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1.
Lupus ; 25(2): 137-54, 2016 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-26385218

RESUMEN

Lupus is an autoimmune disease characterized by the development of antinuclear autoantibodies and immune complex-mediated tissue damage. T cells in lupus patients appear to undergo apoptosis at an increased rate, and this enhanced T cell apoptosis has been postulated to contribute to lupus pathogenesis by increasing autoantigen load. However, there is no direct evidence to support this hypothesis. In this study, we show that an Lck-cre transgene, which increases T cell apoptosis as a result of T cell-specific expression of cre recombinase, accelerates the development of autoantibodies and nephritis in lupus-prone (NZB × NZW)F1 mice. Although the enhanced T cell apoptosis in Lck-cre transgenic mice resulted in an overall decrease in the relative abundance of splenic CD4(+) and CD8(+) T cells, the proportion of activated CD4(+) T cells was increased and no significant change was observed in the relative abundance of suppressive T cells. We postulate that the Lck-cre transgene promoted lupus by enhancing T cell apoptosis, which, in conjunction with the impaired clearance of apoptotic cells in lupus-prone mice, increased the nuclear antigen load and accelerated the development of anti-nuclear autoantibodies. Furthermore, our results also underscore the importance of including cre-only controls in studies using the cre-lox system.


Asunto(s)
Autoanticuerpos/biosíntesis , Nefritis Lúpica/genética , Nefritis Lúpica/inmunología , Transgenes , Alelos , Animales , Complejo Antígeno-Anticuerpo/inmunología , Apoptosis/genética , Apoptosis/inmunología , Autoanticuerpos/genética , Modelos Animales de Enfermedad , Femenino , Integrasas/metabolismo , Masculino , Ratones , Ratones Endogámicos NZB , Ratones Transgénicos , Análisis de Secuencia , Linfocitos T/inmunología , Linfocitos T/patología
2.
Microbiology (Reading) ; 158(Pt 6): 1560-1569, 2012 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-22403189

RESUMEN

The capsule polysaccharide locus (cps) is the site of the capsule biosynthesis gene cluster in encapsulated Streptococcus pneumoniae. A set of pneumococcal samples and non-pneumococcal streptococci from Denmark, the Gambia, the Netherlands, Thailand, the UK and the USA were sequenced at the cps locus to elucidate serologically mistyped or non-typable isolates. We identified a novel serotype 33B/33C mosaic capsule cluster and previously unseen serotype 22F capsule genes, disrupted and deleted cps clusters, the presence of aliB and nspA genes that are unrelated to capsule production, and similar genes in the non-pneumococcal samples. These data provide greater understanding of diversity at a locus which is crucial to the antigenic diversity of the pathogen and current vaccine strategies.


Asunto(s)
Cápsulas Bacterianas/genética , Proteínas Bacterianas/genética , Variación Genética , Neumonía Neumocócica/microbiología , Streptococcus pneumoniae/metabolismo , Cápsulas Bacterianas/biosíntesis , Proteínas Bacterianas/metabolismo , Eliminación de Gen , Sitios Genéticos , Humanos , Datos de Secuencia Molecular , Familia de Multigenes , Streptococcus pneumoniae/clasificación , Streptococcus pneumoniae/genética , Streptococcus pneumoniae/aislamiento & purificación
3.
Science ; 256(5057): 668-70, 1992 May 01.
Artículo en Inglés | MEDLINE | ID: mdl-1350108

RESUMEN

Germ-line mutations of the APC gene are responsible for familial adenomatous polyposis (FAP), an autosomal dominantly inherited disease in humans. Patients with FAP develop multiple benign colorectal tumors. Recently, a mouse lineage that exhibits an autosomal dominantly inherited predisposition to multiple intestinal neoplasia (Min) was described. Linkage analysis showed that the murine homolog of the APC gene (mApc) was tightly linked to the Min locus. Sequence comparison of mApc between normal and Min-affected mice identified a nonsense mutation, which cosegregated with the Min phenotype. This mutation is analogous to those found in FAP kindreds and in sporadic colorectal cancers.


