactor for 1 week and then collecting (by filtration) the nucleoside precipitated out of the exiting flow. Taking into account the substrate specificity of CpUP and AhPNP, the results obtained pave the way to the use of the CpUP/AhPNP-based bioreactor for the preparation of other purine nucleosides.


Assuntos
Antivirais/química , Enzimas Imobilizadas/química , Purina-Núcleosídeo Fosforilase/química , Vidarabina/química , Aeromonas hydrophila/enzimologia , Biocatálise , Reatores Biológicos , Biotransformação/efeitos dos fármacos , Clostridium perfringens/enzimologia , Enzimas Imobilizadas/genética , Glioxilatos/química , Humanos , Engenharia de Proteínas/métodos , Nucleosídeos de Purina/química , Nucleosídeos de Purina/metabolismo , Purina-Núcleosídeo Fosforilase/genética , Sefarose/química , Especificidade por Substrato , Vidarabina/biossíntese , Vidarabina/genética
5.
Biomacromolecules ; 20(3): 1429-1442, 2019 03 11.
Artigo em Inglês | MEDLINE | ID: mdl-30707833

RESUMO

Fludarabine is an anticancer antimetabolite essential for modern chemotherapy, but its efficacy is limited due to the complex pharmacokinetics. We demonstrated the potential use of maltose-modified poly(propyleneimine) dendrimer as drug delivery agent to improve the efficiency of therapy with fludarabine. In this study, we elaborated a novel synthesis technique for radioactively labeled fludarabine triphosphate to prove for the first time the direct ability of nucleotide-glycodendrimer complex to enter and kill leukemic cells, without the involvement of membrane nucleoside transporters and intracellular kinases. This will potentially allow to bypass the most common drug resistance mechanisms observed in the clinical setting. Further, we applied surface plasmon resonance and molecular modeling to elucidate the properties of the drug-dendrimer complexes. We showed that clofarabine, a more toxic nucleoside analogue drug, is characterized by significantly different molecular interactions with poly(propyleneimine) dendrimers than fludarabine, leading to different cellular outcomes (decreased rather than increased treatment efficiency). The most probable mechanistic explanation of uniquely dendrimer-enhanced fludarabine toxicity points to a crucial role of both an alternative cellular uptake pathway and the avoidance of intracellular phosphorylation of nucleoside drug form.


Assuntos
Antimetabólitos Antineoplásicos/química , Antineoplásicos/química , Clofarabina/química , Dendrímeros/química , Maltose/química , Polipropilenos/química , Vidarabina/análogos & derivados , Antimetabólitos Antineoplásicos/farmacocinética , Humanos , Ressonância de Plasmônio de Superfície , Células U937 , Vidarabina/química , Vidarabina/farmacocinética
6.
FASEB J ; 31(7): 3007-3017, 2017 07.
Artigo em Inglês | MEDLINE | ID: mdl-28373209

RESUMO

While working with G418-resistant stably transfected cells, we realized the neomycin resistance (NeoR) gene, which encodes the aminoglycoside-3'-phosphotransferase-IIa [APH(3')-IIa], also confers resistance to the nucleoside analog fludarabine. Fludarabine is a cytostatic drug widely used in the treatment of hematologic and solid tumors, as well as in the conditioning of patients before transplantation of hematopoietic progenitors. We present evidence that NeoR-transfected cells do not incorporate fludarabine, thus avoiding DNA damage caused by the drug, evidenced by a lack of FANCD2 monoubiquitination and impaired apoptosis. A screening of other nucleoside analogs revealed that APH(3')-IIa only protects against ATP purine analogs. Moreover, APH(3')-IIa ATPase activity is inhibited by fludarabine monophosphate, suggesting that APH(3')-IIa blocks fludarabine incorporation into DNA by dephosphorylating its active fludarabine triphosphate form. Furthermore, overexpression of the catalytic subunit of the eukaryotic kinase PKA, which is structurally related to APHs, also provides resistance to fludarabine, anticipating its putative utility as a response marker to the drug. Our results preclude the use of Neo marker plasmids in the study of purine analogs and unveils a new resistance mechanism against these chemotherapeuticals.-Sánchez-Carrera, D., Bravo-Navas, S., Cabezón, E., Arechaga, I., Cabezas, M., Yáñez, L., Pipaón, C. Fludarabine resistance mediated by aminoglycoside-3'-phosphotransferase-IIa and the structurally related eukaryotic cAMP-dependent protein kinase.


