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1.
BMC Genomics ; 25(1): 500, 2024 May 21.
Artículo en Inglés | MEDLINE | ID: mdl-38773374

RESUMEN

BACKGROUND: The ricefield eel Monopterus albus undergoes a natural sex change from female to male during its life cycle, and previous studies have shown the potential mechanisms of this transition at the transcriptional and protein levels. However, the changes in protein levels have not been fully explored, especially in the intersexual stage. RESULTS: In the present study, the protein expression patterns in the gonadal tissues from five different periods, the ovary (OV), early intersexual stage gonad (IE), middle intersexual stage gonad (IM), late intersexual stage gonad (IL), and testis (TE), were determined by untargeted proteomics sequencing. A total of 5125 proteins and 394 differentially expressed proteins (DEPs) were detected in the gonadal tissues. Of the 394 DEPs, there were 136 between the OV and IE groups, 20 between the IM and IE groups, 179 between the IL and IM groups, and 59 between the TE and IL groups. Three candidate proteins, insulin-like growth factor 2 mRNA-binding protein 3 isoform X1 (Igf2bp3), triosephosphate isomerase (Tpi), and Cu-Zn superoxide dismutase isoform X1 [(Cu-Zn) Sod1], were validated by western blotting to verify the reliability of the data. Furthermore, metal metabolite-related proteins were enriched in the IL vs. IM groups and TE vs. IL groups, which had close relationships with sex change, including Cu2+-, Ca2+-, Zn2+- and Fe2+/Fe3+-related proteins. Analysis of the combined transcriptome data revealed consistent protein/mRNA expression trends for two metal metabolite-related proteins/genes [LOC109953912 and calcium Binding Protein 39 Like (cab39l)]. Notably, we detected significantly higher levels of Cu2+ during the sex change process, suggesting that Cu2+ is a male-related metal metabolite that may have an important function in male reproductive development. CONCLUSIONS: In summary, we analyzed the protein profiles of ricefield eel gonadal tissues in five sexual stages (OV, IE, IM, IL, and TE) and verified the plausibility of the data. After preforming the functional enrichment of metal metabolite-related DEPs, we detected the contents of the metal metabolites Zn2+, Cu2+, Ca2+, and Fe2+/Fe3+ at these five stages and screened for (Cu-Zn) Sod1 and Mmp-9 as possible key proteins in the sex reversal process.


Asunto(s)
Metales , Animales , Masculino , Femenino , Metales/metabolismo , Anguilas/metabolismo , Anguilas/genética , Proteómica , Proteínas de Peces/metabolismo , Proteínas de Peces/genética , Smegmamorpha/metabolismo , Smegmamorpha/genética , Organismos Hermafroditas/metabolismo , Organismos Hermafroditas/genética , Perfilación de la Expresión Génica , Testículo/metabolismo
2.
BMC Genomics ; 25(1): 145, 2024 Feb 06.
Artículo en Inglés | MEDLINE | ID: mdl-38321406

RESUMEN

BACKGROUND: Schizothorax o'connori is an endemic fish distributed in the upper and lower reaches of the Yarlung Zangbo River in China. It has experienced a fourth round of whole gene replication events and is a good model for exploring the genetic differentiation and environmental adaptability of fish in the Qinghai-Tibet Plateau. The uplift of the Qinghai-Tibet Plateau has led to changes in the river system, thereby affecting gene exchange and population differentiation between fish populations. With the release of fish whole genome data, whole genome resequencing has been widely used in genetic evolutionary analysis and screening of selected genes in fish, which can better elucidate the genetic basis and molecular environmental adaptation mechanisms of fish. Therefore, our purpose of this study was to understand the population structure and adaptive characteristics of S. o'connori using the whole-genome resequencing method. RESULTS: The results showed that 23,602,746 SNPs were identified from seven populations, mostly distributed on chromosomes 2 and 23. There was no significant genetic differentiation between the populations, and the genetic diversity was relatively low. However, the Zangga population could be separated from the Bomi, Linzhi, and Milin populations in the cluster analysis. Based on historical dynamics analysis of the population, the size of the ancestral population of S. o'connori was affected by the late accelerated uplift of the Qinghai Tibet Plateau and the Fourth Glacial Age. The selected sites were mostly enriched in pathways related to DNA repair and energy metabolism. CONCLUSION: Overall, the whole-genome resequencing analysis provides valuable insights into the population structure and adaptive characteristics of S. o'connori. There was no obvious genetic differentiation at the genome level between the S. o'connori populations upstream and downstream of the Yarlung Zangbo River. The current distribution pattern and genetic diversity are influenced by the late accelerated uplift of the Qinghai Tibet Plateau and the Fourth Ice Age. The selected sites of S. o'connori are enriched in the energy metabolism and DNA repair pathways to adapt to the low temperature and strong ultraviolet radiation environment at high altitude.


