Sperm-specific glycogen synthase kinase 3 is required for sperm motility and the post-fertilization signal for female meiosis II in Caenorhabditis elegans.

In most sexually reproducing animals, sperm entry provides the signal to initiate the final stages of female meiosis. In Caenorhabditis elegans, this signal is required for completion of female anaphase I and entry into meiosis II (MII). memi-1/2/3 (meiosis-to-mitosis) encode maternal components that facilitate this process; memi-1/2/3(RNAi) results in a skipped-MII phenotype. Previously, we used a gain-of-function mutation, memi-1(sb41), to identify genetic suppressors that represent candidates for the sperm-delivered signal. Herein, we characterize two suppressors of memi-1(sb41): gskl-1 and gskl-2. Both genes encode functionally redundant sperm glycogen synthase kinase, type 3 (GSK3) protein kinases. Loss of both genes causes defects in male spermatogenesis, sperm pseudopod treadmilling and paternal-effect embryonic lethality. The two kinases locate within the pseudopod of activated sperm, suggesting that they directly or indirectly regulate the sperm cytoskeletal polymer major sperm protein (MSP). The GSK3 genes genetically interact with another memi-1(sb41) suppressor, gsp-4, which encodes a sperm-specific PP1 phosphatase, previously proposed to regulate MSP dynamics. Moreover, gskl-2 gsp-4; gskl-1 triple mutants often skip female MII, similar to memi-1/2/3(RNAi). The GSK3 kinases and PP1 phosphatases perform similar sperm-related functions and work together for post-fertilization functions in the oocyte that involve MEMI.

Electrochromic and Energy Storage Performance Enhancement by Introducing Jahn-Teller Distortion: Experimental and Theoretical Study.

Aqueous electrochromic batteries (ECBs) have recently garnered significant attention within the realm of renewable rechargeable technology due to their potential applicability in diverse multifunctional devices featuring visible-level indicator batteries. However, there exists an imperative to comprehend the underlying structural factors that contribute to achieving an elevated electrochemical performance. In this context, we have synthesized and compared WO3·H2O (HWO) specifically for heightened ECB application as against the performance of a standard anhydrous WO3 (AWO). To unravel the underlying cause, a density functional theory (DFT) investigation is carried out, disclosing a structural deformation of HWO, unlike AWO, due to Jahn-Teller distortion induced by the presence of interlayer water. It results in a fully compatible HWO ion host to devise a zinc-ion aqueous electrolyte electrochromic battery, exhibiting superior redox reactivity, optical modulation (50%), capacity (200 mAh/m2), and cyclic stability. To glean insights into the dynamic structural alterations during the intercalation and deintercalation processes of Zn2+, ex situ X-ray diffraction and Raman spectroscopic studies are carried out. These investigations culminate in the determination that HWO films are better suited for the application than their AWO counterparts. This finding holds promise for advancing the applications of ECBs and represents a significant step forward in this field.

De Novo Hybrid Assembled Draft Genome of Commiphora wightii (Arnott) Bhandari Reveals Key Enzymes Involved in Phytosterol Biosynthesis.

Genome sequence and identification of specific genes involved in the targeted secondary metabolite biosynthesis are two essential requirements for the improvement of any medicinal plant. Commiphora wightii (Arnott) Bhandari (family: Burseraceae), a medicinal plant native to Western India, produces a phytosterol guggulsterone, which is useful for treating atherosclerosis, arthritis, high cholesterol, acne, and obesity. For enhanced guggulsterone yield, key genes involved in its biosynthesis pathway need to be predicted, for which the genome sequence of the species is a pre-requisite. Therefore, we assembled the first-ever hybrid draft genome of C. wightii with a genome size of 1.03 Gb and 107,221 contigs using Illumina and PacBio platforms. The N50 and L50 values in this assembled genome were ~74 Kb and 3486 bp, respectively with a guanine-cytosine (GC) content of 35.6% and 98.7%. The Benchmarking Universal Single Copy Ortholog (BUSCO) value indicated good integrity of assembly. Analysis predicted the presence of 31,187 genes and 342.35 Mb repeat elements in the genome. The comparative genome analysis of C. wightii with relevant orthogroups predicted a few key genes associated with phytosterol biosynthesis and secondary metabolism pathways. The assembled draft genome and the predicted genes should help the future variety development program with improved guggulsterone contents in C. wightii.

