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Air-stable dinuclear complexes [(bmsab)NiII(tmsab)NiII(bmsab)]3- and [(bmsab)ZnII(tmsab)ZnII(bmsab)]3- (bmsab = bis(methanesulfoneamido)benzene, tmsab = tetra(methanesulfonamido)benzene) were prepared via a synthetic route based on heteroleptic precursor complexes. The new complexes combine a distorted tetrahedral coordination environment with an open-shell bridging ligand. The ZnII species was subjected to a detailed investigation of the (spectro-)electrochemical processes. The NiII species is a rare example of a complex that combines strong exchange coupling (J > 440 cm-1) with pronounced positive zero-field splitting (D = +72 cm-1). Combining SQUID magnetometry and (HF)EPR spectroscopy with ab initio calculations allowed for accurate quantification of the exchange interaction.
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Off-loading visualization and interaction into virtual reality (VR) using head-mounted displays (HMDs) has gained considerable popularity in simulation sciences, particularly in chemical modeling. Because of its unique way of soft immersion, augmented reality (AR) HMD technology has even more potential to be integrated into the everyday workflow of computational chemists. In this work, we present our environment to explore the prospects of AR in chemistry and general molecular sciences: The chemistry in Augmented Reality package (chARpack). Besides providing an extensible framework, our software focuses on a seamless transition between a 3D stereoscopic view with true 3D interactions and the traditional desktop PC setup to provide users with the best setup for all tasks in their workflow. Using feedback from domain experts, we discuss our design requirements for this kind of hybrid working environment (AR + PC), regarding input, features, degree of immersion, and collaboration.
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Realidad Aumentada , Programas Informáticos , Realidad Virtual , Interfaz Usuario-ComputadorRESUMEN
Cyclohepta[def]fluorene 1 and its derivatives have received considerable attention due to possible technological applications as molecular devices. Despite efforts from both theory and experiment, the electronic structure of 1 has remained unclear. Herein, we report advanced first-principles calculations on 1 using a multireference and a coupled-cluster method. We confirm a bistability of 1 between a polar singlet state and a non-polar triplet state. We also study the effects of benzo-extension on the electronic structure and the influences of substitution and solvation on the ground state. Our results suggest that deliberate choice of substituents allows to toggle the multiplicity of the ground state. We also propose that due to its bistability, 1 represents an attractive building block for molecular devices.
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A new implementation of the internally contracted multireference coupled-cluster with singles and doubles (icMRCCSD) method is presented. The new code employs an efficient tensor contraction kernel and can also avoid full four-external integral transformations, which significantly extends the scope of the applicability of icMRCCSD. The new implementation is currently restricted to the simple case of two active electrons in two orbitals and also supports the computation of spin-adapted doublet and triplet coupled-cluster wavefunctions. This contribution describes the basic approach for the automated derivation of working equations and benchmarks the current code against efficient implementations of standard methods, such as single-reference coupled-cluster singles and doubles (CCSD) and internally contracted multireference configuration interaction (icMRCI). Run times for linearized variants of icMRCCSD are only twice as long as comparable CCSD runs and similar to those of the icMRCI implementation, while non-linear terms of more complete variants of icMRCCSD lead to an order of magnitude longer computation times. Nevertheless, the new code allows for computations at larger scales than it was possible previously, with less demands on memory and disk-space resources. This is exemplified by numerical structure optimizations and harmonic force field determinations of NC2H5 isomers and the singlet and triplet states of m-benzyne. In addition, the exchange coupling of a dinuclear copper complex is determined. This work also defines a new commutator approximation for icMRCCSD, which includes all terms that are also present in the single-reference CCSD method, thus yielding a consistent pair of single-reference and multireference coupled-cluster methods.
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Unitary cluster expansions of the electronic wavefunction have recently gained much interest because of their use in conjunction with quantum algorithms. In this contribution, we investigate some aspects of an ansatz, using generalized two-body excitation operators, which have been considered in some recent studies on quantum algorithms for quantum chemistry. Our numerical results show that, in particular, two-body operators with effective particle-hole excitation level of one in connection with the usual particle-hole double excitation operators lead to a very accurate, yet compact representation of the wavefunction. Generalized two-body operators with effective excitation rank zero have a considerably less pronounced effect. We compare with standard and unitary coupled-cluster expansions and show that the above mentioned approach matches or even surpasses the accuracy of expansions with three-body particle-hole excitations, in particular at the onset of strong correlation. A downside of the approach is that it is rather difficult to rigorously converge it to its variational minimum.