Asunto(s)
Poliposis Adenomatosa del Colon/genética , Genes Supresores de Tumor , Neoplasias Intestinales/genética , Mutación , Animales , Secuencia de Bases , Southern Blotting , Neoplasias Colorrectales/genética , ADN de Neoplasias/química , ADN de Neoplasias/genética , Ligamiento Genético , Humanos , Ratones , Ratones Endogámicos AKR , Ratones Endogámicos BALB C , Ratones Endogámicos C57BL , Datos de Secuencia Molecular , Fenotipo , Polimorfismo de Longitud del Fragmento de Restricción , Homología de Secuencia de Ácido Nucleico
4.
Genes Immun ; 9(2): 137-52, 2008 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-18200028

RESUMEN

Estrogens promote lupus in humans and some mouse models of this disease. Nonetheless, little is known about the role of estrogen receptors in lupus pathogenesis. Here, we report that in females on the lupus-prone (NZB x NZW)F(1) background, disruption of estrogen receptor-alpha (ER alpha or Esr1) attenuated glomerulonephritis and increased survival. ER alpha deficiency also retarded development of anti-histone/DNA antibodies, suggesting that ER alpha promotes loss of immunologic tolerance. Furthermore, ER alpha deficiency in (NZB x NZW)F(1) females attenuated the subsequent development of anti-double-stranded DNA (dsDNA) IgG antibodies, which are associated with glomerulonephritis in this model. We provide evidence that ER alpha may promote lupus, at least in part, by inducing interferon-gamma, an estrogen-regulated cytokine that impacts this disease. ER alpha deficiency in (NZB x NZW)F(1) males increased survival and reduced anti-dsDNA antibodies, suggesting that ER alpha also modulates lupus in males. These studies demonstrate that ER alpha, rather than ER beta, plays a major role in regulating autoimmunity in (NZB x NZW)F(1) mice. Furthermore, our results suggest for the first time that ER alpha promotes lupus, at least in part, by impacting the initial loss of tolerance. These data suggest that targeted therapy disrupting ER alpha, most likely within the immune system, may be effective in the prevention and/or treatment of lupus.


Asunto(s)
Receptor alfa de Estrógeno/deficiencia , Receptor alfa de Estrógeno/genética , Lupus Eritematoso Sistémico/genética , Lupus Eritematoso Sistémico/inmunología , Animales , Receptor alfa de Estrógeno/fisiología , Femenino , Glomerulonefritis/genética , Glomerulonefritis/inmunología , Endogamia , Lupus Eritematoso Sistémico/prevención & control , Masculino , Ratones , Ratones Endogámicos NZB , Ratones Noqueados
5.
Cancer Res ; 57(5): 812-4, 1997 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-9041176

RESUMEN

We have tested the hypothesis that enteric bacteria are necessary for formation of intestinal adenomas in C57BL/6-ApcMin/+ mouse. Germ-free mice developed 2-fold fewer adenomas than conventional controls in the medial small intestine (7.3 versus 14.9; P < 0.003), but there were no significant differences in the rest of the intestinal tract. We conclude that microbial status does not strongly alter the adenoma phenotype in this mouse model of familial adenomatous polyposis. In parallel, we have found that C57BL/6-ApcMin/+ mice mutated at the beige locus, which controls natural killer activity, are also unaltered in adenoma multiplicity.


Asunto(s)
Poliposis Adenomatosa del Colon/genética , Neoplasias Intestinales/etiología , Intestinos/microbiología , Células Asesinas Naturales/inmunología , Animales , Vida Libre de Gérmenes , Intestino Delgado/microbiología , Intestino Delgado/patología , Ratones , Ratones Endogámicos C57BL , Ratones Mutantes
6.
Oncogene ; 19(28): 3182-92, 2000 Jun 29.
Artículo en Inglés | MEDLINE | ID: mdl-10918573

RESUMEN

The Mom1 (Modifier of Min-1) region of distal chromosome 4 was identified during a screen for polymorphic modifiers of intestinal tumorigenesis in ApcMin/+ mice. Here, we demonstrate that the Mom1AKR allele consists of two genetic components. These include the secretory phospholipase Pla2g2a, whose candidacy as a Mom1 resistance modifier has now been tested with several transgenic lines. A second region, distal to Pla2g2a, has also been identified using fine structure recombinants. Pla2g2aAKR transgenic mice demonstrate a modest resistance to tumorigenesis in the small intestine and a very robust resistance in the large intestine. Moreover, the tumor resistance in the colon of Pla2g2aAKR animals is dosage-dependent, a finding that is consistent with our observation that Pla2g2a is expressed in goblet cells. By contrast, mice carrying the distal Mom1 modifier demonstrate a modest tumor resistance that is confined to the small intestine. Thus, the phenotypes of these two modifier loci are complementary, both in their quantitative and regional effects. The additive effects and tight linkage of these modifiers may have been necessary for the initial identification of the Mom1 region.


