Búsqueda | Biblioteca Virtual en Salud

1.

The underappreciated diversity of bile acid modifications.

Mohanty, Ipsita; Mannochio-Russo, Helena; Schweer, Joshua V; El Abiead, Yasin; Bittremieux, Wout; Xing, Shipei; Schmid, Robin; Zuffa, Simone; Vasquez, Felipe; Muti, Valentina B; Zemlin, Jasmine; Tovar-Herrera, Omar E; Moraïs, Sarah; Desai, Dhimant; Amin, Shantu; Koo, Imhoi; Turck, Christoph W; Mizrahi, Itzhak; Kris-Etherton, Penny M; Petersen, Kristina S; Fleming, Jennifer A; Huan, Tao; Patterson, Andrew D; Siegel, Dionicio; Hagey, Lee R; Wang, Mingxun; Aron, Allegra T; Dorrestein, Pieter C.

Cell ; 187(7): 1801-1818.e20, 2024 Mar 28.

Artículo Inglés | MEDLINE | ID: mdl-38471500

2.

Mortality Risk Profiling of Staphylococcus aureus Bacteremia by Multi-omic Serum Analysis Reveals Early Predictive and Pathogenic Signatures.

Wozniak, Jacob M; Mills, Robert H; Olson, Joshua; Caldera, J R; Sepich-Poore, Gregory D; Carrillo-Terrazas, Marvic; Tsai, Chih-Ming; Vargas, Fernando; Knight, Rob; Dorrestein, Pieter C; Liu, George Y; Nizet, Victor; Sakoulas, George; Rose, Warren; Gonzalez, David J.

Cell ; 182(5): 1311-1327.e14, 2020 09 03.

Artículo Inglés | MEDLINE | ID: mdl-32888495

3.

Microbial Skin Inhabitants: Friends Forever.

Dorrestein, Pieter C; Gallo, Richard L; Knight, Rob.

Cell ; 165(4): 771-2, 2016 May 05.

Artículo Inglés | MEDLINE | ID: mdl-27153488

4.

Reverse metabolomics for the discovery of chemical structures from humans.

Gentry, Emily C; Collins, Stephanie L; Panitchpakdi, Morgan; Belda-Ferre, Pedro; Stewart, Allison K; Carrillo Terrazas, Marvic; Lu, Hsueh-Han; Zuffa, Simone; Yan, Tingting; Avila-Pacheco, Julian; Plichta, Damian R; Aron, Allegra T; Wang, Mingxun; Jarmusch, Alan K; Hao, Fuhua; Syrkin-Nikolau, Mashette; Vlamakis, Hera; Ananthakrishnan, Ashwin N; Boland, Brigid S; Hemperly, Amy; Vande Casteele, Niels; Gonzalez, Frank J; Clish, Clary B; Xavier, Ramnik J; Chu, Hiutung; Baker, Erin S; Patterson, Andrew D; Knight, Rob; Siegel, Dionicio; Dorrestein, Pieter C.

Nature ; 626(7998): 419-426, 2024 Feb.

Artículo Inglés | MEDLINE | ID: mdl-38052229

5.

Bile salt hydrolase catalyses formation of amine-conjugated bile acids.

Rimal, Bipin; Collins, Stephanie L; Tanes, Ceylan E; Rocha, Edson R; Granda, Megan A; Solanki, Sumeet; Hoque, Nushrat J; Gentry, Emily C; Koo, Imhoi; Reilly, Erin R; Hao, Fuhua; Paudel, Devendra; Singh, Vishal; Yan, Tingting; Kim, Min Soo; Bittinger, Kyle; Zackular, Joseph P; Krausz, Kristopher W; Desai, Dhimant; Amin, Shantu; Coleman, James P; Shah, Yatrik M; Bisanz, Jordan E; Gonzalez, Frank J; Vanden Heuvel, John P; Wu, Gary D; Zemel, Babette S; Dorrestein, Pieter C; Weinert, Emily E; Patterson, Andrew D.

Nature ; 626(8000): 859-863, 2024 Feb.

Artículo Inglés | MEDLINE | ID: mdl-38326609

6.

ncRNA- and Pc2 methylation-dependent gene relocation between nuclear structures mediates gene activation programs.

Yang, Liuqing; Lin, Chunru; Liu, Wen; Zhang, Jie; Ohgi, Kenneth A; Grinstein, Jonathan D; Dorrestein, Pieter C; Rosenfeld, Michael G.

Cell ; 147(4): 773-88, 2011 Nov 11.

Artículo Inglés | MEDLINE | ID: mdl-22078878

7.