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We reveal limitations of several standard coupled-cluster (CC) methods with perturbation-theory based noniterative or approximate iterative treatments of triple excitations when applied to the determination of highly accurate potential energy curves (PECs) of ionic dimers, such as the XΣg+2 electronic ground state of Rb2 +. Such computations are of current interest for the understanding of ion-atom interactions in the ultracold regime. We demonstrate that these CC methods lead to an unphysical long-range barrier for the Rb2 + system. The barrier is small but spoils the long-range behavior of the PEC. The effect is also found for other X2 + systems, such as X = Li, Na, and K. Calculations using a flexible framework for obtaining leading perturbative triples corrections derived using an analytic CC singles and doubles energy derivative formulation demonstrate that the origin of this problem lies in the use of TÌ3 amplitudes obtained from approximate CC singles, doubles, and triples amplitude equations. It is shown that the unphysical barrier is related to a symmetry instability of the underlying Hartree-Fock mean-field solution, leading to orbitals representing two +0.5-fold charged ions in the limit of separated fragments. This, in turn, leads to a wrong 1/R asymptote of the interaction potential computed by perturbation-based CC approximations. Physically meaningful perturbative corrections in the long-range tail of the PEC may instead be obtained using symmetry-broken reference determinants.
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Molpro is a general purpose quantum chemistry software package with a long development history. It was originally focused on accurate wavefunction calculations for small molecules but now has many additional distinctive capabilities that include, inter alia, local correlation approximations combined with explicit correlation, highly efficient implementations of single-reference correlation methods, robust and efficient multireference methods for large molecules, projection embedding, and anharmonic vibrational spectra. In addition to conventional input-file specification of calculations, Molpro calculations can now be specified and analyzed via a new graphical user interface and through a Python framework.
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The first quasi-binary acetonitriletriide Sr3 [C2 N]2 has been synthesised and characterised. The nearly colourless crystals were obtained from the reaction of Sr metal, graphite, and elemental N2 , generated by decomposition of Sr(N3 )2 , in a sealed Ni ampoule with the aid of an alkali metal flux. The structure of this compound was analysed via single-crystal X-ray diffraction and the identity of the [C2 N]3- anion was confirmed by Raman spectroscopy and further investigated by quantum-chemical methods. Computed interatomic distances within the [C2 N]3- anion strikingly match the obtained experimental data.
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Thermotropic ionic liquid crystals based on the flavylium scaffold have been synthesized and studied for their structure-properties relationship for the first time. The mesogens were probed by differential scanning calorimetry (DSC), polarizing optical microscopy (POM), and X-ray diffraction (XRD). Low numbers of alkoxy side chains resulted in smectic (SmA) and lamello-columnar (LamCol ) phases, whereas higher substituted flavylium salts showed Colro as well as ordered and disordered columnar (Colho , Colhd ) mesophases. Mesophase width ranged from 13â K to 220â K, giving access to room temperature liquid crystals. The optical properties of the synthesized compounds were probed towards absorption and emission properties. Strong absorption with maxima between 444 and 507â nm was observed, and some chromophores were highly emissive with quantum yields up to 99 %. Ultimately, mesogenic and dye properties were examined by temperature-dependent emissive experiments in the solid state.
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Linear and quadratic approximations to the internally contracted multireference coupled-cluster (icMRCC) method are implemented and analyzed by using the linked and unlinked coupled-cluster formalisms. This includes methods based on perturbation theory as well as the coupled-electron pair approximation, CEPA(0). The similarities and differences between all the approximations serve to highlight and provoke discussion about methodological peculiarities of the icMRCC ansatz. When calculating potential energy curves (PECs), discontinuities are observed for the linear icMRCC energies. Using a diagrammatic representation, the terms that cause but also reduce these discontinuities are identified. For benchmarking test cases such as calculating PECs, singlet-triplet splittings, and barrier heights, the multireference CEPA(0) approximation performs well; however, it suffers from a lack of size consistency and so cannot represent a step forward to the goal of developing a computationally cheap and accurate icMRCC method.
