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1.
Cell ; 177(6): 1419-1435.e31, 2019 05 30.
Artículo en Inglés | MEDLINE | ID: mdl-31056281

RESUMEN

Horse domestication revolutionized warfare and accelerated travel, trade, and the geographic expansion of languages. Here, we present the largest DNA time series for a non-human organism to date, including genome-scale data from 149 ancient animals and 129 ancient genomes (≥1-fold coverage), 87 of which are new. This extensive dataset allows us to assess the modern legacy of past equestrian civilizations. We find that two extinct horse lineages existed during early domestication, one at the far western (Iberia) and the other at the far eastern range (Siberia) of Eurasia. None of these contributed significantly to modern diversity. We show that the influence of Persian-related horse lineages increased following the Islamic conquests in Europe and Asia. Multiple alleles associated with elite-racing, including at the MSTN "speed gene," only rose in popularity within the last millennium. Finally, the development of modern breeding impacted genetic diversity more dramatically than the previous millennia of human management.


Asunto(s)
Caballos/genética , Animales , Asia , Evolución Biológica , Cruzamiento/historia , ADN Antiguo/análisis , Domesticación , Equidae/genética , Europa (Continente) , Femenino , Variación Genética/genética , Genoma/genética , Historia Antigua , Masculino , Filogenia
2.
Nature ; 598(7882): 634-640, 2021 10.
Artículo en Inglés | MEDLINE | ID: mdl-34671162

RESUMEN

Domestication of horses fundamentally transformed long-range mobility and warfare1. However, modern domesticated breeds do not descend from the earliest domestic horse lineage associated with archaeological evidence of bridling, milking and corralling2-4 at Botai, Central Asia around 3500 BC3. Other longstanding candidate regions for horse domestication, such as Iberia5 and Anatolia6, have also recently been challenged. Thus, the genetic, geographic and temporal origins of modern domestic horses have remained unknown. Here we pinpoint the Western Eurasian steppes, especially the lower Volga-Don region, as the homeland of modern domestic horses. Furthermore, we map the population changes accompanying domestication from 273 ancient horse genomes. This reveals that modern domestic horses ultimately replaced almost all other local populations as they expanded rapidly across Eurasia from about 2000 BC, synchronously with equestrian material culture, including Sintashta spoke-wheeled chariots. We find that equestrianism involved strong selection for critical locomotor and behavioural adaptations at the GSDMC and ZFPM1 genes. Our results reject the commonly held association7 between horseback riding and the massive expansion of Yamnaya steppe pastoralists into Europe around 3000 BC8,9 driving the spread of Indo-European languages10. This contrasts with the scenario in Asia where Indo-Iranian languages, chariots and horses spread together, following the early second millennium BC Sintashta culture11,12.


Asunto(s)
Domesticación , Genética de Población , Caballos , Animales , Arqueología , Asia , ADN Antiguo , Europa (Continente) , Genoma , Pradera , Caballos/genética , Filogenia
3.
Bull Environ Contam Toxicol ; 110(1): 40, 2023 Jan 10.
Artículo en Inglés | MEDLINE | ID: mdl-36627388

RESUMEN

Predictive models were generated to evaluate the degree to which nine metals (Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, and Zn) were absorbed by the leaves, stems and roots of forage sorghum in growing media comprising soil admixed with poultry manure concentrations of 0, 10, 20, 30 and 40 g/kg. The data revealed that the greatest contents of the majority of the metals were evident in the roots rather than in the stems and leaves. A bioaccumulation factor (BAF) < 1 was calculated for Cr, Fe, Ni, Pb and Zn; BAF values for Co, Cu, Mn and Cd were 3.99, 2.33, 1.44 and 1.40, respectively, i.e., > 1. Translocation factor values were < 1 for all metals with the exception of Co, Cr and Ni, which displayed values of 1.20, 1.67 and 1.35 for the leaves, and 1.12, 1.23 and 1.24, respectively, for the stems. The soil pH had a negative association with metal tissues in plant parts. A positive relationship was observed with respect to plant metal contents, electrical conductivity and organic matter quantity. The designed models exhibited a high standard of data precision; any variations between the predicted and experimentally observed contents for the nine metals in the three plant tissue components were nonsignificant. Thus, it was concluded that the presented predictive models constitute a pragmatic tool to establish the safety from risk to human well-being with respect to growing forage sorghum when cultivating media fortified with poultry manure.