Trachymyrmex septentrionalis ants promote fungus garden hygiene using Trichoderma-derived metabolite cues.

Kyle, Kathleen E; Puckett, Sara P; Caraballo-Rodríguez, Andrés Mauricio; Rivera-Chávez, José; Samples, Robert M; Earp, Cody E; Raja, Huzefa A; Pearce, Cedric J; Ernst, Madeleine; van der Hooft, Justin J J; Adams, Madison E; Oberlies, Nicholas H; Dorrestein, Pieter C; Klassen, Jonathan L; Balunas, Marcy J.

Proc Natl Acad Sci U S A ; 120(25): e2219373120, 2023 Jun 20.

Artículo Inglés | MEDLINE | ID: mdl-37319116

8.

Distinguishing the molecular diversity, nutrient content, and energetic potential of exometabolomes produced by macroalgae and reef-building corals.

Wegley Kelly, Linda; Nelson, Craig E; Petras, Daniel; Koester, Irina; Quinlan, Zachary A; Arts, Milou G I; Nothias, Louis-Felix; Comstock, Jacqueline; White, Brandie M; Hopmans, Ellen C; van Duyl, Fleur C; Carlson, Craig A; Aluwihare, Lihini I; Dorrestein, Pieter C; Haas, Andreas F.

Proc Natl Acad Sci U S A ; 119(5)2022 02 01.

Artículo Inglés | MEDLINE | ID: mdl-35101918

9.

The Gut Microbial Bile Acid Modulation and Its Relevance to Digestive Health and Diseases.

Fogelson, Kelly A; Dorrestein, Pieter C; Zarrinpar, Amir; Knight, Rob.

Gastroenterology ; 164(7): 1069-1085, 2023 06.

Artículo Inglés | MEDLINE | ID: mdl-36841488

10.

Comparative Metabolomics and Microbiome Analysis of Ethanol versus OMNImet/geneâ¢GUT Fecal Stabilization.

Isokääntä, Heidi; Pinto da Silva, Lucas; Karu, Naama; Kallonen, Teemu; Aatsinki, Anna-Katariina; Hankemeier, Thomas; Schimmel, Leyla; Diaz, Edgar; Hyötyläinen, Tuulia; Dorrestein, Pieter C; Knight, Rob; Oresic, Matej; Kaddurah-Daouk, Rima; Dickens, Alex M; Lamichhane, Santosh.

Anal Chem ; 2024 May 23.

Artículo Inglés | MEDLINE | ID: mdl-38782403

11.

Improving annotation propagation on molecular networks through random walks: introducing ChemWalker.

Borelli, Tiago Cabral; Arini, Gabriel Santos; Feitosa, Luís G P; Dorrestein, Pieter C; Lopes, Norberto Peporine; da Silva, Ricardo R.

Bioinformatics ; 39(3)2023 03 01.

Artículo Inglés | MEDLINE | ID: mdl-36864626

12.

Author Correction: Inflammation-induced IgA⁺ cells dismantle anti-liver cancer immunity.

Shalapour, Shabnam; Lin, Xue-Jia; Bastian, Ingmar N; Brain, John; Burt, Alastair D; Aksenov, Alexander A; Vrbanac, Alison F; Li, Weihua; Perkins, Andres; Matsutani, Takaji; Zhong, Zhenyu; Dhar, Debanjan; Navas-Molina, Jose A; Xu, Jun; Loomba, Rohit; Downes, Michael; Yu, Ruth T; Evans, Ronald M; Dorrestein, Pieter C; Knight, Rob; Benner, Christopher; Anstee, Quentin M; Karin, Michael.

Nature ; 561(7721): E1, 2018 09.

Artículo Inglés | MEDLINE | ID: mdl-29973714

13.

Functional genomics and metabolomics advance the ethnobotany of the Samoan traditional medicine "matalafi".

Molimau-Samasoni, Seeseei; Woolner, Victoria Helen; Foliga, Su'emalo Talie; Robichon, Katharina; Patel, Vimal; Andreassend, Sarah K; Sheridan, Jeffrey P; Te Kawa, Tama; Gresham, David; Miller, Darach; Sinclair, Daniel J; La Flamme, Anne C; Melnik, Alexey V; Aron, Allegra; Dorrestein, Pieter C; Atkinson, Paul H; Keyzers, Robert A; Munkacsi, Andrew B.

Proc Natl Acad Sci U S A ; 118(45)2021 11 09.

Artículo Inglés | MEDLINE | ID: mdl-34725148

14.

Unified and Standardized Mass Spectrometry Data Processing in Python Using spectrum_utils.