Chloroplast Genome of Lithocarpus dealbatus (Hook.f. & Thomson ex Miq.) Rehder Establishes Monophyletic Origin of the Species and Reveals Mutational Hotspots with Taxon Delimitation Potential

There is phylogenetic ambiguity in the genus Lithocarpus and subfamily Quercoideae (Family: Fagaceae). Lithocarpus dealbatus, an ecologically important tree, is the dominant species among the Quercoideae in India. Although several studies have been conducted on the species' regeneration and ecological and economic significance, limited information is available on its phylo-genomics. To resolve the phylogeny in Quercoideae, we sequenced and assembled the 161,476 bp chloroplast genome of L. dealbatus, which has a large single-copy section of 90,732 bp and a small single-copy region of 18,987 bp, separated by a pair of inverted repeat regions of 25,879 bp. The chloroplast genome contained 133 genes, of which 86 were protein-coding genes, 39 were transfer RNAs, and eight were ribosomal RNAs. Analysis of repeat elements and RNA editing sites revealed interspecific similarities within the Lithocarpus genus. DNA diversity analysis identified five highly diverged coding and noncoding hotspot regions in the four genera, which can be used as polymorphic markers for species/taxon delimitation across the four genera of Quercoideae viz., Lithocarpus, Quercus, Castanea, and Castanopsis. The chloroplast-based phylogenetic analysis among the Quercoideae established a monophyletic origin of Lithocarpus, and a closer evolutionary lineage with a few Quercus species. Besides providing insights into the chloroplast genome architecture of L. dealbatus, the study identified five mutational hotspots having high taxon-delimitation potential across four genera of Quercoideae.

Valence-band electronic structure of iron phthalocyanine: an experimental and theoretical photoelectron spectroscopy study.

The electronic structure of iron phthalocyanine (FePc) in the valence region was examined within a joint theoretical-experimental collaboration. Particular emphasis was placed on the determination of the energy position of the Fe 3d levels in proximity of the highest occupied molecular orbital (HOMO). Photoelectron spectroscopy (PES) measurements were performed on FePc in gas phase at several photon energies in the interval between 21 and 150 eV. Significant variations of the relative intensities were observed, indicating a different elemental and atomic orbital composition of the highest lying spectral features. The electronic structure of a single FePc molecule was first computed by quantum chemical calculations by means of density functional theory (DFT). The hybrid Becke 3-parameter, Lee, Yang and Parr (B3LYP) functional and the semilocal 1996 functional of Perdew, Burke and Ernzerhof (PBE) of the generalized gradient approximation (GGA-)type, exchange-correlation functionals were used. The DFT/B3LYP calculations find that the HOMO is a doubly occupied π-type orbital formed by the carbon 2p electrons, and the HOMO-1 is a mixing of carbon 2p and iron 3d electrons. In contrast, the DFT/PBE calculations find an iron 3d contribution in the HOMO. The experimental photoelectron spectra of the valence band taken at different energies were simulated by means of the Gelius model, taking into account the atomic subshell photoionization cross sections. Moreover, calculations of the electronic structure of FePc using the GGA+U method were performed, where the strong correlations of the Fe 3d electronic states were incorporated through the Hubbard model. Through a comparison with our quantum chemical calculations we find that the best agreement with the experimental results is obtained for a U(eff) value of 5 eV.

Will there be a third COVID-19 wave? A SVEIRD model-based study of India's situation.