Asunto(s)
Metales Pesados , Contaminantes del Suelo , Sorghum , Animales , Humanos , Suelo/química , Estiércol , Metales Pesados/análisis , Aves de Corral , Cadmio , Plomo , Contaminantes del Suelo/análisis , Monitoreo del Ambiente
4.
New Phytol ; 231(3): 1040-1055, 2021 08.
Artículo en Inglés | MEDLINE | ID: mdl-33774818

RESUMEN

Soil salinity is an increasingly global problem which hampers plant growth and crop yield. Plant productivity depends on optimal water-use efficiency and photosynthetic capacity balanced by stomatal conductance. Whether and how stomatal behavior contributes to salt sensitivity or tolerance is currently unknown. This work identifies guard cell-specific signaling networks exerted by a salt-sensitive and salt-tolerant plant under ionic and osmotic stress conditions accompanied by increasing NaCl loads. We challenged soil-grown Arabidopsis thaliana and Thellungiella salsuginea plants with short- and long-term salinity stress and monitored genome-wide gene expression and signals of guard cells that determine their function. Arabidopsis plants suffered from both salt regimes and showed reduced stomatal conductance while Thellungiella displayed no obvious stress symptoms. The salt-dependent gene expression changes of guard cells supported the ability of the halophyte to maintain high potassium to sodium ratios and to attenuate the abscisic acid (ABA) signaling pathway which the glycophyte kept activated despite fading ABA concentrations. Our study shows that salinity stress and even the different tolerances are manifested on a single cell level. Halophytic guard cells are less sensitive than glycophytic guard cells, providing opportunities to manipulate stomatal behavior and improve plant productivity.


Asunto(s)
Proteínas de Arabidopsis , Arabidopsis , Ácido Abscísico , Arabidopsis/metabolismo , Proteínas de Arabidopsis/metabolismo , Transporte Iónico , Estomas de Plantas/metabolismo , Estrés Salino , Plantas Tolerantes a la Sal/metabolismo
5.
Environ Res ; 176: 108536, 2019 09.
Artículo en Inglés | MEDLINE | ID: mdl-31228808

RESUMEN

The conservation of coastal ecosystems and specially mangroves ''blue carbon'' is receiving more attention as consequence of their recognition as high ecosystem carbon stocks and for the fact that these areas are undergoing land conversion. The aim of the present study is to evaluate the impact of land use changes due to conversion of mangroves to shrimp farms on the bulk density (SBD), organic carbon (SOC) concentration, and SOC stock in the sediments along the southern Saudi Arabian Red Sea coast. Shrimp farms and mangrove locations showed significant (P < 0.001) differences in SBD with high mean values in the sediments of shrimp farms. Shrimp farms and mangrove locations showed significant (P < 0.001) SOC concentration differences with high mean values in the sediments of mangroves. Considering the whole depth of sediment interval (0-100 cm), the highest value of SOC stock was recorded at mangroves (29.2 kg C m-2) and the lowest was identified at the locations of shrimp farms (19.9 kg C m-2). The results show that SOC stock of mangroves is 147% higher than that of shrimp farms confirming the fact that anthropogenic factors contributed significantly to SOC stock decrease. The mean cumulative potential carbon dioxide (CO2) emission due to loss soil carbon stock from mangrove conversion to the shrimp ponds was 34.9 kg CO2 m-2. In conclusion, the conversion of mangroves into shrimp farms contributed to the loss of SOC stock, therefore, the preservation of mangrove areas has an important value especially in arid areas such as Saudi Arabia.