Assuntos
Antineoplásicos/farmacologia , Proteínas Quinases Dependentes de AMP Cíclico/metabolismo , Resistencia a Medicamentos Antineoplásicos/fisiologia , Regulação Enzimológica da Expressão Gênica/fisiologia , Canamicina Quinase/metabolismo , Vidarabina/análogos & derivados , Sítios de Ligação , Linhagem Celular Transformada , Clonagem Molecular , Proteínas Quinases Dependentes de AMP Cíclico/genética , Fibroblastos , Humanos , Canamicina Quinase/genética , Estrutura Molecular , Relação Estrutura-Atividade , Vidarabina/química , Vidarabina/farmacologia
7.
J Cell Biochem ; 117(5): 1126-35, 2016 May.
Artigo em Inglês | MEDLINE | ID: mdl-26477689

RESUMO

The combination of the gene of purine nucleoside phosphorylase (PNP) from Escherichia coli and fludarabine represents one of the most promising systems in the gene therapy of solid tumors. The use of fludarabine in gene therapy is limited by the lack of an enzyme that is able to efficiently activate this prodrug which, consequently, has to be administered in high doses that cause serious side effects. In an attempt to identify enzymes with a better catalytic efficiency than E. coli PNP towards fludarabine to be used as a guidance on how to improve the activity of the bacterial enzyme, we have selected 5'-deoxy-5'-methylthioadenosine phosphorylase (SsMTAP) and 5'-deoxy-5'-methylthioadenosine phosphorylase II (SsMTAPII), two PNPs isolated from the hyperthermophilic archaeon Sulfolobus solfataricus. Substrate specificity and catalytic efficiency of SsMTAP and SsMTAPII for fludarabine were analyzed by kinetic studies and compared with E. coli PNP. SsMTAP and SsMTAPII share with E. coli PNP a comparable low affinity for the arabinonucleoside but are better catalysts of fludarabine cleavage with k(cat)/K(m) values that are 12.8-fold and 6-fold higher, respectively, than those reported for the bacterial enzyme. A computational analysis of the interactions of fludarabine in the active sites of E. coli PNP, SsMTAP, and SsMTAPII allowed to identify the crucial residues involved in the binding with this substrate, and provided structural information to improve the catalytic efficiency of E. coli PNP by enzyme redesign.


Assuntos
Proteínas Arqueais/metabolismo , Proteínas de Escherichia coli/metabolismo , Purina-Núcleosídeo Fosforilase/metabolismo , Sulfolobus solfataricus/enzimologia , Vidarabina/análogos & derivados , Adenosina/química , Adenosina/metabolismo , Arabinonucleosídeos/química , Arabinonucleosídeos/metabolismo , Proteínas Arqueais/química , Ligação Competitiva , Biocatálise , Domínio Catalítico , Cristalografia por Raios X , Proteínas de Escherichia coli/química , Isoenzimas/química , Isoenzimas/metabolismo , Cinética , Modelos Moleculares , Estrutura Molecular , Ligação Proteica , Domínios Proteicos , Purina-Núcleosídeo Fosforilase/química , Especificidade por Substrato , Vidarabina/química , Vidarabina/metabolismo
8.
J Proteome Res ; 10(3): 1030-42, 2011 Mar 04.
Artigo em Inglês | MEDLINE | ID: mdl-21182289

RESUMO

Cladribine (CdA) and fludarabine (FdAMP) are purine analogs that induce apoptosis in chronic lymphocytic leukemia and non-Hodgkin's lymphoma, but the mechanisms are undefined. The effects of CdA and fludarabine nucleoside (FdA) on the cytosolic, mitochondrial, and nuclear proteomes in human Raji lymphoma cells have been determined using two-dimensional fluorescence difference gel electrophoresis (DIGE) and mass spectrometry. Differentially abundant proteins have provided new insights into CdA- and FdA-induced apoptosis. Treatment with these purine analogs induced changes in proteins involved with intermediary metabolism, cell growth, signal transduction, protein metabolism, and regulation of nucleic acids. Differentially abundant mitochondrial 39S ribosomal protein L50, mTERF domain-containing protein 1, Chitinase-3 like 2 protein, and ubiquinone biosynthesis protein COQ9 have been identified in cells undergoing apoptosis. Up-regulation of several stress-associated proteins found in the endoplasmic reticulum (ER) including GRP78, ERp57, and ORP150 suggests that purine analog-induced apoptosis may result from ER stress and unfolded protein response. While mitochondria-dependent apoptosis has been associated with purine analog cytotoxicity, the likely involvement of the ER stress pathway in CdA- and FdA-induced apoptosis has been shown here for the first time.