Asunto(s)
Cyprinidae , Rayos Ultravioleta , Animales , Tibet , China , Cyprinidae/genética , Análisis de Secuencia de ADN
3.
Eur J Immunol ; 53(9): e2350374, 2023 09.
Artículo en Inglés | MEDLINE | ID: mdl-37417726

RESUMEN

Atopic dermatitis (AD) is a common inflammatory skin disorder. Mast cells play an important role in AD because they regulate allergic reactions and inflammatory responses. However, whether and how the modulation of mast cell activity affects AD has not been determined. In this study, we aimed to determine the effects and mechanisms of 3-O-cyclohexanecarbonyl-11-keto-ß-boswellic acid (CKBA). This natural compound derivative alleviates skin inflammation by inhibiting mast cell activation and maintaining skin barrier homeostasis in AD. CKBA markedly reduced serum IgE levels and alleviated skin inflammation in calcipotriol (MC903)-induced AD mouse model. CKBA also restrained mast cell degranulation both in vitro and in vivo. RNA-seq analysis revealed that CKBA downregulated the extracellular signal-regulated kinase (ERK) signaling in BM-derived mast cells activated by anti-2,4-dinitrophenol/2,4-dinitrophenol-human serum albumin. We proved that CKBA suppressed mast cell activation via ERK signaling using the ERK activator (t-butyl hydroquinone) and inhibitor (selumetinib; AZD6244) in AD. Thus, CKBA suppressed mast cell activation in AD via the ERK signaling pathway and could be a therapeutic candidate drug for AD.


Asunto(s)
Dermatitis Atópica , Ratones , Humanos , Animales , Dermatitis Atópica/tratamiento farmacológico , Mastocitos/metabolismo , Quinasas MAP Reguladas por Señal Extracelular/metabolismo , Inmunoglobulina E/metabolismo , Transducción de Señal , Inflamación/metabolismo , Dinitrofenoles/metabolismo , Dinitrofenoles/farmacología , Dinitrofenoles/uso terapéutico , Citocinas/metabolismo
4.
Int J Mol Sci ; 24(18)2023 Sep 05.
Artículo en Inglés | MEDLINE | ID: mdl-37762014

RESUMEN

Forkhead box H1 (FoxH1) is a sexually dimorphic gene in Oreochromis niloticus, Oplegnathus fasciatus, and Acanthopagrus latus, indicating that it is essential for gonadal development. In the present study, the molecular characteristics and potential function of FoxH1 and the activation of the cyp19a1a promoter in vitro were evaluated in Monopterus albus. The levels of foxh1 in the ovaries were three times higher than those in the testes and were regulated by gonadotropins (Follicle-Stimulating Hormone and Human Chorionic Gonadotropin). FoxH1 colocalized with Cyp19a1a in the oocytes and granulosa cells of middle and late vitellogenic follicles. In addition, three FoxH1 binding sites were identified in the proximal promoter of cyp19a1a, namely, FH1 (-871/-860), FH2 (-535/-524), and FH3 (-218/-207). FoxH1 overexpression significantly attenuated the activity of the cyp19a1a promoter in CHO cells, and FH1/2 mutation increased promoter activity. Taken together, these results suggest that FoxH1 may act as an important regulator in the ovarian development of M. albus by repressing cyp19a1a promoter activity, which provides a foundation for the study of FoxH1 function in bony fish reproductive processes.


Asunto(s)
Aromatasa , Factores de Transcripción Forkhead , Smegmamorpha , Animales , Cricetinae , Femenino , Sitios de Unión , Cricetulus , Anguilas/genética , Ovario , Smegmamorpha/genética , Factores de Transcripción Forkhead/genética , Aromatasa/genética , Regiones Promotoras Genéticas
5.
Cereb Cortex ; 26(1): 23-31, 2016 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-25085882

RESUMEN

Whether vascular distribution is spatially specific among cortical columns is a fundamental yet controversial question. Here, we have obtained 1-µm resolution 3D datasets that cover the whole mouse barrel cortex by combining Nissl staining with micro-optical sectioning tomography to simultaneously visualize individual cells and blood vessels, including capillaries. Pinpointing layer IV of the posteromedial barrel subfield, direct 3D reconstruction and quantitative analysis showed that (1) penetrating vessels preferentially locate in the interbarrel septa/barrel wall (75.1%) rather than the barrel hollows, (2) the branches of 70% penetrating vessels only reach the neighboring but not always all the neighboring barrels and the other 30% extend beyond the neighboring barrels and may provide cross-barrel blood supply or drainage, (3) the branches of 59.6% penetrating vessels reach all the neighboring barrels, while the rest only reach part of them, and (4) the length density of microvessels in the interbarrel septa/barrel wall is lower than that in the barrel hollows with a ratio of 0.92. These results reveal that the penetrating vessels and microvessels exhibit a barrel-specific organization, whereas the branches of penetrating vessels do not, which suggests a much more complex vascular distribution pattern among cortical columns than previously thought.