Asunto(s)
Poliposis Adenomatosa del Colon/genética , Proteínas del Citoesqueleto/genética , Fosfolipasas A/genética , Proteína de la Poliposis Adenomatosa del Colon , Animales , Femenino , Células Caliciformes/patología , Humanos , Inmunidad Innata/genética , Intestinos/patología , Masculino , Ratones , Ratones Endogámicos AKR , Ratones Endogámicos C57BL , Ratones Transgénicos , Fosfolipasas A/biosíntesis
7.
Genetics ; 144(4): 1769-76, 1996 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-8978062

RESUMEN

The intestinal tumor multiplicity in mice heterozygous for ApcMin is strongly modulated by genetic background. On the sensitive C57BL/6J (B6) background, mice develop large numbers of intestinal adenomas. The AKR/J (AKR) strain carries alleles that correlate with a strong reduction in tumor multiplicity. To study the effect of one of these modifiers, Mom1, we have generated a mouse line in which the AKR allele of Mom1 is carried on the sensitive B6 genetic background. This strain was produced by using a marker-assisted selection method to eliminate unlinked AKR alleles more rapidly. The application and efficiency of this method are discussed. We used this strain to determine that Mom1 affects both tumor multiplicity and tumor size in a semi-dominant fashion.


Asunto(s)
Adenoma/genética , Regulación Neoplásica de la Expresión Génica , Genes APC , Neoplasias Intestinales/genética , Proteínas/genética , Animales , Mutación de Línea Germinal , Ratones , Neoplasias Experimentales/genética
8.
Genetics ; 144(4): 1777-85, 1996 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-8978063

RESUMEN

As genetic mapping of quantitative trait loci (QTL) becomes routine, the challenge is to identify the underlying genes. This paper develops rigorous genetic tests for evaluation of candidate genes for a QTL, involving determination of allelic status in inbred strains and fine-structure genetic mapping. For the Mom1 modifier of intestinal adenomas caused by ApcMin, these tests are used to evaluate two candidate genes: Pla2g2a, a secretory phospholipase, and Rap1GAP, a GTPase activating protein. Rap1GAP passes the first test but is excluded by a single fine-structure recombinant. Pla2g2a passes both tests and is a strong candidate for Mom1. Significantly, we also find that ApcMin-induced adenomas remain heterozygous for the Mom1 region, consistent with Mom1 acting outside the tumor lineage and encoding a secreted product.


Asunto(s)
Adenoma/genética , Mapeo Cromosómico , Genes APC , Neoplasias Intestinales/genética , Alelos , Animales , Ratones
9.
Eur J Cancer ; 31A(7-8): 1061-4, 1995.
Artículo en Inglés | MEDLINE | ID: mdl-7576992

RESUMEN

Min (multiple intestinal neoplasia) is a mutant allele of the murine Apc (adenomatous polyposis coli) locus, encoding a nonsense mutation at codon 850. Like humans with germline mutations in APC, Min/+ mice are predisposed to intestinal adenoma formation. The number of adenomas is influenced by modifier loci carried by different inbred strains. One modifier locus, Mom-1 (modifier of Min-1), maps to distal chromosome 4. Intestinal tumours from both B6 (C57BL/6J) and hybrid Min/+ mice show extensive loss of the wild-type allele at Apc. B6 Min/+ female mice are predisposed to spontaneous mammary tumours. The incidence of both intestinal and mammary tumours can be increased in an age-specific manner by treatment with ethylnitrosourea (ENU). Min mice provide a good animal model for studying the role of Apc and interacting genes in the initiation and progression of intestinal and mammary tumorigenesis.