Assuntos
Antineoplásicos/uso terapêutico , Cladribina/uso terapêutico , Linfoma de Células B/tratamento farmacológico , Proteoma/análise , Proteoma/efeitos dos fármacos , Purinas/farmacologia , Vidarabina/análogos & derivados , Antineoplásicos/química , Antineoplásicos/farmacologia , Apoptose/efeitos dos fármacos , Linhagem Celular Tumoral/efeitos dos fármacos , Linhagem Celular Tumoral/metabolismo , Cladribina/química , Cladribina/farmacologia , Eletroforese em Gel Bidimensional , Retículo Endoplasmático/metabolismo , Chaperona BiP do Retículo Endoplasmático , Humanos , Linfoma de Células B/metabolismo , Mitocôndrias/efeitos dos fármacos , Mitocôndrias/metabolismo , Chaperonas Moleculares/metabolismo , Purinas/química , Vidarabina/química , Vidarabina/farmacologia , Vidarabina/uso terapêutico
9.
Zhong Yao Cai ; 34(9): 1368-70, 2011 Sep.
Artigo em Zh | MEDLINE | ID: mdl-22260002

RESUMO

OBJECTIVE: To study the chemical constituents of Phryma leptostachya. METHODS: The chemical constituents were isolated and purified by silica gel column, recrystallization and Pre-RP-HPLC and their structwes were elucidated by spectroscopic methods. RESULTS: Five compounds were obtained and identified as ursolic acid (1), quercetin (2), isovanillic acid (3), p-hydroxybenzoic acid (4), adenine arabinoside (5). CONCLUSION: Compounds 2 - 5 are isolated from this genus for the first time.


Assuntos
Magnoliopsida/química , Parabenos/isolamento & purificação , Quercetina/isolamento & purificação , Ácido Vanílico/análogos & derivados , Cromatografia Líquida de Alta Pressão/métodos , Etanol/química , Estrutura Molecular , Parabenos/química , Plantas Medicinais/química , Quercetina/química , Ácido Vanílico/química , Ácido Vanílico/isolamento & purificação , Vidarabina/química , Vidarabina/isolamento & purificação
10.
Viruses ; 13(5)2021 04 27.
Artigo em Inglês | MEDLINE | ID: mdl-33925713

RESUMO

Viral infections are one of the leading causes in human mortality and disease. Broad-spectrum antiviral drugs are a powerful weapon against new and re-emerging viruses. However, viral resistance to existing broad-spectrum antivirals remains a challenge, which demands development of new broad-spectrum therapeutics. In this report, we showed that fludarabine, a fluorinated purine analogue, effectively inhibited infection of RNA viruses, including Zika virus, Severe fever with thrombocytopenia syndrome virus, and Enterovirus A71, with all IC50 values below 1 µM in Vero, BHK21, U251 MG, and HMC3 cells. We observed that fludarabine has shown cytotoxicity to these cells only at high doses indicating it could be safe for future clinical use if approved. In conclusion, this study suggests that fludarabine could be developed as a potential broad-spectrum anti-RNA virus therapeutic agent.


