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Accuracy of 1H-1H distances measured using frequency selective recoupling and fast magic-angle spinning.
Potnuru, Lokeswara Rao; Duong, Nghia Tuan; Ahlawat, Sahil; Raran-Kurussi, Sreejith; Ernst, Matthias; Nishiyama, Yusuke; Agarwal, Vipin.
Afiliação
  • Potnuru LR; TIFR Centre for Interdisciplinary Sciences, Tata Institute of Fundamental Research Hyderabad, Survey No. 36/P, Gopanpally, Ranga Reddy District, Hyderabad 500 107, India.
  • Duong NT; NMR Science and Development Division, RIKEN SPring-8 Center, and Nano-Crystallography Unit, RIKEN-JEOL Collaboration Center, Yokohama, Kanagawa 230-0045, Japan.
  • Ahlawat S; TIFR Centre for Interdisciplinary Sciences, Tata Institute of Fundamental Research Hyderabad, Survey No. 36/P, Gopanpally, Ranga Reddy District, Hyderabad 500 107, India.
  • Raran-Kurussi S; TIFR Centre for Interdisciplinary Sciences, Tata Institute of Fundamental Research Hyderabad, Survey No. 36/P, Gopanpally, Ranga Reddy District, Hyderabad 500 107, India.
  • Ernst M; Physical Chemistry, ETH Zurich, Vladimir-Prelog-Weg 2, 8093 Zurich, Switzerland.
  • Nishiyama Y; NMR Science and Development Division, RIKEN SPring-8 Center, and Nano-Crystallography Unit, RIKEN-JEOL Collaboration Center, Yokohama, Kanagawa 230-0045, Japan.
  • Agarwal V; TIFR Centre for Interdisciplinary Sciences, Tata Institute of Fundamental Research Hyderabad, Survey No. 36/P, Gopanpally, Ranga Reddy District, Hyderabad 500 107, India.
J Chem Phys ; 153(8): 084202, 2020 Aug 28.
Article em En | MEDLINE | ID: mdl-32872876
ABSTRACT
Selective recoupling of protons (SERP) is a method to selectively and quantitatively measure magnetic dipole-dipole interaction between protons and, in turn, the proton-proton distance in solid-state samples at fast magic-angle spinning. We present a bimodal operator-based Floquet approach to describe the numerically optimized SERP recoupling sequence. The description calculates the allowed terms in the first-order effective Hamiltonian, explains the origin of selectivity during recoupling, and shows how different terms are modulated as a function of the radio frequency amplitude and the phase of the sequence. Analytical and numerical simulations have been used to evaluate the effect of higher-order terms and offsets on the polarization transfer efficiency and quantitative distance measurement. The experimentally measured 1H-1H distances on a fully protonated thymol sample are ∼10%-15% shorter than those reported from diffraction studies. A semi-quantitative model combined with extensive numerical simulations is used to rationalize the effect of the third-spin and the role of different parameters in the experimentally observed shorter distances. Measurements at high magnetic fields improve the match between experimental and diffraction distances. The measurement of 1H-1H couplings at offsets different from the SERP-offset has also been explored. Experiments were also performed on a perdeuterated ubiquitin sample to demonstrate the feasibility of simultaneously measuring multiple quantitative distances and to evaluate the accuracy of the measured distance in the absence of multispin effects. The estimation of proton-proton distances provides a boost to structural characterization of small pharmaceuticals and biomolecules, given that the positions of protons are generally not well defined in x-ray structures.

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Ano de publicação: 2020 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Ano de publicação: 2020 Tipo de documento: Article