Asunto(s)
Poliposis Adenomatosa del Colon/genética , Modelos Animales de Enfermedad , Genes APC , Neoplasias Mamarias Experimentales/genética , Animales , Femenino , Mutación de Línea Germinal , Ratones , Ratones Endogámicos
10.
Mol Cell Endocrinol ; 170(1-2): 31-9, 2000 Dec 22.
Artículo en Inglés | MEDLINE | ID: mdl-11162888

RESUMEN

Many tissues, including the thymus, represent direct targets of estrogen action. In contrast to many estrogen responsive tissues, the thymus undergoes a profound atrophy in response to elevated levels of estrogens. The mechanism of estrogen-induced atrophy in the thymus is unknown; however, it appears not to involve massive thymocyte apoptosis. Here, we demonstrate that the estrogen diethylstilbestrol (DES) inhibits cell proliferation within the thymic cortex, the primary site of thymocyte proliferation. Unlike glucocorticoid action, the effect of DES on thymocyte proliferation does not appear to be mediated by direct down regulation of cyclin D3. We also demonstrate for the first time that rat strains vary in their sensitivity to DES-induced thymic atrophy. This sensitivity correlates with the ability of DES to inhibit cell proliferation in the thymus. These data suggest that genetic factors may regulate estrogen action within this tissue by affecting estrogen responsive pathways that control cell proliferation.


Asunto(s)
Dietilestilbestrol/farmacología , Timo/efectos de los fármacos , Animales , Proteínas de Ciclo Celular/efectos de los fármacos , División Celular/efectos de los fármacos , Dietilestilbestrol/administración & dosificación , Estrógenos no Esteroides/administración & dosificación , Estrógenos no Esteroides/farmacología , Femenino , Variación Genética/efectos de los fármacos , Variación Genética/fisiología , Tamaño de los Órganos/efectos de los fármacos , Ratas , Ratas Endogámicas BN , Ratas Endogámicas F344 , Ratas Sprague-Dawley , Timo/citología , Factores de Tiempo
11.
APMIS ; 97(12): 1053-67, 1989 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-2611021

RESUMEN

We studied by immunocytochemistry 573 tissue and 106 cytologic samples of human tumors, non-neoplastic proliferative lesions and normal tissues with the monoclonal antibody (Mab) A-80 that recognizes a mucinous glycoprotein from the colon carcinoma cell line LS-174T. The spectrum of benign and malignant breast lesions was studied as were epithelial tumors of the colon, stomach, pancreas, lung, salivary glands, thyroid, prostate, kidney, endometrium, skin and mesothelium; non-epithelial tumors included lymphomas, melanomas, gliomas, meningiomas, and sarcomas of soft tissue and bone. With a single exception, breast carcinomas regardless of histologic type were reactive while few fibroadenomas stained weakly and focally. In fibrocystic disease, the presence and intensity of the reactivity paralleled the severity of the epithelial proliferation, e.g. staining was strong in foci of severe or atypical hyperplasia, borderline lesions and carcinomas in situ; apocrine metaplasia stained often but less strongly. Barrett's mucosa, colonic polyps and most gastric and colonic carcinomas stained regardless of glandular features while small cell neuroendocrine carcinomas did not. Adenocarcinomas of the pancreas and lung, and a subset of large cell lung carcinomas reacted whereas neuroendocrine carcinomas of those sites did not. Carcinomas of endometrium, ovary and prostate reacted variably whereas thyroid and renal carcinomas and mesotheliomas were either negative or weakly reactive despite the presence of glands. Lymphomas, skin adnexal tumors, nevi, schwannomas, melanomas, gliomas and sarcomas generally did not react but occasional A-80-positive cells were seen in rare sarcomas and meningiomas. Immunostaining patterns in cytologic specimens were similar to the aforementioned. We conclude that Mab A-80 is an excellent marker for breast carcinomas, and for certain proliferative forms of fibrocystic disease that may precede or be associated with carcinomatous transformation. In colonic, pulmonary and gastric carcinomas, staining with Mab A-80 revealed exocrine features regardless of the absence of glands whereas in renal and thyroid carcinomas and in mesotheliomas staining was focal and weak or absent irrespective of glandular features. We suggest that Mab A-80 is a very promising immunolabel for select exocrine carcinomas, and for some of the dysplasias that may precede their development; its ease of application on tissue sections and cytologic specimens should broaden its usefulness.