Asunto(s)
Acuicultura , Ecosistema , Humedales , Carbono , Océano Índico , Arabia Saudita , Suelo
6.
Syst Biol ; 66(1): e1-e29, 2017 Jan 01.
Artículo en Inglés | MEDLINE | ID: mdl-28173586

RESUMEN

Ever since its emergence in 1984, the field of ancient DNA has struggled to overcome the challenges related to the decay of DNA molecules in the fossil record. With the recent development of high-throughput DNA sequencing technologies and molecular techniques tailored to ultra-damaged templates, it has now come of age, merging together approaches in phylogenomics, population genomics, epigenomics, and metagenomics. Leveraging on complete temporal sample series, ancient DNA provides direct access to the most important dimension in evolution­time, allowing a wealth of fundamental evolutionary processes to be addressed at unprecedented resolution. This review taps into the most recent findings in ancient DNA research to present analyses of ancient genomic and metagenomic data.


Asunto(s)
Evolución Biológica , ADN Antiguo , Investigación/tendencias , Evolución Molecular , Fósiles , Genómica/tendencias
7.
Proc Natl Acad Sci U S A ; 112(50): E6889-97, 2015 Dec 15.
Artículo en Inglés | MEDLINE | ID: mdl-26598656

RESUMEN

Yakutia, Sakha Republic, in the Siberian Far East, represents one of the coldest places on Earth, with winter record temperatures dropping below -70 °C. Nevertheless, Yakutian horses survive all year round in the open air due to striking phenotypic adaptations, including compact body conformations, extremely hairy winter coats, and acute seasonal differences in metabolic activities. The evolutionary origins of Yakutian horses and the genetic basis of their adaptations remain, however, contentious. Here, we present the complete genomes of nine present-day Yakutian horses and two ancient specimens dating from the early 19th century and ∼5,200 y ago. By comparing these genomes with the genomes of two Late Pleistocene, 27 domesticated, and three wild Przewalski's horses, we find that contemporary Yakutian horses do not descend from the native horses that populated the region until the mid-Holocene, but were most likely introduced following the migration of the Yakut people a few centuries ago. Thus, they represent one of the fastest cases of adaptation to the extreme temperatures of the Arctic. We find cis-regulatory mutations to have contributed more than nonsynonymous changes to their adaptation, likely due to the comparatively limited standing variation within gene bodies at the time the population was founded. Genes involved in hair development, body size, and metabolic and hormone signaling pathways represent an essential part of the Yakutian horse adaptive genetic toolkit. Finally, we find evidence for convergent evolution with native human populations and woolly mammoths, suggesting that only a few evolutionary strategies are compatible with survival in extremely cold environments.


Asunto(s)
Adaptación Fisiológica/genética , Frío , Caballos/fisiología , Animales , Regiones Árticas , Evolución Molecular , Genoma , Caballos/genética , Siberia
8.
New Phytol ; 216(1): 150-162, 2017 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-28670699

RESUMEN

Date palm Phoenix dactylifera is a desert crop well adapted to survive and produce fruits under extreme drought and heat. How are palms under such harsh environmental conditions able to limit transpirational water loss? Here, we analysed the cuticular waxes, stomata structure and function, and molecular biology of guard cells from P. dactylifera. To understand the stomatal response to the water stress phytohormone of the desert plant, we cloned the major elements necessary for guard cell fast abscisic acid (ABA) signalling and reconstituted this ABA signalosome in Xenopus oocytes. The PhoenixSLAC1-type anion channel is regulated by ABA kinase PdOST1. Energy-dispersive X-ray analysis (EDXA) demonstrated that date palm guard cells release chloride during stomatal closure. However, in Cl- medium, PdOST1 did not activate the desert plant anion channel PdSLAC1 per se. Only when nitrate was present at the extracellular face of the anion channel did the OST1-gated PdSLAC1 open, thus enabling chloride release. In the presence of nitrate, ABA enhanced and accelerated stomatal closure. Our findings indicate that, in date palm, the guard cell osmotic motor driving stomatal closure uses nitrate as the signal to open the major anion channel SLAC1. This initiates guard cell depolarization and the release of anions together with potassium.