Asunto(s)
Encéfalo/anatomía & histología , Procesamiento de Imagen Asistido por Computador , Red Nerviosa/anatomía & histología , Neuronas/fisiología , Corteza Somatosensorial/fisiología , Vibrisas/inervación , Animales , Procesamiento de Imagen Asistido por Computador/métodos , Masculino , Ratones Endogámicos C57BL , Modelos Animales
6.
J Synchrotron Radiat ; 22(6): 1396-402, 2015 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-26524304

RESUMEN

Fabrication and testing of a prototype transmission-mode pixelated diamond X-ray detector (pitch size 60-100 µm), designed to simultaneously measure the flux, position and morphology of an X-ray beam in real time, are described. The pixel density is achieved by lithographically patterning vertical stripes on the front and horizontal stripes on the back of an electronic-grade chemical vapor deposition single-crystal diamond. The bias is rotated through the back horizontal stripes and the current is read out on the front vertical stripes at a rate of ∼ 1 kHz, which leads to an image sampling rate of ∼ 30 Hz. This novel signal readout scheme was tested at beamline X28C at the National Synchrotron Light Source (white beam, 5-15 keV) and at beamline G3 at the Cornell High Energy Synchrotron Source (monochromatic beam, 11.3 keV) with incident beam flux ranges from 1.8 × 10(-2) to 90 W mm(-2). Test results show that the novel detector provides precise beam position (positional noise within 1%) and morphology information (error within 2%), with an additional software-controlled single channel mode providing accurate flux measurement (fluctuation within 1%).


Asunto(s)
Diamante/química , Diamante/efectos de la radiación , Radiometría/instrumentación , Procesamiento de Señales Asistido por Computador/instrumentación , Transductores , Difracción de Rayos X/instrumentación , Relación Dosis-Respuesta en la Radiación , Diseño de Equipo , Análisis de Falla de Equipo , Dosis de Radiación , Reproducibilidad de los Resultados , Sensibilidad y Especificidad
7.
Mol Biol Rep ; 41(4): 2671-7, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-24469719

RESUMEN

Tetralogy of Fallot (TOF) and double outlet right ventricle (DORV) are two common subtypes of conotruncal defects. Recent reports have implicated mutations in the zinc finger protein, FOG family member 2 (ZFPM2/FOG2) as a cause of TOF/DORV, but no current literature focuses on the relationship between ZFPM2/FOG2 gene and non-syndromic TOF and DORV in Chinese Han population. The purpose of this study was to estimate the occurrence and the prevalence of ZFPM2/FOG2 genetic variants in Chinese Han population with non-syndromic TOF and DORV and to investigate genotype-phenotype correlations in individuals with ZFPM2/FOG2 mutations. The whole exons of ZFPM2/FOG2 were sequenced in 98 non-syndromic TOF/DORV patients and 200 control subjects. All the six variants (G2482A, G1552A, A2107C, C452T, C3239T, C1208G) changed the amino acid (p.Val828Met, p.Ala518Thr, p.Met703Leu, p.Thr151Ile, p.Ser1080Phe, p.Ala403Gly), in which four variants (G2482A, C452T, G1552A, C3239T) were not reported before and absent in control subjects. Further analysis revealed that only occurrences of variants G2482A and A2107C had statistical significance compared to the control group (P < 0.05). In conclusion, our results provide strong evidence regarding the susceptibility of the ZFPM2 gene to the development of non-syndromic TOF/DORV. It suggests that ZFPM2/FOG2 genetic variants may be a novel potential bio-markers and treatment targets for the non-syndromic TOF and DORV.


Asunto(s)
Proteínas de Unión al ADN/genética , Ventrículo Derecho con Doble Salida/genética , Variación Genética , Tetralogía de Fallot/genética , Factores de Transcripción/genética , Alelos , Secuencia de Aminoácidos , Sustitución de Aminoácidos , Estudios de Casos y Controles , Niño , Preescolar , Análisis Mutacional de ADN , Exones , Femenino , Orden Génico , Ligamiento Genético , Genotipo , Humanos , Lactante , Masculino , Datos de Secuencia Molecular , Polimorfismo de Nucleótido Simple
8.
Zhonghua Wai Ke Za Zhi ; 52(2): 127-30, 2014 Feb.
Artículo en Zh | MEDLINE | ID: mdl-24809522