Asunto(s)
Anticuerpos Monoclonales , Mucinas/metabolismo , Neoplasias/metabolismo , Anticuerpos Monoclonales/inmunología , Biomarcadores de Tumor/análisis , Neoplasias de la Mama/metabolismo , Neoplasias de la Mama/patología , Carcinoma/metabolismo , Carcinoma/patología , Epitelio/metabolismo , Epitelio/patología , Enfermedad Fibroquística de la Mama/metabolismo , Enfermedad Fibroquística de la Mama/patología , Neoplasias Gastrointestinales/metabolismo , Neoplasias Gastrointestinales/patología , Humanos , Inmunohistoquímica , Neoplasias Pulmonares/metabolismo , Neoplasias Pulmonares/patología , Mucinas/inmunología , Neoplasias/patología
12.
Gene Expr ; 7(2): 87-101, 1998.
Artículo en Inglés | MEDLINE | ID: mdl-9699481

RESUMEN

TAL1 is a helix-loop-helix transcription factor that is essential for hematopoiesis. In vitro DNA binding site selection experiments have previously identified the preferred binding site for TAL1 heterodimers as AACAGATGGT. TAL1 homodimers do not bind DNA with significant affinity. A subset of other E-box sequences is also bound by TAL1 heterodimers. Here, we present an analysis of TAL1 heterodimer DNA binding specificity, using E-boxes derived from genomic clones, which were isolated by immunoadsorption of K562 erythroleukemia cell chromatin with a TAL1 antibody. We show that TAL1 heterodimer binding to a CAGATG E-box is strongly modulated by nucleotides flanking the E-box. A 10 base pair element consisting of the CAGATG E-box and two flanking nucleotides in both the 5' and 3' direction is sufficient for high-affinity binding. Certain mutations of nucleotides in either the 5' (-1 and -2) or 3' (+1 and +2) direction strongly inhibit binding. The importance of flanking nucleotides also exists in the context of nonpreferred E-boxes recognized by TAL1 heterodimers. Although there are no known target genes for TAL1, the regulatory regions of several genes involved in hematopoiesis contain the preferred E-box CAGATG. However, based on our results, the E-boxes in these potential target genes contain flanking sequences that would be expected to significantly reduce TAL1 heterodimer binding in vitro. Thus, additional stabilizing forces, such as protein-protein interactions between TAL1 heterodimers and accessory factors, may be required to confer high-affinity TAL1 heterodimer binding to such sequences.


Asunto(s)
Cromatina/metabolismo , Proteínas de Unión al ADN/metabolismo , Proteínas Proto-Oncogénicas , Secuencias Reguladoras de Ácidos Nucleicos , Animales , Factores de Transcripción con Motivo Hélice-Asa-Hélice Básico , Núcleo Celular/metabolismo , Clonación Molecular , Secuencia de Consenso , Proteínas de Unión al ADN/biosíntesis , Proteínas de Unión al ADN/genética , Proteínas de Unión al ADN/inmunología , Dimerización , Electroforesis en Gel de Poliacrilamida , Hematopoyesis/genética , Humanos , Sueros Inmunes , Inmunoadsorbentes , Ratones , Mutación , Oligonucleótidos , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/metabolismo , Proteína 1 de la Leucemia Linfocítica T Aguda , Factores de Transcripción TCF , Proteína 1 Similar al Factor de Transcripción 7 , Factores de Transcripción/metabolismo , Células Tumorales Cultivadas
13.
J Am Dent Assoc ; 129(10): 1442-9, 1998 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-9787541

RESUMEN

The authors surveyed participants in a National Cancer Institute, or NCI, training program that provides brief tobacco cessation services. They found significant improvements in the frequency with which practitioners ask patients about tobacco use and assist patients in stopping tobacco use. Improvements also were found in the participants' level of confidence and preparedness to help patients quit. Despite some limitations, the NCI training was shown to be an effective program for the oral health care team.


Asunto(s)
Personal de Odontología/educación , National Institutes of Health (U.S.) , Cese del Uso de Tabaco/estadística & datos numéricos , Adulto , Terapia Conductista , Distribución de Chi-Cuadrado , Educación Continua en Odontología/métodos , Femenino , Humanos , Masculino , Persona de Mediana Edad , Nebraska , Encuestas y Cuestionarios , Cese del Uso de Tabaco/métodos , Estados Unidos
14.
J Sch Health ; 64(6): 254-7, 1994 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-7990434

RESUMEN

Substance abuse during pregnancy continues to be a serious health problem in the United States. Hazards associated with the use of alcohol, tobacco, and other drugs by pregnant women have been documented. The extent to which prenatal drug education is included in school health education has not been addressed. This survey determined the nature and extent of prenatal drug education being conducted by Nebraska school teachers in health-related fields. Educators in public and private schools who teach health-related courses were surveyed. Respondents indicated prenatal drug education is being addressed in a variety of courses. Amount of time devoted to the topic was 2.68 hours overall. Problems associated with providing prenatal drug education included inadequate teacher knowledge and training, lack of appropriate materials, and time limitations in the curriculum. Implications for comprehensive school health education are identified.


