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1.
Antimicrob Agents Chemother ; 67(12): e0013623, 2023 12 14.
Artículo en Inglés | MEDLINE | ID: mdl-37966229

RESUMEN

Staphylococcus aureus is the most prevalent cystic fibrosis (CF) pathogen. Several phenotypes are associated with worsened CF clinical outcomes including methicillin-resistance and small-colony-variants. The inoculum effect (IE) is characterized by reduced ß-lactam susceptibility when assessed at high inoculum. The IE associates with worse outcomes in bacteremia and other high-density infections, and may therefore be relevant to CF. The prevalence of IE amongst a CF cohort (age ≥18 years), followed from 2013 to 2016, was investigated. Yearly methicillin-sensitive S. aureus (MSSA) isolates were screened at standard (5 × 105 CFU/mL) and high (5 × 107 CFU/mL) inoculum against narrow-spectrum anti-Staphylococcal ß-lactams and those with anti-pseudomonal activity common to CF. A ≥ 4-fold increase in minimum inhibitory concentration between standard and high inoculum defined IE. Isolates underwent blaZ sequencing and genotyping and were compared against published genomes. Fifty-six percent (99/177) of individuals had MSSA infection. MSSA was observed at ≥105 CFU/mL in 44.8% of entry sputum samples. The prevalence of the IE was 25.0%-cefazolin; 13.5%-cloxacillin; 0%-meropenem; 1.0%-cefepime; 5.2%-ceftazidime; and 34.4%-piperacillin-tazobactam amongst baseline MSSA isolates assessed. blaZ A associated with cefazolin IE (P = 0.0011), whereas blaZ C associated with piperacillin-tazobactam IE (P < 0.0001). Baseline demographics did not reveal specific risk factors for IE-associated infections, nor were long-term outcomes different. Herein, we observed the IE in CF-derived MSSA disproportionally for cefazolin and piperacillin-tazobactam and this phenotype strongly associated with underlying blaZ genotype. The confirmation of CF being a high density infection, and the identification of high prevalence of MSSA with IE in CF supports the need for prospective pulmonary exacerbation treatment studies to understand the impact of this phenotype.


Asunto(s)
Fibrosis Quística , Infecciones Estafilocócicas , Adulto , Humanos , Adolescente , Meticilina/farmacología , Meticilina/uso terapéutico , Cefazolina/farmacología , Staphylococcus aureus/genética , Antibacterianos/farmacología , Antibacterianos/uso terapéutico , Estudios Prospectivos , Fibrosis Quística/tratamiento farmacológico , Infecciones Estafilocócicas/tratamiento farmacológico , Infecciones Estafilocócicas/epidemiología , Monobactamas/farmacología , Combinación Piperacilina y Tazobactam/uso terapéutico , Ceftazidima/farmacología , Antibióticos Betalactámicos , Pruebas de Sensibilidad Microbiana
2.
Anaerobe ; 78: 102640, 2022 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-36126828

RESUMEN

BACKGROUND: Our large regional laboratory routinely provides a definitive identification (ID) for 800-1,200 anaerobic bacteria per annum that cause invasive human infections. An increasing number of isolates (i.e., 10 to 13%) recovered from clinical specimens from these cases were more unusual or rarely isolated genera and/or species (i.e., ≤5 individual cases/annum). METHODS: VITEK® MS (MALDI-TOF MS) is done initially on all anaerobic bacteria, but rare isolates undergo in-house PCR/sequencing when proteomics provides a wrong ID or no results despite repeat testing. A clinical microbiologist in consultation with the Infectious Diseases service approves molecular analyses. This multi-year comparison (2014-19) of the performance of MALDI-TOF MS and 16S rRNA gene sequencing using the IDNS® SmartGene bacterial dataset shows both method's abilities to provide a genus-level and/or species-level ID for rare isolates. RESULTS: 489 rare anaerobes were recovered from a variety of clinical specimens: 57% blood cultures, 19% other sterile fluids, 14% sterile tissues, 8% deep wounds/abscesses, and 2% prosthetic implants. 16S rRNA gene sequencing gave an accurate genus-vs. species level ID for 487/489 (99.6%) and 401/489 (82.0%) of isolates respectively. Accurate genus-vs species-level ID were obtained by MALDI-TOF MS for 269/489 (53.4%) and 187/489 (37.3%) of isolates respectively. MALDI-TOF MS gave wrong or no results for 35.1% of Gram-negative anaerobic cocci (GNAC), 62% of Gram-negative anaerobic bacilli (GNAB), 30.8% of Gram-positive anaerobic cocci (GPAC) and 46.3% of Gram-positive anaerobic bacilli (GPAB). Neither method gave an ID for one GNAB and one GPAC isolate. MALDI-TOF MS genus-level ID of GNAC and genus/species-level ID of GPAB improved during the study but its performance remained stable for genus- or species-level ID of other organism groups. CONCLUSIONS: MALDI-TOF MS provides accurate ID for most common anaerobes, but molecular analyses need to be available for rare isolates. Large complex laboratories should have a workflow for sending rare isolates for 16S rRNA gene sequencing in invasive cases where a definitive ID is clinically required.


