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Assessing reproducibility of inherited variants detected with short-read whole genome sequencing.
Pan, Bohu; Ren, Luyao; Onuchic, Vitor; Guan, Meijian; Kusko, Rebecca; Bruinsma, Steve; Trigg, Len; Scherer, Andreas; Ning, Baitang; Zhang, Chaoyang; Glidewell-Kenney, Christine; Xiao, Chunlin; Donaldson, Eric; Sedlazeck, Fritz J; Schroth, Gary; Yavas, Gokhan; Grunenwald, Haiying; Chen, Haodong; Meinholz, Heather; Meehan, Joe; Wang, Jing; Yang, Jingcheng; Foox, Jonathan; Shang, Jun; Miclaus, Kelci; Dong, Lianhua; Shi, Leming; Mohiyuddin, Marghoob; Pirooznia, Mehdi; Gong, Ping; Golshani, Rooz; Wolfinger, Russ; Lababidi, Samir; Sahraeian, Sayed Mohammad Ebrahim; Sherry, Steve; Han, Tao; Chen, Tao; Shi, Tieliu; Hou, Wanwan; Ge, Weigong; Zou, Wen; Guo, Wenjing; Bao, Wenjun; Xiao, Wenzhong; Fan, Xiaohui; Gondo, Yoichi; Yu, Ying; Zhao, Yongmei; Su, Zhenqiang; Liu, Zhichao.
Afiliação
  • Pan B; Division of Bioinformatics and Biostatistics, National Center for Toxicological Research, US Food and Drug Administration, Jefferson, AR, 72079, USA.
  • Ren L; State Key Laboratory of Genetic Engineering, School of Life Sciences and Shanghai Cancer Center, Fudan University, Shanghai, 200438, China.
  • Onuchic V; Human Phenome Institute, Fudan University, Shanghai, 200438, China.
  • Guan M; Illumina Inc., San Diego, CA, 92122, USA.
  • Kusko R; SAS Institute Inc., Cary, NC, 27513, USA.
  • Bruinsma S; Immuneering Corporation, Cambridge, MA, 02142, USA.
  • Trigg L; Illumina Inc., San Diego, CA, 92122, USA.
  • Scherer A; Real Time Genomics, Hamilton, New Zealand.
  • Ning B; Institute for Molecular Medicine Finland (FIMM), University of Helsinki, Helsinki, Finland.
  • Zhang C; EATRIS ERIC- European Infrastructure for Translational Medicine, Amsterdam, the Netherlands.
  • Glidewell-Kenney C; Division of Bioinformatics and Biostatistics, National Center for Toxicological Research, US Food and Drug Administration, Jefferson, AR, 72079, USA.
  • Xiao C; School of Computing Sciences and Computer Engineering, University of Southern Mississippi, Hattiesburg, MS, 39406, USA.
  • Donaldson E; Illumina Inc., San Diego, CA, 92122, USA.
  • Sedlazeck FJ; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, 20894, USA.
  • Schroth G; Center for Drug Evaluation and Research, Food and Drug Administration, Silver Spring, MD, 20993, USA.
  • Yavas G; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.
  • Grunenwald H; Illumina Inc., San Diego, CA, 92122, USA.
  • Chen H; Division of Bioinformatics and Biostatistics, National Center for Toxicological Research, US Food and Drug Administration, Jefferson, AR, 72079, USA.
  • Meinholz H; Illumina Inc., San Diego, CA, 92122, USA.
  • Meehan J; Sentieon Inc., San Jose, CA, 95134, USA.
  • Wang J; Illumina Inc., San Diego, CA, 92122, USA.
  • Yang J; Division of Bioinformatics and Biostatistics, National Center for Toxicological Research, US Food and Drug Administration, Jefferson, AR, 72079, USA.
  • Foox J; Center for Advanced Measurement Science, National Institute of Metrology, Beijing, 100013, China.
  • Shang J; State Key Laboratory of Genetic Engineering, School of Life Sciences and Shanghai Cancer Center, Fudan University, Shanghai, 200438, China.
  • Miclaus K; Human Phenome Institute, Fudan University, Shanghai, 200438, China.
  • Dong L; Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, 10021, USA.
  • Shi L; State Key Laboratory of Genetic Engineering, School of Life Sciences and Shanghai Cancer Center, Fudan University, Shanghai, 200438, China.
  • Mohiyuddin M; Human Phenome Institute, Fudan University, Shanghai, 200438, China.
  • Pirooznia M; SAS Institute Inc., Cary, NC, 27513, USA.
  • Gong P; Center for Advanced Measurement Science, National Institute of Metrology, Beijing, 100013, China.
  • Golshani R; State Key Laboratory of Genetic Engineering, School of Life Sciences and Shanghai Cancer Center, Fudan University, Shanghai, 200438, China.
  • Wolfinger R; Human Phenome Institute, Fudan University, Shanghai, 200438, China.
  • Lababidi S; Roche Sequencing Solutions, Santa Clara, CA, 95050, USA.
  • Sahraeian SME; Bioinformatics and Computational Biology Laboratory, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD, 20892, USA.
  • Sherry S; Environmental Laboratory, U.S. Army Engineer Research and Development Center, Vicksburg, MS, 39180, USA.
  • Han T; Illumina Inc., San Diego, CA, 92122, USA.
  • Chen T; SAS Institute Inc., Cary, NC, 27513, USA.
  • Shi T; Office of Health Informatics, Office of the Commissioner, US Food and Drug Administration, Silver Spring, MD, 20993, USA.
  • Hou W; Roche Sequencing Solutions, Santa Clara, CA, 95050, USA.
  • Ge W; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, 20894, USA.
  • Zou W; Division of Bioinformatics and Biostatistics, National Center for Toxicological Research, US Food and Drug Administration, Jefferson, AR, 72079, USA.
  • Guo W; Division of Bioinformatics and Biostatistics, National Center for Toxicological Research, US Food and Drug Administration, Jefferson, AR, 72079, USA.
  • Bao W; The Center for Bioinformatics and Computational Biology, Shanghai Key Laboratory of Regulatory Biology, Institute of Biomedical Sciences and School of Life Sciences, East China Normal University, Shanghai, 200241, China.
  • Xiao W; State Key Laboratory of Genetic Engineering, School of Life Sciences and Shanghai Cancer Center, Fudan University, Shanghai, 200438, China.
  • Fan X; Human Phenome Institute, Fudan University, Shanghai, 200438, China.
  • Gondo Y; Division of Bioinformatics and Biostatistics, National Center for Toxicological Research, US Food and Drug Administration, Jefferson, AR, 72079, USA.
  • Yu Y; Division of Bioinformatics and Biostatistics, National Center for Toxicological Research, US Food and Drug Administration, Jefferson, AR, 72079, USA.
  • Zhao Y; Division of Bioinformatics and Biostatistics, National Center for Toxicological Research, US Food and Drug Administration, Jefferson, AR, 72079, USA.
  • Su Z; SAS Institute Inc., Cary, NC, 27513, USA.
  • Liu Z; Stanford Genome Technology Center, Stanford University School of Medicine, Palo Alto, CA, 94305, USA.
Genome Biol ; 23(1): 2, 2022 01 03.
Article em En | MEDLINE | ID: mdl-34980216
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Limite: Humans Idioma: En Ano de publicação: 2022 Tipo de documento: Article
Texto completo
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PubMed Links
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Limite: Humans Idioma: En Ano de publicação: 2022 Tipo de documento: Article