Asunto(s)
Aniones/metabolismo , Clima Desértico , Nitratos/farmacología , Phoeniceae/fisiología , Proteínas de Plantas/metabolismo , Estomas de Plantas/fisiología , Ácido Abscísico/metabolismo , Cloruros/metabolismo , Sequías , Luz , Ósmosis , Phoeniceae/efectos de los fármacos , Phoeniceae/efectos de la radiación , Phoeniceae/ultraestructura , Estomas de Plantas/citología , Estomas de Plantas/efectos de los fármacos , Estomas de Plantas/ultraestructura , ARN de Planta/metabolismo , Fracciones Subcelulares/metabolismo , Ceras/metabolismo
9.
Proc Natl Acad Sci U S A ; 111(52): 18655-60, 2014 Dec 30.
Artículo en Inglés | MEDLINE | ID: mdl-25453089

RESUMEN

Horses, asses, and zebras belong to a single genus, Equus, which emerged 4.0-4.5 Mya. Although the equine fossil record represents a textbook example of evolution, the succession of events that gave rise to the diversity of species existing today remains unclear. Here we present six genomes from each living species of asses and zebras. This completes the set of genomes available for all extant species in the genus, which was hitherto represented only by the horse and the domestic donkey. In addition, we used a museum specimen to characterize the genome of the quagga zebra, which was driven to extinction in the early 1900s. We scan the genomes for lineage-specific adaptations and identify 48 genes that have evolved under positive selection and are involved in olfaction, immune response, development, locomotion, and behavior. Our extensive genome dataset reveals a highly dynamic demographic history with synchronous expansions and collapses on different continents during the last 400 ky after major climatic events. We show that the earliest speciation occurred with gene flow in Northern America, and that the ancestor of present-day asses and zebras dispersed into the Old World 2.1-3.4 Mya. Strikingly, we also find evidence for gene flow involving three contemporary equine species despite chromosomal numbers varying from 16 pairs to 31 pairs. These findings challenge the claim that the accumulation of chromosomal rearrangements drive complete reproductive isolation, and promote equids as a fundamental model for understanding the interplay between chromosomal structure, gene flow, and, ultimately, speciation.


Asunto(s)
Cromosomas de los Mamíferos/genética , Equidae/genética , Evolución Molecular , Extinción Biológica , Flujo Génico , África , Animales , América del Norte
10.
Proc Natl Acad Sci U S A ; 111(52): E5661-9, 2014 Dec 30.
Artículo en Inglés | MEDLINE | ID: mdl-25512547

RESUMEN

The domestication of the horse ∼ 5.5 kya and the emergence of mounted riding, chariotry, and cavalry dramatically transformed human civilization. However, the genetics underlying horse domestication are difficult to reconstruct, given the near extinction of wild horses. We therefore sequenced two ancient horse genomes from Taymyr, Russia (at 7.4- and 24.3-fold coverage), both predating the earliest archeological evidence of domestication. We compared these genomes with genomes of domesticated horses and the wild Przewalski's horse and found genetic structure within Eurasia in the Late Pleistocene, with the ancient population contributing significantly to the genetic variation of domesticated breeds. We furthermore identified a conservative set of 125 potential domestication targets using four complementary scans for genes that have undergone positive selection. One group of genes is involved in muscular and limb development, articular junctions, and the cardiac system, and may represent physiological adaptations to human utilization. A second group consists of genes with cognitive functions, including social behavior, learning capabilities, fear response, and agreeableness, which may have been key for taming horses. We also found that domestication is associated with inbreeding and an excess of deleterious mutations. This genetic load is in line with the "cost of domestication" hypothesis also reported for rice, tomatoes, and dogs, and it is generally attributed to the relaxation of purifying selection resulting from the strong demographic bottlenecks accompanying domestication. Our work demonstrates the power of ancient genomes to reconstruct the complex genetic changes that transformed wild animals into their domesticated forms, and the population context in which this process took place.


Asunto(s)
Animales Domésticos/genética , Evolución Molecular , Genoma/fisiología , Caballos/genética , Animales , Sistema Cardiovascular/anatomía & histología , Perros , Miembro Posterior/anatomía & histología , Miembro Posterior/fisiología , Caballos/anatomía & histología , Humanos , Endogamia , Federación de Rusia
11.
Environ Toxicol Pharmacol ; 101: 104204, 2023 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-37391049

RESUMEN

Microplastics (MPs) are in all environmental compartments, including atmosphere, terrestrial, and aquatic environments as well as in marine organisms, foods, drinking water, and indoor and outdoor environments. MPs can enter the human body through the food chain and contaminated environment. Ingestion, inhalation, and dermal contact are the routes of their entry into the human body. Recent studies reporting the detection of MPs within the human body have raised concern among the scientific community as the knowledge about human exposure is still very limited and their impact on health is not well-understood yet. In this review article, we briefly cover the reports evidencing MP detection within the human body, e.g., stool, placenta, lungs, liver, sputum, breast milk, and blood. A concise synopsis of sample preparation and analysis of such human matrices is also provided. This article also presents a summary of the effect of MPs on human cell lines and human health.