RESUMEN

OBJECTIVE: To retrospectively analyze the experience of one-stage surgical correction for children with congenital heart diseases and tracheal stenosis and further to clear the principle of treatment for these patients. METHODS: From January 2006 to June 2013, 48 patients with congenital heart diseases and tracheal stenosis underwent surgical correction. There were 36 male and 12 female patients. The mean age at operation was (23 ± 27)months (range: 3-72 months) and the mean weight was (12 ± 8) kg (range: 3.4-46.0 kg). The underlying diagnoses were pulmonary sling in 33 patients, double aortic arch in 3, tetrology of Fallot in 6, ventricular septal defect in 4, double outlet right ventricle in 1, and pulmonary atresia in 1 patient. Among them, short tracheal stenosis was present in 15, long tracheal stenosis in 25 and bridging bronchus in 8 patients. Repairs with autogenous tracheal tissue were performed in 6, and end-to-end anastomosis in 11 and slide tracheoplasty in 31 patients. Two patients had granulation tissue growing in the airway postoperatively and were re-operated by autogenous rib tissue. All of patients were followed up after operation 1, 3, 6, 12 months and if the patient had symptoms that should be examined by bronchoscopy. The patients should be examined by CT post-operation one year. RESULTS: There were 7 deaths in all 48 cases and the early mortality was 14.6%. Two deaths were not related to tracheal stenosis, and other 5 were associated with long segment tracheal stenosis. Forty-one patients were followed for 2 months to 6 years, and no patients required re-operations. Clinical symptoms of tracheal stenosis disappeared and the results of CT scan were satisfied. CONCLUSIONS: One stage surgical repair of the patients with congenital heart diseases and tracheal stenosis have a good effect. Slide tracheoplasty is the effective surgical method for long segment tracheal stenosis. Postoperative granulation tissue growing in the airway is the leading cause of death.


Asunto(s)
Cardiopatías Congénitas/cirugía , Estenosis Traqueal/cirugía , Niño , Preescolar , Femenino , Cardiopatías Congénitas/complicaciones , Humanos , Lactante , Masculino , Estudios Retrospectivos , Estenosis Traqueal/complicaciones
9.
Med Phys ; 2024 Jun 03.
Artículo en Inglés | MEDLINE | ID: mdl-38828883

RESUMEN

BACKGROUND: The back-projection strategies such as confidence weighting (CW) and most likely annihilation position (MLAP) have been adopted into back-projection-and-filtering-like (BPF-like) deep reconstruction model and shown great potential on fast and accurate PET reconstruction. Although the two methods degenerate to an identical model at the time resolution of 0 ps, they represent two distinct approaches at the realistic time resolutions of current commercial systems. There is a lack of a systematic and fair assessment on these differences. PURPOSE: This work aims to analyze the impact of back-projection variants on CNN-based PET image reconstruction to find the most effective back-projection model, and ultimately contribute to accurate PET reconstruction. METHODS: Different back-projection strategies (CW and MLAP) and different angular view processing methods (view-summed and view-grouped) were considered, leading to the comparison of four back-projection variants integrated with the same CNN filtration model. Meanwhile, we investigated two strategies of physical effect compensation, either introducing pre-corrected data as the input or adding a channel of attenuation map to the CNN model. After training models separately on Monte-Carlo-simulated BrainWeb phantoms with full dose (events = 3×107), we tested them on both simulated phantoms and clinical brain scans with two dosage levels. For the performance assessment, peak signal-to-noise ratio (PSNR) and root mean square error (RMSE) were used to evaluate the pixel-wise error, structural similarity index (SSIM) to evaluate the structural similarity, and contrast recovery coefficient (CRC) in manually selected ROI to compare the region recovery. RESULTS: Compared to two MLAP-based histo-image reconstruction models, two CW-based back-projected image methods produced clearer, sharper, and more detailed images, from both simulated and clinical data. For angular view processing methods, view-grouped histo-image improved image quality, while view-grouped cwbp-image showed no advantage except for contrast recovery. Quantitative analysis on simulated data demonstrated that the view-summed cwbp-image model achieved the best PSNR, RMSE, SSIM, while the 8-view cwbp-image model achieved the best CRC in lesions and the white matter. Additionally, the multi-channel input model including the back-projection image and attenuation map was proved to be the most efficient and simplest method for compensating for physical effects for brain data. Applying Gaussian blur to the histo-image yielded images with limited improvement. All above results hold for both the half-dose and the full-dose cases. CONCLUSION: For brain imaging, the evaluation based on metrics PSNR, RMSE, SSIM, and CRC indicates that the view-summed CW-based back-projection variant is the most effective input for the BPF-like reconstruction model using CNN filtration, which can involve the attenuation map through an additional channel to effectively compensate for physical effects.