Assuntos
Antivirais/farmacologia , Enterovirus Humano A/efeitos dos fármacos , Phlebovirus/efeitos dos fármacos , Vidarabina/análogos & derivados , Zika virus/efeitos dos fármacos , Animais , Antivirais/química , Linhagem Celular , Sobrevivência Celular , Células Cultivadas , Humanos , Vírus de RNA/efeitos dos fármacos , Vidarabina/química , Vidarabina/farmacologia , Replicação Viral/efeitos dos fármacos
11.
Mar Drugs ; 8(10): 2619-38, 2010 Oct 11.
Artigo em Inglês | MEDLINE | ID: mdl-21116410

RESUMO

Marine sponges are currently one of the richest sources of pharmacologically active compounds found in the marine environment. These bioactive molecules are often secondary metabolites, whose main function is to enable and/or modulate cellular communication and defense. They are usually produced by functional enzyme clusters in sponges and/or their associated symbiotic microorganisms. Natural product lead compounds from sponges have often been found to be promising pharmaceutical agents. Several of them have successfully been approved as antiviral agents for clinical use or have been advanced to the late stages of clinical trials. Most of these drugs are used for the treatment of human immunodeficiency virus (HIV) and herpes simplex virus (HSV). The most important antiviral lead of marine origin reported thus far is nucleoside Ara-A (vidarabine) isolated from sponge Tethya crypta. It inhibits viral DNA polymerase and DNA synthesis of herpes, vaccinica and varicella zoster viruses. However due to the discovery of new types of viruses and emergence of drug resistant strains, it is necessary to develop new antiviral lead compounds continuously. Several sponge derived antiviral lead compounds which are hoped to be developed as future drugs are discussed in this review. Supply problems are usually the major bottleneck to the development of these compounds as drugs during clinical trials. However advances in the field of metagenomics and high throughput microbial cultivation has raised the possibility that these techniques could lead to the cost-effective large scale production of such compounds. Perspectives on biotechnological methods with respect to marine drug development are also discussed.


Assuntos
Antivirais/farmacologia , Infecções por HIV/tratamento farmacológico , Herpes Simples/tratamento farmacológico , Poríferos/metabolismo , Vidarabina/farmacologia , Animais , Antivirais/química , Antivirais/isolamento & purificação , Organismos Aquáticos , Biotecnologia/métodos , Descoberta de Drogas , Humanos , Metagenômica/métodos , Poríferos/crescimento & desenvolvimento , Poríferos/microbiologia , Simplexvirus/efeitos dos fármacos , Simbiose , Vidarabina/química , Vidarabina/isolamento & purificação
12.
Biomed Chromatogr ; 24(4): 374-86, 2010 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-19650151

RESUMO

A rapid and selective liquid chromatography/tandem mass spectrometric method was developed for the simultaneous determination of capecitabine and its metabolites 5'-deoxy-5-fluorocytidine (5'-DFCR), 5'-deoxy-5-fluorouracil (5'-DFUR), 5-fluorouracil (5-FU) and dihydro-5-fluorouracil (FUH(2)) in human plasma. A 200 microL human plasma aliquot was spiked with a mixture of internal standards fludarabine and 5-chlorouracil. A single-step protein precipitation method was employed using 10% (v/v) trichloroacetic acid in water to separate analytes from bio-matrices. Volumes of 20 microL of the supernatant were directly injected onto the HPLC system. Separation was achieved on a 30 x 2.1 mm Hypercarb (porous graphitic carbon) column using a gradient by mixing 10 mm ammonium acetate and acetonitrile-2-propanol-tetrahydrofuran (1 : 3 : 2.25, v/v/v). The detection was performed using a Finnigan TSQ Quantum Ultra equipped with the electrospray ion source operated in positive and negative mode. The assay quantifies a range from 10 to 1000 ng/mL for capecitabine, from 10 to 5000 ng/mL for 5'-DFCR and 5'-DFUR, and from 50 to 5000 ng/mL for 5-FU and FUH(2) using a plasma sample of 200 microL. Correlation coefficients (r(2)) of the calibration curves in human plasma were better than 0.99 for all compounds. At all concentration levels, deviations of measured concentrations from nominal concentration were between -4.41 and 3.65% with CV values less than 12.0% for capecitabine, between -7.00 and 6.59% with CV values less than 13.0 for 5'-DFUR, between -3.25 and 4.11% with CV values less than 9.34% for 5'-DFCR, between -5.54 and 5.91% with CV values less than 9.69% for 5-FU and between -4.26 and 6.86% with CV values less than 14.9% for FUH(2). The described method was successfully applied for the evaluation of the pharmacokinetic profile of capecitabine and its metabolites in plasma of treated cancer patients.