Asunto(s)
Microplásticos , Contaminantes Químicos del Agua , Humanos , Microplásticos/toxicidad , Plásticos/análisis , Monitoreo del Ambiente , Contaminantes Químicos del Agua/análisis , Cadena Alimentaria
12.
Sci Total Environ ; 888: 164166, 2023 Aug 25.
Artículo en Inglés | MEDLINE | ID: mdl-37201802

RESUMEN

Recently, environment pollution around the globe has increased because of anthropogenic activities. As part of the biota, plants can assimilate the compounds present in air, water and soil and respond to changes in surround conditions, for that, they can be used as bioindicators of global pollution. However, urban plants' ability to monitor organic pollutants in air, soil, and water have not been profoundly studied yet. Anthropogenic contamination produced by five different types of pollutants [polycyclic aromatic hydrocarbons (PAHs), pharmaceuticals and personal care products (PPCPs), perfluoroalkyl substances (PFASs), pesticides and organophosphorus flame retardants (OPFRs)] has been studied in Riyadh and Abha areas (Saudi Arabia). In addition to the points in both cities, a control point located in the Asir National Park (close to Abha), which is little affected by human activity, was used. The 5 groups of contaminants were found with different but high detection frequencies from 85 % to 100 % in wild and ruderal plants. PAHs were detected in all the analyzed samples at the highest average sum of concentrations (ΣPAHs) 1486 ng·g-1 dry weight (d.w.). Statistically significant differences were obtained between Riyadh, Abha and the point located in the national park (p < 0.05). ΣPAHS in Riyadh >> ΣPAHs in Abha > ΣPAHs in the National Park. Values of the average sum of concentrations for the other groups of contaminants ΣPPCPs, ΣPFASs, Σpesticides and ΣOPFRs were 420.5, 171, 48 and 47 ng g-1 d.w., respectively. High values of PPCPs are due to the presence of salicylic acid. Differences in the average sum of each type of contaminant concentrations between cities were not statistically significant. The results of this assessment of wild and ruderal plants as bioindicators for 5 types of organic contaminants suggest that they can be used to monitor anthropogenic contaminants in the terrestrial environment.


Asunto(s)
Contaminantes Ambientales , Hidrocarburos Policíclicos Aromáticos , Humanos , Monitoreo del Ambiente , Biomarcadores Ambientales , Suelo , Arabia Saudita , Hidrocarburos Policíclicos Aromáticos/análisis
13.
Animals (Basel) ; 13(18)2023 Sep 14.
Artículo en Inglés | MEDLINE | ID: mdl-37760320

RESUMEN

Recognizing, assessing, and responding to threats is critical for survival in the wild. Birds, especially in their role as parents, must decide whether to flee or delay flight when threatened. This study examines how age, reproductive stage, and the presence of a mate influence flight initiation distance (FID) and nest recess duration in white storks. Analyzing the data with a generalized additive mixed model (GAMM), we found significant correlations between FID and age, reproductive stage, and presence of a mate. These results suggest that the trade-off between current and future reproduction shifts during critical breeding periods, such as incubation and nestling care. To increase breeding success, White Storks appear willing to take risks and extend their stay in the nest when offspring are most valuable and vulnerable. In the presence of a mate, individuals leave the nest earlier, suggesting possible sexual conflict over parental care. The duration of nest abandonment is consistent with FID, except for age. These results illustrate how parental age, brood value, vulnerability, and sexual dynamics influence white stork flight decisions in complex ways. Understanding these dynamics enriches our knowledge of bird behavior and adaptations to environmental challenges and highlights the complexity of parental decision making.