Asunto(s)
Bacterias Anaerobias , Laboratorios , Humanos , Técnicas de Tipificación Bacteriana/métodos , ARN Ribosómico 16S/genética , Genes de ARNr , Canadá , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción/métodos , Bacterias Gramnegativas
3.
J Clin Microbiol ; 54(3): 712-7, 2016 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-26739153

RESUMEN

Actinomyces species are uncommon but important causes of invasive infections. The ability of our regional clinical microbiology laboratory to report species-level identification of Actinomyces relied on molecular identification by partial sequencing of the 16S ribosomal gene prior to the implementation of the Vitek MS (matrix-assisted laser desorption ionization-time of flight mass spectrometry [MALDI-TOF MS]) system. We compared the use of the Vitek MS to that of 16S rRNA gene sequencing for reliable species-level identification of invasive infections caused by Actinomyces spp. because limited data had been published for this important genera. A total of 115 cases of Actinomyces spp., either alone or as part of a polymicrobial infection, were diagnosed between 2011 and 2014. Actinomyces spp. were considered the principal pathogen in bloodstream infections (n = 17, 15%), in skin and soft tissue abscesses (n = 25, 22%), and in pulmonary (n = 26, 23%), bone (n = 27, 23%), intraabdominal (n = 16, 14%), and central nervous system (n = 4, 3%) infections. Compared to sequencing and identification from the SmartGene Integrated Database Network System (IDNS), Vitek MS identified 47/115 (41%) isolates to the correct species and 10 (9%) isolates to the correct genus. However, the Vitek MS was unable to provide identification for 43 (37%) isolates while 15 (13%) had discordant results. Phylogenetic analyses of the 16S rRNA sequences demonstrate high diversity in recovered Actinomyces spp. and provide additional information to compare/confirm discordant identifications between MALDI-TOF and 16S rRNA gene sequences. This study highlights the diversity of clinically relevant Actinomyces spp. and provides an important typing comparison. Based on our analysis, 16S rRNA gene sequencing should be used to rapidly identify Actinomyces spp. until MALDI-TOF databases are optimized.


Asunto(s)
Actinomyces/clasificación , Actinomyces/genética , Actinomicosis/diagnóstico , Actinomicosis/microbiología , Análisis de Secuencia de ADN , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Actinomyces/aislamiento & purificación , Actinomicosis/epidemiología , Adolescente , Adulto , Anciano , Anciano de 80 o más Años , Técnicas de Tipificación Bacteriana , Niño , Preescolar , Femenino , Humanos , Masculino , Persona de Mediana Edad , Filogenia , ARN Ribosómico 16S/genética , Reproducibilidad de los Resultados , Adulto Joven
4.
J Clin Microbiol ; 54(2): 489-91, 2016 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-26659208

RESUMEN

The monitoring of epidemic Pseudomonas aeruginosa is important for cystic fibrosis (CF) infection control. The prairie epidemic strain (PES) is common in western Canadian CF clinics. Using whole-genome sequencing, we identified a novel genomic island and developed a PCR assay for PES. Against a collection of 186 P. aeruginosa isolates, the assay had 98% sensitivity and 100% specificity.


Asunto(s)
Fibrosis Quística/complicaciones , Reacción en Cadena de la Polimerasa , Infecciones por Pseudomonas/diagnóstico , Infecciones por Pseudomonas/microbiología , Pseudomonas aeruginosa/clasificación , Pseudomonas aeruginosa/genética , Electroforesis en Gel de Campo Pulsado , Genoma Bacteriano , Humanos , Tipificación de Secuencias Multilocus/métodos , Reacción en Cadena de la Polimerasa/métodos , Técnica del ADN Polimorfo Amplificado Aleatorio , Sensibilidad y Especificidad
5.
BMC Infect Dis ; 16(1): 634, 2016 11 04.
Artículo en Inglés | MEDLINE | ID: mdl-27814684

RESUMEN

BACKGROUND: Lactobacillus spp. are uncommon pathogens in immunocompetent hosts, and even rarer causes of prosthetic device infections. CASE PRESENTATION: A case of chronic hip prosthetic joint infection (PJI) caused by L. animalis is described. This occurred 5 years after a transient bacteremia with the same organism. Whole genome sequencing of both isolates proved this PJI infection resulted from this remote bacteremia. CONCLUSIONS: We document that prosthetic joint infections may be a consequence of bacteremia as much as 3 years before the onset of symptoms.