10.
Neuroimage ; 74: 87-98, 2013 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-23416252

RESUMEN

Revealing neural circuit mechanisms is critical for understanding brain functions. Significant progress in dissecting neural connections has been made using optical imaging with fluorescence labels, especially in dissecting local connections. However, acquiring and tracing brain-wide, long-distance neural circuits at the neurite level remains a substantial challenge. Here, we describe a whole-brain approach to systematically obtaining continuous neuronal pathways in a fluorescent protein transgenic mouse at a one-micron voxel resolution. This goal is achieved by combining a novel resin-embedding method for maintaining fluorescence, an automated fluorescence micro-optical sectioning tomography system for long-term stable imaging, and a digital reconstruction-registration-annotation pipeline for tracing the axonal pathways in the mouse brain. With the unprecedented ability to image a whole mouse brain at a one-micron voxel resolution, the long-distance pathways were traced minutely and without interruption for the first time. With advancing labeling techniques, our method is believed to open an avenue to exploring both local and long-distance neural circuits that are related to brain functions and brain diseases down to the neurite level.


Asunto(s)
Axones/ultraestructura , Mapeo Encefálico/métodos , Imagenología Tridimensional/métodos , Vías Nerviosas/ultraestructura , Tomografía Óptica/métodos , Animales , Encéfalo/ultraestructura , Procesamiento de Imagen Asistido por Computador , Ratones , Ratones Transgénicos
11.
Pediatr Cardiol ; 34(4): 795-801, 2013 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-23064875

RESUMEN

The arterial switch operation (ASO) remains a challenging procedure, especially in cases with a complicated coronary anatomy. In recent years, the autologous flap extension technique has been used for coronary implantation in complicated ASOs. Operative techniques and indications are discussed in this report. From January 2006 to June 2011, ASO with the autologous flap extension technique for coronary implantation was used for 21 patients, including five cases involving transposition of the great arteries (TGA) with an intact ventricular septum, eight cases involving TGA with a ventriculoseptal defect, five cases of Taussig-Bing anomaly, and three cases involving corrected TGA. Age at operation varied between 3 and 314 days (median, 110 days). Body weight varied between 3.1 and 14 kg (median, 5.4 kg). Three patients underwent a two-stage operation. In all the patients, the main trunk of the right coronary artery or the dilated right ventricular conus branch originated from the left- or right-facing sinus and followed an abnormal course of anterior looping to the aorta. The operative techniques included a long coronary button excised from the aorta and a pedicle flap on the pulmonary artery (neoaorta) cut as a cuff extended to the button of the coronary artery with equal distance. The side edges of the flap and the button were sutured to each other, thus forming an extension tube that lengthened the coronary artery. No in-hospital operative mortality occurred. Delayed sternum closure occurred in five cases. The average mechanical ventilator time was 101.6 h. The average intensive care unit stay was 9.5 days. Follow-up evaluation after discharge was complete in 17 cases. Growth and development were improved in all patients. No ischemic electrocardiographic changes occurred. One patient underwent reoperation for supravalvular pulmonary stenosis 2 years later. The autologous flap extension technique for coronary implantation in complicated ASOs can decrease hospital mortality due to abnormal coronary arteries, especially for patients undergoing two-stage ASOs or patients whose main trunk of the right coronary artery or dilated right ventricular conus branch originates from the left- or right-facing sinus and follows an abnormal course of anterior looping to the aorta.


Asunto(s)
Vasos Coronarios/cirugía , Ventrículo Derecho con Doble Salida/cirugía , Defectos del Tabique Interventricular/cirugía , Colgajos Quirúrgicos , Transposición de los Grandes Vasos/cirugía , Angiografía Coronaria , Ventrículo Derecho con Doble Salida/diagnóstico por imagen , Ecocardiografía , Femenino , Defectos del Tabique Interventricular/diagnóstico por imagen , Humanos , Lactante , Recién Nacido , Masculino , Estudios Retrospectivos , Tasa de Supervivencia , Técnicas de Sutura , Tomografía Computarizada por Rayos X , Transposición de los Grandes Vasos/diagnóstico por imagen , Resultado del Tratamiento
12.
IEEE Trans Med Imaging ; 42(10): 2842-2852, 2023 10.
Artículo en Inglés | MEDLINE | ID: mdl-37043322