14.
Science ; 379(6639): 1316-1323, 2023 03 31.
Artículo en Inglés | MEDLINE | ID: mdl-36996225

RESUMEN

The horse is central to many Indigenous cultures across the American Southwest and the Great Plains. However, when and how horses were first integrated into Indigenous lifeways remain contentious, with extant models derived largely from colonial records. We conducted an interdisciplinary study of an assemblage of historic archaeological horse remains, integrating genomic, isotopic, radiocarbon, and paleopathological evidence. Archaeological and modern North American horses show strong Iberian genetic affinities, with later influx from British sources, but no Viking proximity. Horses rapidly spread from the south into the northern Rockies and central plains by the first half of the 17th century CE, likely through Indigenous exchange networks. They were deeply integrated into Indigenous societies before the arrival of 18th-century European observers, as reflected in herd management, ceremonial practices, and culture.


Asunto(s)
Animales Domésticos , Domesticación , Caballos , Animales , Humanos , Arqueología , Estados Unidos
15.
Saudi J Biol Sci ; 29(5): 3194-3206, 2022 May.
Artículo en Inglés | MEDLINE | ID: mdl-35844430

RESUMEN

As the direct effects of climate change on the hydrological regime, Saudi Arabia has constructed more than 522 dams of various capacities as part of economic and environmental development. The study aims to assess the impact of dams on plant diversity, vegetation structure and soil in Saudi Arabia. Thirty-five stands were selected from the dams of different sizes of Saudi Arabia. Vegetation samples were established before (upstream) and after (downstream) the dam, and at the undammed (unaffected by the dam) to compare species diversity in the dam sites and undammed sites and to document the potential effects of dams on vegetation structure. A total of 151 plant species belonging to 36 families have been recorded. The vegetation associations are essentially shrubby with widespread annuals. Six novel associations were identified with the application of TWINSPAN, DCA, and CCA programs. They were named after the characteristic species as follows: VG I: Acacia gerrardii-Caralluma retrospiciens; VGII: Acacia tortilis-Maerua oblongifolia; VGIII: Lycium shawii-Farsetia aegyptiaca; VG IV: Farsetia stylosa-Cornulaca monocantha; VG V: Suaeda aegyptiaca-Salsola imbricata-Prosopis farcta and VGVI: Xanthium strumarium-Ochradenus baccatus. These plant communities are evaluated and discussed according to their floristic structure, vegetation diversity and edaphic variables. The riparian or streamside zones upstream and downstream that are periodically flooded contain highly diverse plant communities that are structured by flooding, which creates disturbance and acts as a dispersal mechanism for plants than undammed sites.

16.
Saudi J Biol Sci ; 28(1): 1100-1108, 2021 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-33199969

RESUMEN

The severe acute respiratory syndrome coronavirus, identified as SARS-CoV-2, initially established in Wuhan, China at the end of 2019, affects respiratory infections known as COVID-19. In an extraordinary manner, COVID-19 is affecting human life and has transformed a global public health issue into a crisis. Natural products are already recognized owing to the massive advantageous window and efficient antioxidant, antiviral immunomodulatory, and anti-inflammatory belongings. Additionally, the object of the present study was to demonstrate the inhibitory potential of the natural products coumarins and its analogues alongside SARS coronavirus. The present work, focuses on the synthesis of new coumarin analogues and characterized by FT-IR, 1H and 13C NMR, elemental analyses, and mass spectra. The recently synthesised compounds were projected conceptual association for COVID-19 protease and also to explore in anticipation if this protein will help target protease inhibitor drugs such as Calanolide A, Cardatolide A, Collinin, Inophyllum A, Mesuol, Isomesuol, Pteryxin, Rutamarin, Seselin and Suksdorin. The natural coumarin analogues docking scores were compared to standard Hydroxychloroquine. While the 3D module of SARS coronavirus main protease was predicted with the SWISS MODEL web server, as well as biochemical interaction tests were performed with the AutoDock Vina tool between the target protein with ligands. This research further showed that all the protease inhibitors accessed the target protein with negative dock energy. Molecular docking studies found that the natural coumarin analogue Inophyllum A showed an exceptional potential for inhibition with a binding energy of -8.4 kcal/mol. The synthetic coumarin analogues 1m and 1p both demonstrated a similar binding energy, inhibition potential of -7.9 kcal / mol as opposed to hydroxychloroquine and co-crystallized ligand alpha-ketoamide with binding energy values of -5.8 and -6.6 kcal / mol. All compounds evaluated were known as drug-like in nature, passing Lipinski's "Law of 5" with 0 violations except for alpha-ketoamide, passing Lipinski's "Rule of 5" with 1 violation (MW > 500). The inhibitor binding in silico research thus offers a structural understanding of COVID-19 and molecular interactions across the known protease inhibitors centred on the findings of the multiple sequence alliance.