Asunto(s)
Artroplastia de Reemplazo de Cadera/efectos adversos , Técnicas de Tipificación Bacteriana/métodos , Articulación de la Cadera/microbiología , Prótesis de Cadera/microbiología , Lactobacillus/aislamiento & purificación , Infecciones Relacionadas con Prótesis/diagnóstico , Infecciones Relacionadas con Prótesis/microbiología , Anciano , Articulación de la Cadera/patología , Prótesis de Cadera/efectos adversos , Humanos , Lactobacillus/genética , Masculino , Análisis de Secuencia de ADN
6.
Antimicrob Agents Chemother ; 60(3): 1258-63, 2015 Dec 07.
Artículo en Inglés | MEDLINE | ID: mdl-26643346

RESUMEN

Enterobacteriaceae with blaNDM-7 are relatively uncommon and had previously been described in Europe, India, the United States, and Japan. This study describes the characteristics of Enterobacteriaceae (Klebsiella pneumoniae [n = 2], Escherichia coli [n = 2], Serratia marcescens [n = 1], and Enterobacter hormaechei [n = 1] isolates) with blaNDM-7 obtained from 4 patients from Calgary, Canada, from 2013 to 2014. The 46,161-bp IncX3 plasmids with blaNDM-7 are highly similar to other blaNDM-harboring IncX3 plasmids and, interestingly, showed identical structures within the different isolates. This finding may indicate horizontal transmission within our health region, or it may indicate contact with individuals from areas of endemicity within the hospital setting. Patients infected or colonized with bacteria containing blaNDM-7 IncX3 plasmids generate infection control challenges. Epidemiological and molecular studies are required to better understand the dynamics of transmission, the risk factors, and the reservoirs for bacteria harboring blaNDM-7. To the best of our knowledge, this is the first report of S. marcescens and E. hormaechei with blaNDM-7.


Asunto(s)
Enterobacteriaceae/efectos de los fármacos , Enterobacteriaceae/genética , Plásmidos/genética , beta-Lactamasas/genética , Alberta/epidemiología , Proteínas Bacterianas/genética , Infecciones por Enterobacteriaceae/epidemiología , Infecciones por Enterobacteriaceae/microbiología , Femenino , Secuenciación de Nucleótidos de Alto Rendimiento/métodos , Hospitales , Humanos , Klebsiella pneumoniae/efectos de los fármacos , Klebsiella pneumoniae/genética , Masculino , Pruebas de Sensibilidad Microbiana
7.
Infection ; 41(1): 41-8, 2013 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-23292663

RESUMEN

BACKGROUND: Anaerobes are a relatively uncommon but important cause of bloodstream infection. However, their epidemiology has not been well defined in non-selected populations. We sought to describe the incidence of, risk factors for, and outcomes associated with anaerobic bacteremia. METHODS: Population-based surveillance for bacteremia with anaerobic microorganisms was conducted in the Calgary area (population 1.2 million) during the period from 2000 to 2008. RESULTS: A total of 904 incident cases were identified, for an overall population incidence of 8.7 per 100,000 per year; 231 (26 %) were nosocomial, 300 (33 %) were healthcare-associated community-onset, and 373 (41 %) were community-acquired. Elderly males were at the greatest risk. The most common pathogens identified were: Bacteroides fragilis group (3.6 per 100,000), Clostridium (non-perfringens) spp. (1.1 per 100,000), Peptostreptococcus spp. (0.9 per 100,000), and Clostridium perfringens (0.7 per 100,000). Non-susceptibility to metronidazole was 2 %, to clindamycin 17 %, and to penicillin 42 %. Relative to the general population, risk factors for anaerobic bloodstream infection included: male sex, increasing age, a prior diagnosis of cancer, chronic liver disease, heart disease, diabetes mellitus, stroke, inflammatory bowel disease, human immunodeficiency virus (HIV) infection, chronic obstructive pulmonary disease (COPD), and/or hemodialysis-dependent chronic renal failure (HDCRF). The 30-day mortality was 20 %. Increasing age, nosocomial acquisition, presence of malignancy, and several other co-morbid illnesses were independently associated with an increased risk of death. CONCLUSION: Anaerobic bloodstream infection is responsible for a significant burden of disease in general populations. The data herein establish the extent to which anaerobes contribute to morbidity and subsequent mortality. This information is key in developing preventative, empiric treatment and research priorities.