RESUMEN

Dynamic PET imaging provides superior physiological information than conventional static PET imaging. However, the dynamic information is gained at the cost of a long scanning protocol; this limits the clinical application of dynamic PET imaging. We developed a modified Logan reference plot model to shorten the acquisition procedure in dynamic PET imaging by omitting the early-time information necessary for the conventional reference Logan model. The proposed model is accurate theoretically, but the straightforward approach raises the sampling problem in implementation and results in noisy parametric images. We then designed a self-supervised convolutional neural network to increase the noise performance of parametric imaging, with dynamic images of only a single subject for training. The proposed method was validated via simulated and real dynamic [Formula: see text]-fallypride PET data. Results showed that it accurately estimated the distribution volume ratio (DVR) in dynamic PET with a shortened scanning protocol, e.g., 20 minutes, where the estimations were comparable with those obtained from a standard dynamic PET study of 120 minutes of acquisition. Further comparisons illustrated that our method outperformed the shortened Logan model implemented with Gaussian filtering, regularization, BM4D and the 4D deep image prior methods in terms of the trade-off between bias and variance. Since the proposed method uses data acquired in a short period of time upon the equilibrium, it has the potential to add clinical values by providing both DVR and Standard Uptake Value (SUV) simultaneously. It thus promotes clinical applications of dynamic PET studies when neuronal receptor functions are studied.


Asunto(s)
Redes Neurales de la Computación , Tomografía de Emisión de Positrones , Tomografía de Emisión de Positrones/métodos
13.
Mar Pollut Bull ; 178: 113567, 2022 May.
Artículo en Inglés | MEDLINE | ID: mdl-35339060

RESUMEN

The East China Sea (ECS) is seriously impacted by harmful algal blooms (HABs). Therefore, early assessments of HAB risk in this area are extremely important. Using long-term historical HAB observation data and satellite-derived sea surface temperatures (SSTs), we found that the annual number of HAB events was positively correlated with the mean March SST and negatively correlated with the SST change rate from March to July in nearshore waters (< 50 m). A simple method of HAB risk assessment was therefore proposed based on either March SST (threshold: 13 °C) or SST change rate (threshold: 3.6 °C/month). Validation against a k-means classification scheme indicated that the overall accuracy based on the March SST threshold was 85%, with a kappa coefficient of 0.69. The SST-based method facilitates the assessment of HAB risk in the ECS 1-2 months in advance, thus helping to reduce the damage caused by HABs.


Asunto(s)
Floraciones de Algas Nocivas , China
14.
Artículo en Inglés | MEDLINE | ID: mdl-34727032

RESUMEN

This article deals with 2-D modeling of coupled vibrations of finite piezoelectric resonators. A general solution for all the physical quantities in the Cartesian and cylindrical coordinate systems is deduced from the governing equations by expansion in series summation of trigonometric functions of thickness coordinate and trigonometric or Bessel functions of the lateral one. The essential difference between this model and the earlier ones is that instead of expressing mainly in the thickness coordinate and integration through the thickness, the solutions are expressed in the form of double Fourier series augmented by single Fourier or Fourier-Bessel series, which contributes to better satisfy the mechanical and electrical boundary conditions. The dynamic stiffness matrix of the system is developed. Electrical impedances of a typical piezoelectric parallelepiped under stress-free and symmetrical loading conditions and its frequency spectrum for different width-to-thickness ratios are calculated using our model as well as by the finite element method. A comparison shows an excellent agreement. Finally, theoretical and measured electrical impedances of a piezoelectric parallelepiped and a piezoelectric disk are compared and discussed. The 2-D theoretical model proposed here is shown to be accurate and efficient for coupled vibration analysis of piezoelectric resonators and is applicable for any set of finite dimensions and crystal symmetry.

15.
Med Phys ; 49(4): 2531-2544, 2022 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-35122265

RESUMEN

PURPOSE: The time-of-flight (TOF) information improves signal-to-noise ratio (SNR) for positron emission tomography (PET) imaging. Existing analytical algorithms for TOF PET usually follow a filtered back-projection process on reconstructing images from the sinogram data. This work aims to develop a back-projection-and-filtering-like (BPF-like) algorithm that reconstructs the TOF PET image directly from listmode data rapidly. METHODS: We extended the 2D conventional non-TOF PET projection model to a TOF case, where projection data are represented as line integrals weighted by the one-dimensional TOF kernel along the projection direction. After deriving the central slice theorem and the TOF back-projection of listmode data, we designed a deep learning network with a modified U-net architecture to perform the spatial filtration (reconstruction filter). The proposed BP-Net method was validated via Monte Carlo simulations of TOF PET listmode data with three different time resolutions for two types of activity phantoms. The network was only trained on the simulated full-dose XCAT dataset and then evaluated on XCAT and Jaszczak data with different time resolutions and dose levels. RESULTS: Reconstructed images show that when compared with the conventional BPF algorithm and the MLEM algorithm proposed for TOF PET, the proposed BP-Net method obtains better image quality in terms of peak signal-to-noise ratio, relative mean square error, and structure similarity index; besides, the reconstruction speed of the BP-Net is 1.75 times faster than BPF and 29.05 times faster than MLEM using 15 iterations. The results also indicate that the performance of the BP-Net degrades with worse time resolutions and lower tracer doses, but degrades less than BPF or MLEM reconstructions. CONCLUSION: In this work, we developed an analytical-like reconstruction in the form of BPF with the reconstruction filtering operation performed via a deep network. The method runs even faster than the conventional BPF algorithm and provides accurate reconstructions from listmode data in TOF-PET, free of rebinning data to a sinogram.