17.
J Hazard Mater ; 416: 125747, 2021 08 15.
Artículo en Inglés | MEDLINE | ID: mdl-33819645

RESUMEN

In this study, water of the channels and ponds that conduct residual water in two most important cities of Saudi Arabia were assessed to ascertain the influence of the population on the occurrence and pollution characteristics of microplastics (MPs) (> 20 µm in size). Riyadh has 7.6 million inhabitants and is an urban city even though also have industry while Al-Jubail has only 0.78 and is the biggest industrial city. MPs showed an average of 3.2 items/L in Riyadh and 0.2 items/L in Al-Jubail showing a statistically significant difference between both cities. Sampling with a Turton Tow Net of 20 µm mesh, fibers were dominant in all sites (60%). MPs size was mainly distributed between 80 and 250 µm (60%), and their major colors were white (40%), red (25%) and blue (20%). Infrared spectral analysis revealed that most of the selected particles were identified as MPs of polypropylene and polyethylene (48.3%). The risk assessment was carried out using both the hazard index (HI) and the pollution load index (PLI). The results showed that, in this case, the decisive index is the PLI since the main difference in the MPs characteristics between the two cities is their concentration.


Asunto(s)
Microplásticos , Contaminantes Químicos del Agua , Ciudades , Monitoreo del Ambiente , Plásticos , Arabia Saudita , Aguas Residuales , Contaminantes Químicos del Agua/análisis , Contaminantes Químicos del Agua/toxicidad
18.
Sci Total Environ ; 776: 145843, 2021 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-33640550

RESUMEN

In this study, the occurrence of 12 organophosphorus flame retardants (OPFRs), 64 pesticides, 21 perfluoroalkyl substances (PFASs) and 34 pharmaceuticals and personal care products (PPCPs) in surface water, sediments and vegetation collected from seven locations along the South Riyadh and six locations along the Al-Jubail industrial city (Saudi Arabia) were reported. The median of the concentrations of Æ©OPFRs, Æ©Pesticides, Æ©PFASs and Æ©PPCPs in water was 297, 231, 29.7 and 3794 ng L-1, respectively, in sediments 56.2, 40.4, 5.66 and 419 ng g-1 d.w., in crops for human consumption of 45.6, 42.0, 0.46 and 42.0 ng g-1, in farm crops of 13.4, 57.5, 3.2 and 637 ng g-1, and in natural vegetation of 51.7, 10.3, 1.88 and 1580 ng g-1. Predominant compounds in all matrices were tris-(1,3-dichloro-2-propyl)phosphate (TClPP), acetamiprid, imidacloprid, caffeine, bisphenol A (BPA), diclofenac and ibuprofen. Tris(2-butoxyethyl) phosphate (TBEP), tris-(2-ethylhexyl)phosphate (TPhP), perfluoroctanoic acid (PFOA), perfluoroalkyl sulfonate (PFOS) and paracetamol were also in many samples but at low concentrations. The contaminants' levels showed similar values in both cities. However, pesticide levels were significantly higher in surface water (p < 0.05) and lower in natural vegetation (p < 0.05) of Riyadh than those of Al-Jubail. The risk assessment for the aquatic biota showed that abamectin, diazinon (pesticides), bisphenol A and caffeine (PPCPs) had the highest risk levels. The cumulative risk assessment showed that the contaminant mixture in all water samples is of concern. As far as the risk to human health is concerned, individual contaminants did not show a significant hazard for the population. However, OPFRs and pesticide requires a closed monitoring since % of admissible daily intakes (ADIs) or reference doses (RfD) are high. This is one of the most comprehensive study covering environmental and human risk assessment of emerging contaminants carried out in Saudi Arabia.