Asunto(s)
Bacteriemia/epidemiología , Bacterias Anaerobias/aislamiento & purificación , Infecciones Bacterianas/epidemiología , Vigilancia de la Población , Alberta/epidemiología , Bacteriemia/microbiología , Bacteriemia/mortalidad , Bacterias Anaerobias/clasificación , Infecciones Bacterianas/microbiología , Infecciones Bacterianas/mortalidad , Humanos , Incidencia , Estudios Retrospectivos , Factores de Riesgo
8.
Epidemiol Infect ; 141(1): 174-80, 2013 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-22417845

RESUMEN

Although community-onset bloodstream infection (BSI) is recognized as a major cause of morbidity and mortality, its epidemiology has not been well defined in non-selected populations. We conducted population-based laboratory surveillance in the Victoria area, Canada during 1998-2005 in order to determine the burden associated with community-onset BSI. A total of 2785 episodes were identified for an overall annual incidence of 101·2/100,000. Males and the very young and the elderly were at highest risk. Overall 1980 (71%) episodes resulted in hospital admission for a median length of stay of 8 days; the total days of acute hospitalization associated with community-onset BSI was 28 442 days or 1034 days/100,000 population per year. The in-hospital case-fatality rate was 13%. Community-onset BSI is associated with a major burden of illness. These data support ongoing and future preventative and research efforts aimed at reducing the major impact of these infections.


Asunto(s)
Infecciones Comunitarias Adquiridas/epidemiología , Sepsis/epidemiología , Adolescente , Adulto , Factores de Edad , Anciano , Anciano de 80 o más Años , Canadá/epidemiología , Niño , Preescolar , Infecciones Comunitarias Adquiridas/mortalidad , Femenino , Hospitalización/estadística & datos numéricos , Humanos , Incidencia , Lactante , Recién Nacido , Masculino , Persona de Mediana Edad , Factores de Riesgo , Sepsis/mortalidad , Análisis de Supervivencia , Adulto Joven
9.
J Clin Microbiol ; 49(8): 3082-4, 2011 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-21653773

RESUMEN

We describe a case of Negativicoccus succinicivorans bacteremia in an adult man with hemochromatosis and acute pancreatitis. Conventional phenotypic tests and commercial identification systems failed to definitively identify the tiny anaerobic Gram-negative coccus isolated from two sets of blood cultures. The bacterium was identified by 16S rRNA gene sequencing and analysis using the SmartGene Integrated Database Network System software. This is the first published report of the recovery of this organism from a patient with invasive infection.


Asunto(s)
Bacteriemia/diagnóstico , Bacteriemia/microbiología , Hemocromatosis/complicaciones , Hemocromatosis/diagnóstico , Pancreatitis Aguda Necrotizante/complicaciones , Pancreatitis Aguda Necrotizante/diagnóstico , Veillonellaceae/aislamiento & purificación , Bacteriemia/complicaciones , Técnicas Bacteriológicas , Sangre/microbiología , Análisis por Conglomerados , ADN Bacteriano/química , ADN Bacteriano/genética , ADN Ribosómico/química , ADN Ribosómico/genética , Humanos , Masculino , Persona de Mediana Edad , Datos de Secuencia Molecular , Filogenia , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN , Veillonellaceae/clasificación , Veillonellaceae/genética
10.
Infection ; 39(5): 405-10, 2011 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-21706223

RESUMEN

PURPOSE: Although bloodstream infection is widely recognized as an important cause of acute morbidity and mortality, long-term mortality outcomes are less well defined. The objective of this study was to define the early (≤28 days) and late (>28 days) mortality and assess determinants of late death following community-onset bloodstream infection. METHODS: All adult residents of the Calgary Zone who had community-onset bloodstream infections during the period 1 January 2003 and 31 December 2007 were included. The mortality outcome was assessed through to 31 December 2008. RESULTS: A total of 4,553 cases were identified, of which 2,105 (46%) were healthcare-associated and 2,448 (54%) were community-acquired. The 28-day, 90-day, and 365-day all-cause case-fatality rates were 561/4,553 (12%), 780/4,553 (17%), and 1,131 (25%), respectively. Within the first 28 days, the median time to death was 4 (interquartile range [IQR] 1-12) days, with 158 (28%) and 212 (38%) of early (≤28-day) deaths occurring by days 1 and 2, respectively. Among survivors to 28 days (n = 3,992), 570 (14%) suffered late 1-year mortality (i.e., death occurred between 29 and 365 days postinception). The most common causes of death in this cohort as listed by the vital statistics data were malignancy in 220 (39%), cardiovascular in 135 (24%), and infection-related in 37 (7%). Older age, higher Charlson score, prolonged initial admission duration, and healthcare-associated and polymicrobial infections were independently associated with late 1-year mortality. CONCLUSIONS: Community-onset bloodstream infection is associated with major early and late mortality.