Asunto(s)
Aprendizaje Profundo , Procesamiento de Imagen Asistido por Computador , Algoritmos , Procesamiento de Imagen Asistido por Computador/métodos , Fantasmas de Imagen , Tomografía de Emisión de Positrones/métodos , Relación Señal-Ruido
16.
IEEE Trans Med Imaging ; 41(2): 347-359, 2022 02.
Artículo en Inglés | MEDLINE | ID: mdl-34520350

RESUMEN

68Ga-DOTATATE PET-CT is routinely used for imaging neuroendocrine tumor (NET) somatostatin receptor subtype 2 (SSTR2) density in patients, and is complementary to FDG PET-CT for improving the accuracy of NET detection, characterization, grading, staging, and predicting/monitoring NET responses to treatment. Performing sequential 18F-FDG and 68Ga-DOTATATE PET scans would require 2 or more days and can delay patient care. To align temporal and spatial measurements of 18F-FDG and 68Ga-DOTATATE PET, and to reduce scan time and CT radiation exposure to patients, we propose a single-imaging session dual-tracer dynamic PET acquisition protocol in the study. A recurrent extreme gradient boosting (rXGBoost) machine learning algorithm was proposed to separate the mixed 18F-FDG and 68Ga-DOTATATE time activity curves (TACs) for the region of interest (ROI) based quantification with tracer kinetic modeling. A conventional parallel multi-tracer compartment modeling method was also implemented for reference. Single-scan dual-tracer dynamic PET was simulated from 12 NET patient studies with 18F-FDG and 68Ga-DOTATATE 45-min dynamic PET scans separately obtained within 2 days. Our experimental results suggested an 18F-FDG injection first followed by 68Ga-DOTATATE with a minimum 5 min delayed injection protocol for the separation of mixed 18F-FDG and 68Ga-DOTATATE TACs using rXGBoost algorithm followed by tracer kinetic modeling is highly feasible.


Asunto(s)
Fluorodesoxiglucosa F18 , Tomografía Computarizada por Tomografía de Emisión de Positrones , Radioisótopos de Galio , Humanos , Aprendizaje Automático , Tomografía de Emisión de Positrones , Cintigrafía
17.
Zhonghua Wai Ke Za Zhi ; 49(3): 227-31, 2011 Mar 01.
Artículo en Zh | MEDLINE | ID: mdl-21609566

RESUMEN

OBJECTIVE: To analyze the experience of treatment strategies for pediatric patients with primary cardiac tumors. METHODS: The clinical data of 27 patients with primary cardiac tumors which detected by echocardiography from May 1999 to May 2009 was analyzed retrospectively. There were 20 male and 7 female patients, aged from 24 d to 12.6 years. There were 59.2% less than 1 year old at the time of diagnosis. A single tumor were present in 22 cases and multiple in 5 cases. Surgery was performed for 22 patients due to the varied significant symptoms such as arrhythmia, pericardial effusion, swoon and congestive heart failure with dyspnoea. Five patients were discharged hospital without surgical treatment. The surgical approaches were adopted according to tumor location. Complete surgical resection was performed in 14 patients and partial resection in 8 patients. Seven patients were underwent valve reconstruction, 5 involving the mitral valve and 2 involving the tricuspid valve. RESULTS: Histologic examination of the surgically resected tumors showed rhabdomyomas in 8 cases, fibromas in 5 cases, hemangiomas 3 cases, myxomas in 4 cases, fibrosarcoma in 1 case and yolk sac sarcoma in 1 case. Sixteen cases revealed stable haemodynamic status postoperative. Two cases occurred apparent symptoms of low cardiac output and significant arrhythmias, finally recovery after comprehensive treatment of restoration the heart function. There was a total of 4 patients in-hospital death following surgery due to multiorgan system failure. Of the 18 patients who survived after the surgery were followed up from 1 to 10 years, echocardiography showed the residual mass of the tumor with partial resection, rhabdomyoma diminishing in 2 patients and almost vanishing in 1 patient. The residual mass of one fibrosarcoma patient and one hemangioma patient were not increased. Patients with myxomas had no recur or systemic embolisation after the initial surgery. Five nonsurgical patients were followed up from 1 to 3 years, 2 patients without haemodynamic alterations, 1 patients with giant tumor of left ventricular free wall was died of arrhythmia, the other one was alive; the patient of multiple cardiac tumor with low cardiac output was died of heart failure. CONCLUSIONS: Despite the benign histology of most paediatric primary cardiac tumours, there may be significant associated with morbidity and occasional mortality. Therapy strategies should be individualised: surgery is indicated in cases with significant clinical symptoms and close follow-up is necessary for asymptomatic patients. Total resection is not the only therapeutic aim. Most important is the restoration of the normal haemodynamic heart function.