Asunto(s)
Retardadores de Llama , Fluorocarburos , Plaguicidas , Preparaciones Farmacéuticas , Monitoreo del Ambiente , Retardadores de Llama/análisis , Humanos , Compuestos Organofosforados/análisis , Plaguicidas/análisis , Medición de Riesgo , Arabia Saudita , Verduras
19.
Saudi J Biol Sci ; 28(1): 333-341, 2021 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-33424314

RESUMEN

Food producing animals harbouring bacteria carrying drug resistance genes especially the metallo-beta-lactamase (MBL) pose high risk for the human population. In addition, formation of biofilm by these drug resistant pathogens represents major threat to food safety and public health. In this study, metallo-ß-lactamases (MßLs) producing Pseudomonas spp. from camel meat were isolated and assessed for their biofilm formation. Further, in vitro and in silico studies were performed to study the effect of flavone naringin on biofilm formation against isolated Pseudomonas spp. A total of 55% isolates were found to produce metallo-ß-lactamase enzyme. Naringin mitigated biofilm formation of Pseudomonas isolates up to 57%. Disturbed biofilm architecture and reduced the colonization of bacteria on glass was observed under scanning electron microscope (SEM) and confocal laser scanning microscope (CLSM). The biofilm related traits such as exopolysaccharides (EPS) and alginate production was also reduced remarkably in the presence of naringin. Eradication of preformed biofilms (32-60%) was also observed at the respective 0.50 × MICs. Molecular docking revealed that naringin showed strong affinity towards docked proteins with binding energy ranging from -8.6 to -8.8 kcal mol-1. Presence of metallo-ß-lactamase producers indicates that camel meat could be possible reservoir of drug-resistant Pseudomonas species of clinical importance. Naringin was successful in inhibiting biofilm formation as well as eradicating the preformed biofilms and demonstrated strong binding affinity towards biofilm associated protein. Thus, it is envisaged that naringin could be exploited as food preservative especially against the biofilm forming food-borne Pseudomonas species and is a promising prospect for the treatment of biofilm based infections.

20.
Sci Total Environ ; 782: 146887, 2021 Aug 15.
Artículo en Inglés | MEDLINE | ID: mdl-33848852

RESUMEN

The principal objective of this study is to generate mathematical regression equations that facilitate the estimation of the extent to which Eichhornia crassipes (C. Mart.) Solms, water hyacinth, absorbs heavy metals (HMs) into four plant organs (laminae, petioles, roots, and stolons). This study considers the absorption of nine HMs (Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, and Zn), and the E. crassipes evaluated in this study were located in three irrigation canals in the North Nile Delta in Egypt, with sampling being conducted in both monospecific and homogenous E. crassipes. Samples of both E. crassipes and water were collected on a monthly basis during one growing season. Analysis of the water samples showed that the HM concentrations ranged from 1.1 µg/l for Cd to 2079.8 µg/l for Fe. All HMs were more concentrated in the E. crassipes roots than in any other organ. Typically, there was a significant correlation between the HM levels in the water and the HM levels in the E. crassipes organs. E. crassipes was documented by a bioconcentration factor > 1.0 for all HMs. The translocation factor in this study was <1.0 for all HMs. The t-values that referred to the discrepancies between the measured and predicted values of the HMs in the four E. crassipes organs were not significant. This finding can be considered to be an indication of the goodness of fit with respect to the ability of the equations to forecast HM uptake. Therefore, the developed equations will benefit the prediction of HM uptake by E. crassipes grown in irrigation canals in the Nile Delta. The efficacy of E. crassipes as a metric for gauging the aggregate impact of environmental pollution in water sources and its potential application in biomonitoring are confirmed in this study.


Asunto(s)
Eichhornia , Metales Pesados , Contaminantes Químicos del Agua , Biodegradación Ambiental , Monitoreo Biológico , Egipto , Metales Pesados/análisis , Contaminantes Químicos del Agua/análisis
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