Asunto(s)
Bacteriemia/epidemiología , Bacteriemia/mortalidad , Infecciones Comunitarias Adquiridas/epidemiología , Infecciones Comunitarias Adquiridas/mortalidad , Adulto , Anciano , Anciano de 80 o más Años , Alberta/epidemiología , Bacteriemia/sangre , Bacteriemia/microbiología , Ciudades , Estudios de Cohortes , Infecciones Comunitarias Adquiridas/sangre , Infecciones Comunitarias Adquiridas/microbiología , Femenino , Humanos , Modelos Logísticos , Masculino , Persona de Mediana Edad , Análisis Multivariante , Factores de Tiempo , Adulto Joven
11.
Infection ; 38(1): 25-32, 2010 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-20012908

RESUMEN

BACKGROUND: Detailed population-based data on the epidemiology of Pseudomonas aeruginosa bloodstream infections are sparse. We sought to describe the incidence rate, risk factors, and outcomes associated with P. aeruginosa bacteremia in a large Canadian health region. PATIENTS AND METHODS: A retrospective population-based surveillance for P. aeruginosa bacteremia was conducted in the Calgary Health Region (CHR, population:approx. 1.2 million) during the period from 2000 to 2006. RESULTS: A total of 284 incident cases of P. aeruginosa bacteremia were identified in CHR residents, corresponding to an annual incidence rate of 3.6/100,000.Nosocomial acquisition accounted for 45% of cases,healthcare-associated community onset for 34% of cases,and community-acquired (CA) cases for 21%. Relative to the general population, risk factors for blood stream infection included male sex, increasing age, hemodialysis,solid organ transplant, diagnosis of cancer, heart disease, HIV infection, diabetes mellitus, and/or chronic obstructive airway disease (COPD). Overall mortality was 29%. Factors associated with mortality in univariate analysis included pulmonary focus of infection and co-morbidities, including chronic liver disease, substance abuse, heart disease, COPD, and cancer, and increased with the burden of co-morbidities. Despite those patients with CA disease having fewer co-morbidities,they had a significantly higher mortality rate than either healthcare-associated cases or nosocomial cases(RR 1.88, p = 0.05). CONCLUSIONS: This study documents that P. aeruginosa bacteremic disease is responsible for a significant burden of illness in general populations and identifies those groups at increased risk of infection and subsequent mortality. This information can be used to identify those individuals likely to benefit from empiric anti-pseudomonal therapies.


Asunto(s)
Bacteriemia/epidemiología , Bacteriemia/microbiología , Infecciones por Pseudomonas/epidemiología , Pseudomonas aeruginosa/aislamiento & purificación , Adolescente , Adulto , Anciano , Anciano de 80 o más Años , Canadá/epidemiología , Niño , Preescolar , Infecciones Comunitarias Adquiridas/epidemiología , Infecciones Comunitarias Adquiridas/microbiología , Infección Hospitalaria/epidemiología , Infección Hospitalaria/microbiología , Femenino , Humanos , Incidencia , Lactante , Recién Nacido , Masculino , Persona de Mediana Edad , Estudios Retrospectivos , Factores de Riesgo , Adulto Joven
12.
Diagn Microbiol Infect Dis ; 57(4): 379-85, 2007 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-17240104

RESUMEN

Calgary Laboratory Services, Alberta, Canada, provides microbiology services via a centralized laboratory to the Calgary Health Region. A selective genital Chlamydia trachomatis (CT)/Neisseria gonorrhoeae (GC) testing policy for women >35 years was implemented. The changes in physician ordering practice, the rate of detection of infections, and the test turnaround times were monitored. The volume of tests, the cost/test, and the total service costs accrued in the year before and after this policy change were compared. An immediate impact was a 30% decrease in tests performed due to the laboratory rejecting samples from older women. Subsequently, physicians' practice changed so that tests were ordered when test criteria were met. Detection rates did not change in any age group. A 27.9% decrease in the total service costs resulted in a labor reduction of 0.2 FTE. Selective testing of women >35 years with a low prevalence of CT/GC infection is clinically relevant and cost-effective.


Asunto(s)
Infecciones por Chlamydia/diagnóstico , Chlamydia trachomatis/aislamiento & purificación , Gonorrea/diagnóstico , Neisseria gonorrhoeae/aislamiento & purificación , Programas Médicos Regionales , Adolescente , Adulto , Factores de Edad , Alberta/epidemiología , Niño , Infecciones por Chlamydia/epidemiología , Infecciones por Chlamydia/microbiología , Femenino , Gonorrea/epidemiología , Gonorrea/microbiología , Humanos , Laboratorios , Microbiología , Persona de Mediana Edad , Programas Médicos Regionales/normas , Programas Médicos Regionales/estadística & datos numéricos , Medición de Riesgo , Frotis Vaginal
14.
Clin Microbiol Infect ; 12(3): 224-30, 2006 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-16451408