Assuntos
Antimetabólitos Antineoplásicos/sangue , Cromatografia Líquida de Alta Pressão/métodos , Desoxicitidina/análogos & derivados , Fluoruracila/análogos & derivados , Pirimidinas/sangue , Espectrometria de Massas em Tandem/métodos , 1-Propanol/química , Acetonitrilas/química , Antimetabólitos Antineoplásicos/química , Capecitabina , Precipitação Química , Desoxicitidina/sangue , Desoxicitidina/química , Estabilidade de Medicamentos , Floxuridina/sangue , Floxuridina/química , Fluoruracila/sangue , Fluoruracila/química , Furanos/química , Humanos , Modelos Lineares , Pirimidinas/química , Reprodutibilidade dos Testes , Espectrometria de Massas por Ionização por Electrospray , Ácido Tricloroacético/química , Uracila/análogos & derivados , Uracila/química , Vidarabina/análogos & derivados , Vidarabina/química
13.
J Pharm Biomed Anal ; 179: 112994, 2020 Feb 05.
Artigo em Inglês | MEDLINE | ID: mdl-31791837

RESUMO

Fludarabine is a purine derivative, anti-neoplastic drug and is still being used in the treatments of chronic lymphocytic leukemia, small lymphocytic lymphoma, acute myeloid leukemia, Non-Hodgkin's lymphoma. It achieves its function by interacting with DNA. Therefore, the binding interactions of such drugs with deoxyribonucleic acid (DNA) is an important subject for pharmaceutical and biochemical studies aiming at designing better DNA binding drugs. Although DNA binding mode of some of the anti-neoplastic drugs has been studied, DNA interaction of Fludarabine has not been explored yet. For this reason, this work has been dedicated to deciphering the experimental and theoretical investigation of Fludarabine binding mechanism via multispectroscopic techniques including UV absorption spectroscopy, thermal denaturation, fluorescence and FTIR spectroscopy, electrochemical and viscosity measurement methods as well as with molecular docking studies under physiological conditions. We observed in the lowest energy docking poses that Fludarabine binds to DNA via major groove binding mode. The nonplanar and extended structure and hydrogen bonding interactions of Fludarabine with the Adenine-Thymine base-pair played a very decisive role in the binding mode as supported by the experimental results.


Assuntos
Vidarabina/análogos & derivados , Sítios de Ligação , DNA , Ligação de Hidrogênio , Simulação de Acoplamento Molecular , Espectrometria de Fluorescência , Espectrofotometria Ultravioleta , Espectroscopia de Infravermelho com Transformada de Fourier , Vidarabina/química , Viscosidade
14.
Spectrochim Acta A Mol Biomol Spectrosc ; 233: 118170, 2020 Jun 05.
Artigo em Inglês | MEDLINE | ID: mdl-32143170

RESUMO

Fludarabine (Flu) is widely used to treat B-cell chronic lymphocytic leukemia. HSA is of the essence to human, especially in blood circulation system. The interaction mechanism between Flu and HSA was studied by comprehensive spectroscopic methods and molecular docking technique. UV-vis and FL spectrum results indicated that Flu bond with HSA, and there was a new complex produced at the binding site I in subdomain IIA. Association constants at 298 K were 1.637 × 104 M-1 and 1.552 × 104 M-1 at 310 K, respectively. The negative enthalpy (ΔH) and positive entropy (ΔS) values for the interaction revealed that the binding behavior was driven by hydrophobic forces and hydrogen bonds. The results obtained from UV, RLS spectra, 3D fluorescence and CD spectrum illustrated that Flu could change the secondary structure of HSA. According to molecule docking result, the binding energy of interaction is -11.15 kcal/mol.