Bittremieux, Wout; Levitsky, Lev; Pilz, Matteo; Sachsenberg, Timo; Huber, Florian; Wang, Mingxun; Dorrestein, Pieter C.

J Proteome Res ; 22(2): 625-631, 2023 02 03.

Artículo Inglés | MEDLINE | ID: mdl-36688502

15.

Using Multidimensional Separations to Distinguish Isomeric Amino Acid-Bile Acid Conjugates and Assess Their Presence and Perturbations in Model Systems.

Stewart, Allison K; Foley, Matthew H; Dougherty, Michael K; McGill, Sarah K; Gulati, Ajay S; Gentry, Emily C; Hagey, Lee R; Dorrestein, Pieter C; Theriot, Casey M; Dodds, James N; Baker, Erin S.

Anal Chem ; 95(41): 15357-15366, 2023 10 17.

Artículo Inglés | MEDLINE | ID: mdl-37796494

16.

ReDU: a framework to find and reanalyze public mass spectrometry data.

Jarmusch, Alan K; Wang, Mingxun; Aceves, Christine M; Advani, Rohit S; Aguirre, Shaden; Aksenov, Alexander A; Aleti, Gajender; Aron, Allegra T; Bauermeister, Anelize; Bolleddu, Sanjana; Bouslimani, Amina; Caraballo Rodriguez, Andres Mauricio; Chaar, Rama; Coras, Roxana; Elijah, Emmanuel O; Ernst, Madeleine; Gauglitz, Julia M; Gentry, Emily C; Husband, Makhai; Jarmusch, Scott A; Jones, Kenneth L; Kamenik, Zdenek; Le Gouellec, Audrey; Lu, Aileen; McCall, Laura-Isobel; McPhail, Kerry L; Meehan, Michael J; Melnik, Alexey V; Menezes, Riya C; Montoya Giraldo, Yessica Alejandra; Nguyen, Ngoc Hung; Nothias, Louis Felix; Nothias-Esposito, Mélissa; Panitchpakdi, Morgan; Petras, Daniel; Quinn, Robert A; Sikora, Nicole; van der Hooft, Justin J J; Vargas, Fernando; Vrbanac, Alison; Weldon, Kelly C; Knight, Rob; Bandeira, Nuno; Dorrestein, Pieter C.

Nat Methods ; 17(9): 901-904, 2020 09.

Artículo Inglés | MEDLINE | ID: mdl-32807955

17.

Chemically informed analyses of metabolomics mass spectrometry data with Qemistree.

Tripathi, Anupriya; Vázquez-Baeza, Yoshiki; Gauglitz, Julia M; Wang, Mingxun; Dührkop, Kai; Nothias-Esposito, Mélissa; Acharya, Deepa D; Ernst, Madeleine; van der Hooft, Justin J J; Zhu, Qiyun; McDonald, Daniel; Brejnrod, Asker D; Gonzalez, Antonio; Handelsman, Jo; Fleischauer, Markus; Ludwig, Marcus; Böcker, Sebastian; Nothias, Louis-Félix; Knight, Rob; Dorrestein, Pieter C.

Nat Chem Biol ; 17(2): 146-151, 2021 02.

Artículo Inglés | MEDLINE | ID: mdl-33199911

18.

Finding the missing links among metabolites, microbes, and the host.

Dorrestein, Pieter C; Mazmanian, Sarkis K; Knight, Rob.

Immunity ; 40(6): 824-32, 2014 Jun 19.

Artículo Inglés | MEDLINE | ID: mdl-24950202

19.

Urine Excretion, Organ Distribution, and Placental Transfer of 6PPD and 6PPD-Quinone in Mice and Potential Developmental Toxicity through Nuclear Receptor Pathways.

Zhao, Haoqi Nina; Thomas, Sydney P; Zylka, Mark J; Dorrestein, Pieter C; Hu, Wenxin.

Environ Sci Technol ; 57(36): 13429-13438, 2023 09 12.

Artículo Inglés | MEDLINE | ID: mdl-37642336

20.

Bacterial and Chemical Evidence of Coastal Water Pollution from the Tijuana River in Sea Spray Aerosol.

Pendergraft, Matthew A; Belda-Ferre, Pedro; Petras, Daniel; Morris, Clare K; Mitts, Brock A; Aron, Allegra T; Bryant, MacKenzie; Schwartz, Tara; Ackermann, Gail; Humphrey, Greg; Kaandorp, Ethan; Dorrestein, Pieter C; Knight, Rob; Prather, Kimberly A.

Environ Sci Technol ; 57(10): 4071-4081, 2023 03 14.

Artículo Inglés | MEDLINE | ID: mdl-36862087

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