RESUMEN

Pyogenic streptococci are a major cause of invasive infection. This study presents the results of a population-based laboratory surveillance for invasive pyogenic streptococcal infections among residents of the Calgary Health Region (population 1 million) between 1 July 1999 and 30 June 2004. The overall annual incidence rate was 18.65/100,000 population, with isolates belonging to the Streptococcus milleri group forming the most important aetiology (incidence of 8.65/100,000 population). Invasive infection with groups A, B, G and C streptococci occurred at annual rates of 4.27, 3.13, 1.83 and 0.41/100,000 population, respectively. There was a close relationship between increasing age and development of an invasive pyogenic streptococcal infection, and the incidence of infection was higher among males than among females. Differences in the seasonal occurrence and focus of infection occurred between the different groups.


Asunto(s)
Infecciones Estreptocócicas/epidemiología , Adolescente , Adulto , Factores de Edad , Anciano , Anciano de 80 o más Años , Bacteriemia , Canadá/epidemiología , Niño , Preescolar , Humanos , Incidencia , Lactante , Recién Nacido , Persona de Mediana Edad , Vigilancia de la Población , Factores de Riesgo , Factores Sexuales , Infecciones Estreptocócicas/microbiología , Streptococcus/aislamiento & purificación , Streptococcus milleri (Grupo)/aislamiento & purificación , Streptococcus pyogenes/aislamiento & purificación
15.
J Hosp Infect ; 63(2): 124-32, 2006 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-16621137

RESUMEN

Intensive care unit-acquired (ICU-acquired) bloodstream infections (BSI) are an important complication of critical illness. The objective of this study was to quantify the excess length of stay, mortality and cost attributable to ICU-acquired BSI. A matched cohort study was conducted in all adult ICUs in the Calgary Health Region between 1 May 2000 and 30 April 2003. One hundred and forty-four patients with ICU-acquired BSI were matched (1:1) to patients without ICU-acquired BSI. Patients with ICU-acquired BSI had a significantly increased median length of ICU stay {15.5 [interquartile range (IQR) 8-26] days vs 12 [IQR 7-18.5] days, P=0.003} and median costs of hospital care [85,137 dollars (IQR 45,740-131,412 dollars) vs 67,879 dollars (IQR 35,043-115,915 dollars, P=0.02) compared with patients without ICU-acquired BSI. The median excess length of ICU stay was two days and the median cost attributable to ICU-acquired BSI was 12,321 dollars per case. Sixty (42%) of the cases died compared with 37 (26%) of the controls [P=0.002, attributable mortality 16%, 95% confidence interval (CI) 5.9-26.0%]. Patients with ICU-acquired BSI were at increased risk for in-hospital death (odds ratio=2.64, 95%CI 1.40-5.29). Among survivor-matched pairs, the median excess lengths of ICU and hospital stay attributable to development of ICU-acquired BSI were two and 13.5 days, respectively, and the attributable cost due to ICU-acquired BSI was 25,155 dollars per case survivor. Critically ill patients who develop ICU-acquired BSI suffer excess morbidity and mortality, and incur significantly increased healthcare costs. These data support expenditures on infection prevention and control programmes and further research into reducing the impact of these infections.


Asunto(s)
Infección Hospitalaria/economía , Infección Hospitalaria/mortalidad , Costos de Hospital , Unidades de Cuidados Intensivos/economía , Sepsis/economía , Sepsis/mortalidad , Anciano , Alberta/epidemiología , Estudios de Casos y Controles , Estudios de Cohortes , Costo de Enfermedad , Femenino , Mortalidad Hospitalaria , Humanos , Tiempo de Internación , Masculino , Análisis por Apareamiento , Persona de Mediana Edad
16.
Transplantation ; 68(9): 1305-11, 1999 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-10573068