Assuntos
Simulação de Acoplamento Molecular , Albumina Sérica Humana/química , Vidarabina/análogos & derivados , Humanos , Espectrometria de Fluorescência , Espectrofotometria Ultravioleta , Vidarabina/química
15.
ACS Chem Biol ; 14(9): 1904-1912, 2019 09 20.
Artigo em Inglês | MEDLINE | ID: mdl-31479243

RESUMO

Nucleoside analogues are widely used in clinical practice as chemotherapy drugs. Arabinose nucleoside derivatives such as fludarabine are effective in the treatment of patients with acute and chronic leukemias and non-Hodgkin's lymphomas. Although nucleoside analogues are generally known to function by inhibiting DNA synthesis in rapidly proliferating cells, the identity of their in vivo targets and mechanism of action are often not known in molecular detail. Here we provide a structural basis for arabinose nucleotide-mediated inhibition of human primase, the DNA-dependent RNA polymerase responsible for initiation of DNA synthesis in DNA replication. Our data suggest ways in which the chemical structure of fludarabine could be modified to improve its specificity and affinity toward primase, possibly leading to less toxic and more effective therapeutic agents.


Assuntos
Trifosfato de Adenosina/análogos & derivados , Antineoplásicos/química , Antivirais/química , DNA Primase/antagonistas & inibidores , Vidarabina/análogos & derivados , Trifosfato de Adenosina/metabolismo , Antineoplásicos/metabolismo , Antivirais/metabolismo , Domínio Catalítico , Cristalografia por Raios X , DNA Primase/química , DNA Primase/metabolismo , Ensaios Enzimáticos , Humanos , Ligação Proteica , Vidarabina/química , Vidarabina/metabolismo
16.
J Mol Biol ; 369(3): 653-64, 2007 Jun 08.
Artigo em Inglês | MEDLINE | ID: mdl-17448496

RESUMO

The salvage of deoxyribonucleosides in the social amoeba Dictyostelium discoideum, which has an extremely A+T-rich genome, was investigated. All native deoxyribonucleosides were phosphorylated by D. discoideum cell extracts and we subcloned three deoxyribonucleoside kinase (dNK) encoding genes. D. discoideum thymidine kinase was similar to the human thymidine kinase 1 and was specific for thymidine with a K(m) of 5.1 microM. The other two cloned kinases were phylogenetically closer to bacterial deoxyribonucleoside kinases than to the eukaryotic enzymes. D. discoideum deoxyadenosine kinase (DddAK) had a K(m) for deoxyadenosine of 22.7 microM and a k(cat) of 3.7 s(-1) and could not efficiently phosphorylate any other native deoxyribonucleoside. D. discoideum deoxyguanosine kinase was also a purine-specific kinase and phosphorylated significantly only deoxyguanosine, with a K(m) of 1.4 microM and a k(cat) of 3 s(-1). The two purine-specific deoxyribonucleoside kinases could represent ancient enzymes present in the common ancestor of bacteria and eukaryotes but remaining only in a few eukaryote lineages. The narrow substrate specificity of the D. discoideum dNKs reflects the biased genome composition and we attempted to explain the strict preference of DddAK for deoxyadenosine by modeling the active center with different substrates. Apart from its native substrate, deoxyadenosine, DddAK efficiently phosphorylated fludarabine. Hence, DddAK could be used in the enzymatic production of fludarabine monophosphate, a drug used in the treatment of chronic lymphocytic leukemia.


Assuntos
Desoxirribonucleosídeos/química , Dictyostelium/metabolismo , Regulação da Expressão Gênica , Fosfotransferases (Aceptor do Grupo Álcool)/metabolismo , Purinas/química , Animais , Antineoplásicos/farmacologia , Diferenciação Celular , Dictyostelium/genética , Cinética , Modelos Moleculares , Dados de Sequência Molecular , Fosforilação , Proteínas Recombinantes/química , Especificidade por Substrato , Vidarabina/análogos & derivados , Vidarabina/química
17.
J Pharm Sci ; 97(4): 1508-18, 2008 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-17722102

RESUMO

Fludarabine (FLU)-based combination therapies are commonly used to treat low-grade lymphoma and chronic lymphocytic leukemia (CLL) patients. In vitro and clinical studies have indicated advantages when FLU and mitoxantrone (MTO) are applied in combination. To further enhance this effect, these two agents were coencapsulated in liposomes. FLU was passively encapsulated during liposome formation, and MTO was loaded with a transmembrane pH gradient. Entrapment efficiency, particle size, stability, and drug release kinetics were characterized. In vitro cytotoxicity study was carried out in two representative B-cell lines: Wac3CD5 and Raji. Synergism as measured by combination index (CI) was observed in cells treated with liposomes coencapsulating FLU and MTO. Annexin V/propidium iodide (PI) analysis further confirmed that coencapsulated FLU and MTO improved the percentage of apoptosis among primary CLL cells. These data suggest that adopting liposomes containing coencapsulated drug combinations constitutes a potential strategy to promote drug synergism and may have utility in the treatment of leukemia and lymphoma.