Asunto(s)
Curriculum , Educación en Salud/normas , Embarazo , Servicios de Salud Escolar/normas , Trastornos Relacionados con Sustancias/prevención & control , Adolescente , Femenino , Humanos , Nebraska , Evaluación de Programas y Proyectos de Salud/métodos , Encuestas y Cuestionarios
15.
Crit Care Nurs Clin North Am ; 1(3): 469-73, 1989 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-2818886

RESUMEN

Triggering and timing of the intra-aortic balloon pump are becoming more sophisticated but more clinically manageable. The key to understanding the data currently available is to go beyond early instruction to "eyeball" waveform analysis. Conclusive assessment of the patient's response to therapy lies in a greater understanding of today's technology and clinical competency in evaluating the patient's total hemodynamic, clinical, and laboratory response to assure maximal therapeutic efficiency of counterpulsation therapy. Nursing research on an ongoing basis will contribute to a greater understanding of this complex therapy. Many of the principles of balloon pumping were derived in the years following its initial introduction. Since that time, we have gained a depth of knowledge and an increased capacity for measuring physiologic and hemodynamic responses at the bedside. Concurrently, the medical industry has designed faster, smarter, and more efficient equipment to complement patient care. The critical care nurse faces the challenge of synthesizing the newest information from both areas and developing a greater understanding of the ongoing care of the patient on the IABP.


Asunto(s)
Diástole , Hemodinámica , Contrapulsador Intraaórtico/métodos , Contracción Miocárdica , Humanos , Sístole , Factores de Tiempo
16.
Crit Care Nurs Clin North Am ; 8(4): 477-90, 1996 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-9095819

RESUMEN

Patient care delivery has changed or has at least begun to change throughout institutions nationwide. Those who once regarded theory as a formulation for patient outcome have rendered it inefficient; as the practice of balloon pumping has expanded, many important questions have been raised surrounding the basis for procedures involving IABP. Nursing guidelines for correct IABP procedures are theoretically based procedures. Although it is influential, theory-based practice has proven to be an inefficient means for formulating current practice standards. The Ahern Gould and Stark Current Practice Survey exemplifies the uncertainties that surround the practice of IABP. The nationwide search for scientifically based IABP methods is realized as those surveyed present numerous questions, giving rise to clinical research directions for IABP practitioners.


Asunto(s)
Cuidados Críticos/organización & administración , Contrapulsador Intraaórtico/enfermería , Pautas de la Práctica en Medicina/organización & administración , Investigación en Enfermería Clínica , Humanos , Perfil Laboral , América del Norte , Guías de Práctica Clínica como Asunto , Encuestas y Cuestionarios
17.
Clin Microbiol Infect ; 20(10): O609-18, 2014 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-24422878

RESUMEN

A series of extensively drug-resistant isolates of Pseudomonas aeruginosa from two outbreaks in UK hospitals were characterized by whole genome sequencing (WGS). Although these isolates were resistant to antibiotics other than colistin, we confirmed that they are still sensitive to disinfectants. The sequencing confirmed that isolates in the larger outbreak were serotype O12, and also revealed that they belonged to sequence type ST111, which is a major epidemic strain of P. aeruginosa throughout Europe. As this is the first reported sequence of an ST111 strain, the genome was examined in depth, focusing particularly on antibiotic resistance and potential virulence genes, and on the reported regions of genome plasticity. High degrees of sequence similarity were discovered between outbreak isolates collected from recently infected patients, isolates from sinks, an isolate from the sewer, and a historical isolate, suggesting that the ST111 strain has been endemic in the hospital for many years. The ability to translate easily from outbreak investigation to detailed genome biology by use of the same data demonstrates the flexibility of WGS application in a clinical setting.