Asunto(s)
Neoplasias Cardíacas/cirugía , Niño , Preescolar , Femenino , Estudios de Seguimiento , Neoplasias Cardíacas/diagnóstico , Humanos , Lactante , Recién Nacido , Masculino , Estudios Retrospectivos
18.
Artículo en Inglés | MEDLINE | ID: mdl-33373299

RESUMEN

The transducer is an essential part of all ultrasonic systems used for applications such as medical diagnostics, therapy, nondestructive evaluation, and cleaning because its health condition is vital to their proper operation. Defects within the active element, backing or other constitutive elements, and loss of adhesion between layers can significantly weaken the performance of a transducer. The objective of this work is to determine procedures to monitor the behavior of a single-element probe during its lifetime and detect degradations before they significantly affect the performance of the system. To achieve this, electromechanical admittance (EMA)-based method is envisaged numerically and experimentally. A simplified single-element transducer consisting of a piezoceramic disk, a bonding layer, and a backing is studied and the influence of bonding delamination on EMA is investigated. This study considers three different types of delaminations, which are named, respectively, "center" (circular delamination from the center of the disk toward the peripheric zone), "peripheric" (annular delamination from the peripheric zone toward the center), and "wedge" (wedge-shaped delamination with a given angle). For each case, a numerical model based on the finite-element (FE) method is developed: a 2-D FE analysis is implemented for the first two types of delaminations, taking advantage of their axisymmetric structure, and "wedge" delamination is modeled in 3-D. Then, transducers with different shapes of 3-D printed backings are mounted and experiments are conducted using an impedance analyzer. Finally, experimental results are found to be in good agreement with numerical solutions and it shows that changes in EMA can particularly reveal the occurrence and extent of delamination in an ultrasound probe.


Asunto(s)
Transductores , Impedancia Eléctrica , Diseño de Equipo , Análisis de Elementos Finitos , Ultrasonografía
19.
Ultrasonics ; 115: 106474, 2021 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-34082322

RESUMEN

The radial and thickness extensional vibration modes in piezoelectric cylinders are always inevitably coupled due to the finite dimension, Poisson's ratio, and piezoelectric effect. In this paper, an analytical model based on the superposition method is developed to obtain the coupled dynamic response of a piezoelectric cylinder under an applied voltage. The problem can be described mathematically by three partial differential equations with mixed boundary conditions in the cylindrical coordinates system. To solve this, the problem is decomposed first into two building block - vibrations in radial and thickness directions. In each building block, the expressions of displacements and electric potential are assumed and then the induced dynamic responses, such as in-plane stress and electric displacements, are calculated. Finally, the vibration responses of the two building blocks are superimposed to satisfy the mixed boundary conditions using Fourier and Fourier-Bessel series expansions. Electrical impedance of a typical piezoelectric disk and frequency spectrum of piezoelectric cylinders of different diameter-to-thickness ratios are calculated by the present analytical method as well as by finite element method. Comparison shows an excellent agreement. This analytical model can be applied to material characterization and the design and the optimization of the active elements of piezoelectric devices.

20.
Materials (Basel) ; 14(9)2021 Apr 27.
Artículo en Inglés | MEDLINE | ID: mdl-33925669

RESUMEN

Ultrasonic transducers performance can be seriously deteriorated by loss of adhesion between some constitutive elements such as the active element, the backing, or the matching layer. In the present work, the influence of bonding delaminations on the performance of a single-element ultrasonic transducer, which is composed of a piezoelectric disk, a backing, and a matching layer, is studied numerically and experimentally. Based on the positions between layers, two cases, i.e., delaminations between ceramic and backing or between ceramic and matching layer, are considered. Each case involves three different types of delaminations, which are marked as delamination type (DT)-I, II, and III. DT-I, a circular shape delamination, starts from the center and expands towards the peripheric zone; DT-II, an annular shape delamination, starts from the peripheric zone and expands towards the center; DT-III is a sector shape delamination with a given angle. The numerical simulations are performed by the finite element method and the influence of delaminations on the electromechanical admittance (EMA) of the transducer is investigated. 3D printed backings and matching layers are mounted on a PZT sample to assemble delaminated single-element transducers. An impedance analyzer is used for experimental measurements. Comparison between numerical and experimental results shows a reasonable agreement making changes in EMA an interesting indicator to inform about the occurrence and severity of delaminations in a single-element ultrasonic transducer.

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