Assuntos
Protocolos de Quimioterapia Combinada Antineoplásica/administração & dosagem , Leucemia Linfocítica Crônica de Células B/tratamento farmacológico , Mitoxantrona/administração & dosagem , Vidarabina/análogos & derivados , Apoptose/efeitos dos fármacos , Química Farmacêutica , Estabilidade de Medicamentos , Leucemia Linfocítica Crônica de Células B/patologia , Lipossomos , Mitoxantrona/química , Mitoxantrona/farmacologia , Solubilidade , Vidarabina/administração & dosagem , Vidarabina/química , Vidarabina/farmacologia
18.
Eur J Mass Spectrom (Chichester) ; 14(5): 281-97, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-19023146

RESUMO

The collision induced dissociation (CID) mass spectra were obtained for the X(+)-adducts (X=Na(+) or Li(+)) of five tetracyclines, four pyrimidine and three purine derivatives and their fully D-exchanged species in which the labile hydrogens were replaced by deuterium by either gas phase or liquid phase exchange. The CID spectra were obtained for [M + Na](+) and [M + Li](+) and the exchanged analogs, [M(D) + Na](+) and [M(D) + Li](+), and compositions of product ions and mechanisms of decomposition were determined by comparison of the MS(n) spectra of the undeuterated and deuterated species. Metal ions are bound to the base of purine and pyrimidine antiviral agents and dissociate primarily to give the metal complexes of the base [B + X](+). For vidarabine monophosphate, however, the metal ions are bound to the phosphate group, resulting in unique and characteristic cleavage reactions not observed in the uncomplexed system, and dissociate through the loss of phosphate and/or phosphate metal ion complex. The [B + X](+) of these antiviral agents are relatively stable and show no or little fragmentation compared to [B + H](+). The CID of [B + X](+) of guanine derivative occurs mainly through elimination of NH(3) and that of trifluoromethyl uracil dissociates primarily through the loss of HF. For tetracyclines, metal ions are bound to ring A at the tricarbonylmethyl group and dissociate initially by the loss of NH(3)/ND(3) from [M(H) + X](+) and [M(D) + X](+). The CID spectra of [M + X](+) of tetracyclines are somewhat similar to those of [M + H](+). The dominant fragments from the metal complexes of these compounds are charge remote decompositions involving molecular rearrangements and the loss of small stable molecules. Additionally, tetracyclines and the antiviral agents show more selectivity towards Li+ ion than the corresponding complexes with Na(+) or K(+).


Assuntos
Antivirais/química , Medição da Troca de Deutério , Metais Alcalinos/química , Espectrometria de Massas por Ionização por Electrospray , Tetraciclinas/química , Aciclovir/química , Aciclovir/metabolismo , Antivirais/metabolismo , Desoxiuridina/química , Desoxiuridina/metabolismo , Metais Alcalinos/metabolismo , Purinas/química , Purinas/metabolismo , Tetraciclinas/metabolismo , Trifluridina/química , Trifluridina/metabolismo , Vidarabina/química , Vidarabina/metabolismo , Fosfato de Vidarabina/química , Fosfato de Vidarabina/metabolismo , Zidovudina/química , Zidovudina/metabolismo
19.
Nucleosides Nucleotides Nucleic Acids ; 27(5): 449-59, 2008 May.
Artigo em Inglês | MEDLINE | ID: mdl-18569784

RESUMO

A reliable and efficient protocol for the synthesis of 2 '-([1,2,3]triazol-1-yl)-2 '-deoxyadenosine derivatives from vidarabine is presented. Vidarabine was converted to 2'-azido-2'-deoxy-3',5-O-(tetraisopropyldisiloxane-1,3-diyl)-adenosine. This azide was used as the starting material for the Cu(I)-catalyzed parallel synthesis of 1,2,3-triazoles using a variety of alkynes. The reactions proceeded in good yield and gave almost exclusively the 1,4-disubstituted 1,2,3-triazoles.


