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Extremophiles ; 26(3): 35, 2022 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-36378360

RESUMEN

The current study describes a novel species with the strain name ERMR1:05T isolated from the forefield soil of East Rathong Glacier in West Sikkim Himalaya (India). The isolate was facultatively anaerobic, gram-stain negative, non-spore-forming, rod-shaped, and oxidase negative. Whole-genome-based bacterial core gene phylogenetic analysis placed the strain in the genus Rahnella, well separated from Rouxiella spp. The digital DNA-DNA hybridisation and average nucleotide identity values between strain ERMR1:05T and other members of genus Rahnella were below the proposed thresholds for the species delineation. Based on these results, a new species, Rahnella sikkimica sp. nov., is proposed with strain ERMR1:05T (CIP 111636T, MTCC 12598T) as the type strain. The bacterium showed upregulation of cold-stress genes in cold conditions. Additionally, the genome analysis of the bacterium showed the presence of plant growth-promotion factors suggesting its role in crop improvement in cold hilly regions.


Asunto(s)
Cubierta de Hielo , Rahnella , Cubierta de Hielo/microbiología , Rahnella/genética , ARN Ribosómico 16S/genética , Filogenia , ADN Bacteriano/genética , Técnicas de Tipificación Bacteriana , Composición de Base , Sikkim , Análisis de Secuencia de ADN , Ácidos Grasos , Fosfolípidos
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