RESUMEN

BACKGROUND: The early detection of cytomegalovirus (CMV) after liver transplantation may form the basis of a preemptive strategy for prevention of active CMV disease. METHODS: We prospectively analyzed the clinical use of weekly quantitative polymerase chain reaction-(PCR) based plasma viral load determinations and the antigenemia assay for predicting the development of active CMV disease in 97 consecutive liver transplant recipients. RESULTS: CMV disease occurred in 21/97 patients. Using a positive cut-off of >400 copies/ml plasma, PCR had a sensitivity of 100%, specificity 47.4%, positive predictive value 34.4% and negative predictive value 100% for prediction of CMV disease. Respective values for a positive antigenemia (>0 positive cells/slide) were 95.2, 55.3, 37.0, and 97.7%. Different cut-off points for a positive test were analyzed using receiver-operating characteristic (ROC) curves. The optimal cut-off for viral load was in the range of 2000-5000 copies/ml (sensitivity 85.7%, specificity 86.8%, PPV 64.3%, NPV 95.7% for >5000 copies/ml). The optimal cut-off for antigenemia was in the range of four to six positive cells/slide. Mean peak viral load in symptomatic patients was 73,715 copies per/ml versus 3615 copies/ml in patients with asymptomatic CMV reactivation (P<0.001). In a multivariate logistic regression analysis of risk factors for CMV disease (CMV serostatus, acute rejection, and induction immunosuppression), peak viral load and peak antigenemia emerged as the only significant independent predictors of CMV disease (for PCR, odds ratio=1.40/1000 copy/ml increase in viral load, P=0.0001; for antigenemia odds ratio=1.17/1 positive cell/slide). CONCLUSIONS: Plasma viral load by quantitative PCR is useful for predicting CMV disease and could be used in a preemptive strategy.


Asunto(s)
Infecciones por Citomegalovirus/virología , Citomegalovirus/aislamiento & purificación , Trasplante de Hígado/efectos adversos , Adolescente , Adulto , Anciano , Antígenos Virales/sangre , Infecciones por Citomegalovirus/prevención & control , Femenino , Humanos , Masculino , Persona de Mediana Edad , Análisis Multivariante , Reacción en Cadena de la Polimerasa , Estudios Prospectivos , Viremia/virología
17.
Pediatr Infect Dis J ; 16(4): 364-9, 1997 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-9109137

RESUMEN

OBJECTIVE: To investigate the relationship between Ureaplasma urealyticum and Chlamydia trachomatis colonization of the very low birth weight infant and the development of bronchopulmonary dysplasia (BPD). METHODS: Endotracheal and/or nasopharyngeal aspirates and clinical data were obtained prospectively from 108 infants with a birth weight of < 1501 g and analyzed for U. urealyticum and C. trachomatis by culture and polymerase chain reaction (PCR). RESULTS: U. urealyticum was detected by culture in 40 (37%) infants and by PCR in 49 (45%) infants on at least one occasion. BPD was present at 28 days in 26 of 40 (65%) U. urealyticum culture-positive infants and 39 of 68 (57%) culture-negative infants (relative risk (RR) 1.13, 95% confidence interval 0.83 to 1.54; P = 0.538). BPD was present at 28 days in 34 of 49 (69%) U. urealyticum PCR-positive infants and in 31 of 59 (53%) PCR-negative infants (RR 1.32, 95% confidence interval 0.97 to 1.79; P = 0.135). At 36 weeks postconceptional age culture-positive or PCR-positive infants were at no greater risk of BPD than infants with negative results (RR = 1.02, P = 0.92 and RR = 1.2, P = 0.523, respectively). In addition the presence of U. urealyticum was not associated with any significant difference in the length of hospital stay, days of ventilation, days of oxygen supplementation, birth weight or gestational age. C. trachomatis was detected in only 2 infants. CONCLUSION: C. trachomatis was found infrequently in the airways of premature very low birth weight infants. U. urealyticum was frequently detected but its presence was not significant with regard to development of BPD, duration of ventilatory support, oxygen dependency and length of hospital stay.


Asunto(s)
Displasia Broncopulmonar/microbiología , Infecciones por Chlamydia/diagnóstico , Chlamydia trachomatis/aislamiento & purificación , Infecciones por Ureaplasma/diagnóstico , Ureaplasma urealyticum/aislamiento & purificación , Peso al Nacer , Displasia Broncopulmonar/terapia , Chlamydia trachomatis/crecimiento & desarrollo , Femenino , Hospitalización , Humanos , Recién Nacido , Masculino , Nasofaringe/microbiología , Terapia por Inhalación de Oxígeno , Reacción en Cadena de la Polimerasa , Respiración Artificial , Succión , Tráquea/microbiología , Ureaplasma urealyticum/crecimiento & desarrollo
18.
Infect Control Hosp Epidemiol ; 21(11): 724-7, 2000 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-11089657