Assuntos
Desoxiadenosinas/síntese química , Aminoacil-tRNA Sintetases/antagonistas & inibidores , Desoxiadenosinas/química , Desenho de Fármacos , Inibidores Enzimáticos/síntese química , Inibidores Enzimáticos/química , Espectroscopia de Ressonância Magnética , Estrutura Molecular , Triazóis/síntese química , Triazóis/química , Vidarabina/análogos & derivados , Vidarabina/química
20.
Curr Pharm Des ; 24(11): 1224-1240, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-29141539

RESUMO

BACKGROUND: Unintentional passive diffusion of conventional small molecular weight pharmaceuticals across intact membranes of normal healthy cells in tissues and organ systems induces sequelae that limit therapeutic dosage and duration of administration. Selective "targeted" delivery of pharmaceuticals is a molecular strategy that can potentially provide heightened margins-of-safety with greater potency and improved efficacy. MATERIALS AND METHODS: Monophosphate analogs of fludarabine, gemcitabine, and dexamethasone were combined with a carbodiimide reagent in the presence of imidazole to produce reactive intermediates that were subsequently covalently bound to monoclonal anti-IGF-1R or anti-EGFR IgG-immunoglobulin. The resulting covalent immunopharmaceutical end-products, fludarabine-(5'-phosphoramidate)-[anti-IGF-1R], gemcitabine-(5'- phosphoramidate)-[anti-IGF-1R], and dexamethasone-(C21-phosphoramidate)-[anti-EGFR] were evaluated by SDS-PAGE/chemiluminescent autoradiography (fragmentation/polymerization detection), UV spectrophotometric absorbance (purity; molar-incorporation-index), cell-ELISA (retained selective binding-avidity), and cell vitality-viability (selectively "targeted" anti-neoplastic cytotoxicity). RESULTS: Maximum selectively "targeted" anti-neoplastic cytotoxicity of fludarabine-(5'-phosphoramidate)-[anti- IGF-1R], gemcitabine-(5'-phosphoramidate)-[anti-IGF-1R], and dexamethasone-(C21-phosphoramidate)-[anti- EGFR] was detected at the pharmaceutical-equivalent concentrations of 10-5 M (94.7%), 10-7 M (93.1%), and 10-7 M (64.9%) respectively. DISCUSSION: Organic chemistry reactions were optimized in a template multi-stage synthesis regimen for fludarabine-( 5'-phosphoramidate)-[anti-IGF-1R], gemcitabine-(5'-phosphoramidate)-[anti-IGF-1R], and dexamethasone-( C21-phosphoramidate)-[anti-EGFR]. Attributes of the synthesis regimen include; [-i-] covalent bonding of pharmaceutical moeities at high molar incorporation indexes, [-ii-] implementation of organic chemistry reactions in a non-dedicated synthesis regimen allowing component substitution and [-iii-] optional preservation of presynthesized amine-reactive pharmaceutical intermediates for on-demand immunopharmaceutical synthesis. Attributes of the covalent immunopharmaceuticals are; absence of any synthetically introduced chemical groups, retained IgG-immunoglobulin binding-avidity and potent selective "targeted" anti-neoplastic cytotoxic potency. Under in-vivo conditions, supplemental anti-neoplastic cytotoxicity is realized through trophic receptor inhibition and activation of multiple cytotoxic host immune responses.


Assuntos
Antineoplásicos/farmacologia , Desoxicitidina/análogos & derivados , Dexametasona/farmacologia , Resistência a Múltiplos Medicamentos/efeitos dos fármacos , Resistencia a Medicamentos Antineoplásicos/efeitos dos fármacos , Vidarabina/análogos & derivados , Células A549 , Antineoplásicos/síntese química , Antineoplásicos/química , Proliferação de Células/efeitos dos fármacos , Desoxicitidina/síntese química , Desoxicitidina/química , Desoxicitidina/farmacologia , Dexametasona/síntese química , Dexametasona/química , Relação Dose-Resposta a Droga , Ensaio de Imunoadsorção Enzimática , Humanos , Estrutura Molecular , Relação Estrutura-Atividade , Células Tumorais Cultivadas , Vidarabina/síntese química , Vidarabina/química , Vidarabina/farmacologia , Gencitabina
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