Asunto(s)
Infección Hospitalaria/microbiología , Farmacorresistencia Bacteriana , Infecciones por Pseudomonas/microbiología , Pseudomonas aeruginosa/genética , Análisis de Secuencia de ADN/métodos , Antibacterianos/farmacología , Infección Hospitalaria/epidemiología , Brotes de Enfermedades , Farmacorresistencia Bacteriana/efectos de los fármacos , Genoma Bacteriano , Humanos , Filogenia , Infecciones por Pseudomonas/epidemiología , Pseudomonas aeruginosa/clasificación , Pseudomonas aeruginosa/efectos de los fármacos , Pseudomonas aeruginosa/aislamiento & purificación , Serotipificación , Aguas del Alcantarillado/microbiología , Reino Unido/epidemiología
18.
mBio ; 2(3): e00040-11, 2011.
Artículo en Inglés | MEDLINE | ID: mdl-21693638

RESUMEN

We carried out multilocus sequence typing (MLST) on 148 pneumococcal carriage isolates collected from children <24 months old in the Upper River Division, the Gambia. MLST revealed a diverse population. Seventy-six different sequence types (STs) were found, the most common of which were 802 and 919, associated with 23F and 6A serotypes, respectively. Comparison with the MLST database showed that only 11 of the STs found in the present sample had been reported outside Africa. Six STs showed evidence of capsular switching (172, 802, 847, 1730, 1736, and 1737). Serotype switches were confirmed by microarrays that detected capsule genes. Of isolates analyzed by using microarrays, 40/69 (58%) harbored the tetM resistance determinant. A statistical genetic analysis to detect recombination found that 49/144 (34%) isolates showed significant (P<0.05) evidence of admixture, which is greater than that observed in similar samples from the United Kingdom (5%) and Finland (2%). We hypothesize that large amounts of admixture could reflect the high prevalence of multiple carriage in this region, leading to more opportunities for homologous recombination between strains. This could have consequences for the population response to conjugate vaccination.


Asunto(s)
Portador Sano/microbiología , Variación Genética , Infecciones Neumocócicas/microbiología , Recombinación Genética , Streptococcus pneumoniae/clasificación , Streptococcus pneumoniae/genética , Cápsulas Bacterianas/genética , Proteínas Bacterianas/genética , Análisis por Conglomerados , ADN Bacteriano/genética , Gambia , Genotipo , Humanos , Lactante , Recién Nacido , Análisis por Micromatrices , Tipificación de Secuencias Multilocus , Serotipificación , Streptococcus pneumoniae/aislamiento & purificación
20.
Clin Microbiol Infect ; 16(7): 1017-9, 2010 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-19681955

RESUMEN

Staphylococcus aureus of sequence type 398 has emerged in Europe, North America and Asia, and has typically been associated with livestock and their human contacts. We analysed two Panton-Valentine leukocidin (PVL)-negative t034-ST398 isolates from humans in contact with pigs and two t034-ST398 PVL-positive isolates from two unrelated, adopted Chinese children, using multistrain microarrays to determine genomic variability between the two sets of isolates. The ST398 isolates clearly belong to the same lineage when compared to other clonal lineages. However, the four isolates cluster into two distinct groups corresponding to differences in epidemiology based on mobile genetic elements and resistance patterns, suggesting that the two groups are epidemiologically distinct.


Asunto(s)
Farmacorresistencia Bacteriana Múltiple , Variación Genética , Secuencias Repetitivas Esparcidas , Staphylococcus aureus Resistente a Meticilina/genética , Animales , Antibacterianos/farmacología , Toxinas Bacterianas , Técnicas de Tipificación Bacteriana , Niño , Electroforesis en Gel de Campo Pulsado , Exotoxinas , Humanos , Leucocidinas , Resistencia a la Meticilina/genética , Staphylococcus aureus Resistente a Meticilina/clasificación , Staphylococcus aureus Resistente a Meticilina/efectos de los fármacos , Staphylococcus aureus Resistente a Meticilina/aislamiento & purificación , Pruebas de Sensibilidad Microbiana , Análisis de Secuencia por Matrices de Oligonucleótidos , Reacción en Cadena de la Polimerasa , Análisis de Secuencia de ADN , Infecciones Estafilocócicas/epidemiología , Infecciones Estafilocócicas/genética , Infecciones Estafilocócicas/microbiología , Porcinos/microbiología , Factores de Virulencia/genética
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