RESUMEN

OBJECTIVE: The purpose of the study was to determine the incidence and risk factors for the acquisition of methicillin-resistant Staphylococcus aureus (MRSA) in our community. DESIGN: This study used a cross-sectional design to assess patients colonized or infected with MRSA. PATIENTS: The study population consisted of residents of London, Ontario, Canada, who were identified as MRSA-positive for the first time in 1997. SETTING: All acute- and chronic-care hospitals, long-term healthcare facilities, and community physicians' offices in the city of London participated in the study. MAIN OUTCOME MEASURE: Incidence of MRSA in the community, risk factors for acquisition, especially previous hospitalization over a defined period, and strain type were evaluated. RESULTS: In 1997, 331 residents of London were newly identified as MRSA-positive, representing an annual incidence of 100/100,000 persons (95% confidence interval, 88.8-110.7). Thirty-one (9.4%) individuals were not healthcare-facility patients in the previous month, and 11 (3.3%), 10 (3.0%), and 6 (1.8%) individuals had no such contact in the previous 3, 6, and 12 months, respectively. One hundred seventy-seven strains, including five of the isolates from patients with no healthcare-facility contact in the previous year, were typed. One hundred sixty (90.3%) of these isolates, including all typed strains from patients with no healthcare facility contact, belonged to a single clone. CONCLUSION: These findings demonstrate that the incidence of MRSA is higher than previously reported and that hospital contact is the single most important risk factor for the acquisition of MRSA in our community. Screening for MRSA in previously hospitalized patients at the time of hospitalization may reduce nosocomial spread and indirectly reduce the incidence of MRSA in the community.


Asunto(s)
Resistencia a la Meticilina , Vigilancia de la Población , Infecciones Estafilocócicas/epidemiología , Staphylococcus aureus/efectos de los fármacos , Adulto , Distribución por Edad , Anciano , Anciano de 80 o más Años , Niño , Infecciones Comunitarias Adquiridas/epidemiología , Infección Hospitalaria/epidemiología , Estudios Transversales , Femenino , Hospitalización , Humanos , Incidencia , Masculino , Ontario/epidemiología , Estudios Prospectivos , Factores de Riesgo , Distribución por Sexo , Infecciones Estafilocócicas/transmisión , Staphylococcus aureus/aislamiento & purificación
19.
J Hosp Infect ; 58(2): 137-45, 2004 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-15474185

RESUMEN

Bloodstream infection (BSI) is a serious complication of critical illness but it is uncertain whether acquisition of BSI in the intensive care unit (ICU) increases the risk of death. A study was conducted among all Calgary health region (population approximately 1 million) adults admitted to ICUs for 48 h or more during a three-year period to investigate the occurrence, microbiology and risk factors for developing an ICU-acquired BSI and to determine whether these infections independently predict mortality. One hundred and ninety-nine ICU-acquired BSI episodes occurred during 4933 ICU admissions for a cumulative incidence of 4% and an incidence density of 5.4 per 1000 ICU days. The most common isolates were Staphylococcus aureus (18%), coagulase-negative staphylococci (11%), and Enterococcus faecalis (8%); 12% of infections were due to antimicrobial-resistant bacteria. Admission to the regional neurosurgery/trauma ICU [odds ratio (OR) 2.86; 95% confidence interval (CI) 2.10-3.90] and increasing Acute Physiology and Chronic Health Evaluation II (APACHE II) score (OR 1.05 per point, 95% CI 1.03-1.07) were associated with higher risk, whereas a surgical diagnosis (OR 0.69; 95% CI 0.52-0.93) was associated with lower risk of developing ICU-acquired BSI in logistic regression analysis. The crude in-hospital death rate was 45% for patients with ICU-acquired BSI compared with 21% for those without (P < 0.0001) Development of an ICU-acquired BSI was an independent risk factor for death (OR 1.79; 95% CI 1.3-2.5) and increases the risk of dying from critical illness.


Asunto(s)
Bacteriemia/epidemiología , Infección Hospitalaria/epidemiología , APACHE , Adulto , Anciano , Alberta/epidemiología , Bacteriemia/etiología , Bacteriemia/microbiología , Bacteriemia/mortalidad , Bacterias Anaerobias/aislamiento & purificación , Candida/aislamiento & purificación , Estudios de Cohortes , Enfermedad Crítica , Infección Hospitalaria/etiología , Infección Hospitalaria/microbiología , Infección Hospitalaria/mortalidad , Farmacorresistencia Bacteriana , Femenino , Bacterias Gramnegativas/aislamiento & purificación , Bacterias Grampositivas/aislamiento & purificación , Humanos , Control de Infecciones/métodos , Unidades de Cuidados Intensivos , Masculino , Persona de Mediana Edad , Admisión del Paciente/estadística & datos numéricos , Factores de Riesgo
20.
Can J Infect Dis ; 5(1): 33-6, 1994 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-22346479

RESUMEN

Classically, a swollen, painful joint in a patient with hemophilia has been considered to be due to a hemarthrosis until otherwise proven, and treated immediately with appropriate coagulation factor replacement. Two cases of human immunodeficiency virus (hiv)-infected hemophiliacs presenting with an initial apparent hemarthrosis, complicated subsequently by numerous pyarthroses and sepsis are described. In light of the prevalence of hiv infection in the adult hemophiliac population with arthropathy, a reappraisal of the clinical caveat of immediate infusion without joint aspiration is required.

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