DAIRYdb: a manually curated reference database for improved taxonomy annotation of 16S rRNA gene sequences from dairy products.

Meola, Marco; Rifa, Etienne; Shani, Noam; Delbès, Céline; Berthoud, Hélène; Chassard, Christophe

Meola, Marco; Rifa, Etienne; Shani, Noam; Delbès, Céline; Berthoud, Hélène; Chassard, Christophe.

Afiliação

Meola M; Agroscope, Competence Division Methods Development and Analytics, Research Group Fermenting Organisms, Schwarzenburgstrasse 161, Bern, 3003, Switzerland. marco.meola@agroscope.admin.ch.
Rifa E; Université Clermont Auvergne, INRA, VetAgro Sup, UMRF, 20 côte de Reyne, Aurillac, 15000, France.
Shani N; Agroscope, Competence Division Methods Development and Analytics, Research Group Fermenting Organisms, Schwarzenburgstrasse 161, Bern, 3003, Switzerland.
Delbès C; Université Clermont Auvergne, INRA, VetAgro Sup, UMRF, 20 côte de Reyne, Aurillac, 15000, France.
Berthoud H; Agroscope, Competence Division Methods Development and Analytics, Research Group Fermenting Organisms, Schwarzenburgstrasse 161, Bern, 3003, Switzerland.
Chassard C; Université Clermont Auvergne, INRA, VetAgro Sup, UMRF, 20 côte de Reyne, Aurillac, 15000, France.

BMC Genomics ; 20(1): 560, 2019 Jul 08.

Article em En | MEDLINE | ID: mdl-31286860

Assuntos

Classificação/métodos; Laticínios/microbiologia; Bases de Dados Genéticas; Microbiota/genética; RNA Ribossômico 16S/genética; Filogenia

Palavras-chave

16S; Accuracy; Cheese; Dairy; Database; Microbiome; Milk; OTU classification; Starter; Taxonomy annotation; Teat; Whey

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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Ano de publicação: 2019 Tipo de documento: Article

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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Ano de publicação: 2019 Tipo de documento: Article