Since the first patient was detected in India in late February 2020, the SARS-CoV-II virus is playing havoc on India. After the first wave, India is now riding the second wave. As was in the case of European countries like Italy and the UK, the second wave is more contagious and at the time of writing this paper, the per day infection is as high as 400,000. The alarming thing is it is not uncommon that people are getting infected multiple times. On the other hand, mass vaccination has started step by step. There is also a growing danger of potential third wave is unavoidable, which can even infect kids and minors. In this situation, an estimation of the dynamics of SARS-CoV-II is necessary to combat the pandemic. We have used a modified SEIRD model that includes vaccination and repeat infection as well. We have studied India and 8 Indian states with varying SARS-CoV-II infections. We have shown that the COVID-19  wave will be repeated from time to time, but the intensity will slow down with time. In the most possible situation, our calculation shows COVID-19 will remain endemic for the foreseeable future unless we can increase our vaccination rate manifold.

Combinatorial Design and Computational Screening of Two-Dimensional Transition Metal Trichalcogenide Monolayers: Toward Efficient Catalysts for Hydrogen Evolution Reaction.

Recent experiments showed that some layered ternary transition metal trichalcogenide compounds are efficient catalysts for the hydrogen evolution reaction (HER). Motivated by these, we have combinatorially designed and computationally screened, through an efficient, automated approach based on density functional theory, single layers of such compounds, including those not reported in widely used crystal structure database like the International Crystal Structure Database (ICSD), for their efficiency as HER catalysts. On the basis of our theoretical prediction of overpotentials determined from the reaction coordinate mapping corresponding to the HER mechanism, 13 of these compounds are found to be promising catalysts, out of which three are suggested to be as efficient as platinum, the best known HER catalyst to date.

New quaternary half-metallic ferromagnets with large Curie temperatures.

New magnetic materials with high Curie temperatures for spintronic applications are perpetually sought for. In this paper, we present an ab initio study of the structural, electronic and magnetic properties of Quaternary Heusler compounds CoX'Y'Si where X' is a transition metal with 4d electrons and Y' is either Fe or Mn. We find five new half-metallic ferromagnets with spin polarisation nearly 100% with very high Curie temperatures. The variation of Curie temperatures as a function of valence electrons can be understood from the calculated inter-atomic exchange interaction parameters. We also identify a few other compounds, which could be potential half-metals with suitable application of pressure or with controlled doping. Our results reveal that the half-metallicity in these compounds is intricately related to the arrangements of the magnetic atoms in the Heusler lattice and hence, the interatomic exchange interactions between the moments. The trends in the atomic arrangements, total and local magnetic moments, interatomic magnetic exchange interactions and Curie temperatures are discussed with fundamental insights.

A study of magnetism in disordered Pt-Mn, Pd-Mn and Ni-Mn alloys: an augmented space recursion approach.

In this paper we shall study three binary alloy systems, one constituent of which is Mn. The other constituents are chosen from a particular column of the periodic table: Ni(3d), Pt (4d) and Pd (5d). As we go down the column, the d-bands become wider, discouraging spin-polarization. In a disordered alloy, the situation becomes more complicated, as the exchange interaction between two atoms is environment dependent. We shall compare and contrast their magnetic behaviour using robust electronic structure techniques. In all three alloy systems conjectures are made to explain experimental data. In this paper we shall examine whether there is any basis to these conjectures.

Fe(3.3)Ni(83.2)Mo(13.5): a likely candidate to show spin-glass behaviour at low temperatures.

Unlike other transition metals alloyed with a non-magnetic metal, alloys of Ni behave rather differently. This is because of the fragility of the local magnetic moment on Ni. NiMo and NiW do not show any spin-glass phase. However, addition of Fe can bolster the moment on Ni. We wish to study whether the alloy Fe(3.3)Ni(83.2)Mo(13.5), chosen near a composition where mean-field estimates suggest there could be a spin-glass phase, shows such a phase or not.