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The second-order approximate internally contracted multireference coupled-cluster singles and doubles method icMRCC2 is defined and tested. The method is designed to bridge the gap between multireference perturbation theory and single-reference second-order approximate coupled-cluster theory (CC2). By including semi-internal double excitations into the zeroth-order expansion, the new method is able to reliably describe the coupling between excitations within the active space and the entire single-excitation spectrum. This helps, for instance, to provide a balanced treatment of valence and ionic states in polyenes (as explicitly demonstrated for cyclopentadiene) and to arrive at a more complete coverage of the excitation spectrum without the need to include diffuse orbitals into the active space. Good performance is also seen for notoriously difficult molecules such as C2 and CN. Furthermore, the multireference extension removes the main failures of single-reference CC2 theory, such as in the case of ozone.
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The distinguishable cluster approximation applied to coupled cluster doubles equations greatly improves absolute and relative energies. We apply the same approximation to the triples equations and demonstrate that it can also improve the results of the coupled cluster method with singles, doubles, and triples. The resulting method has a nominal computational scaling of O(N7) in the real-space representation, and is orbital invariant, size extensive, and exact for three electrons.
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We report the extended explicitly correlated approximate coupled-cluster singles and doubles CC2(F12*)-XSP method suitable for response properties. Equations are derived using an automated approach and have subsequently been hand-coded into the computer program KOALA, in which for all two-electron integrals, density fitting is employed. Numerical results are presented for the lowest two vertical singlet excitation energies of a set of selected molecules. The results show that the CC2(F12*)-XSP method provides the correct basis-set limit with no bias to the ground state, and an excellent agreement with reference CC2 values using large basis sets is found. Using Dunning's aug-cc-pVTZ basis, the CC2(F12*)-XSP method yields excitation energies which are converged within 1 mEh to the basis-set limit for valence excitations.
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On the example of an aggregate of two perylenebisimide (PBI) molecules the character of the lowest excited electronic states in terms of charge transfer (CT) and Frenkel exciton (FE) configurations is investigated as a function of the intermolecular arrangement. A minimal model Hamiltonian based on two FE and two CT configurations at the frontier-orbitals CIS (FOCIS) level is shown to represent a simple and comprehensible approach providing insight into the physical significance of the model Hamiltonian matrix elements. The recently introduced analysis and diabatization procedure (Liu et al., J. Chem. Phys. 2015, 143, 084106 ) method is used to extract the energies of the configurations and their interactions (the model Hamiltonian parameters) also from the accurate CC2 approach. An analysis in terms of diabatic energy profiles and their interactions shows that the FOCIS parameters give a qualitatively correct description of the adiabatic excited state energy profiles. Comparison with CC2 reveals, however, the presence of avoided crossings at FOCIS level, associated with a large character change (CT/FE) of the excited states as a function of the aggregate structure, which represents the major drawback of FOCIS results. We show that proper amendment of the FOCIS-derived parameters allows to accurately represent the potential energy surfaces and crossings of the excited dimer states as a function of the aggregate structure. © 2018 Wiley Periodicals, Inc.
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Internally contracted multireference coupled-cluster (icMRCC) theory is extended to the computation of first-order properties (expectation values). We use the previously defined Lagrange formulation of the energy functional to derive the required equations for the Lagrange multipliers and arrive at an expression for first-order properties according to the generalized Hellmann-Feynman theorem, analogous to single-reference coupled-cluster theory. The present formulation does not include orbital relaxation, but in line with previous experience in coupled-cluster theory, the single-excitation cluster operator can recover a significant portion of orbital relaxation. Further aspects of the theory that arise from the internal contraction approach are discussed. Using automated derivation techniques, we have implemented a pilot code for icMRCCSD and icMRCCSDT for testing the method numerically. We find good agreement with full configuration interaction for several properties of boron monohydride and dipole moment curves of hydrogen fluoride and chromium hydride. A particular focus is given to spin-dependent properties: The hyperfine coupling tensors of Σ and Π radicals have been computed and compared to experiment and previous computations. We discuss the problem of describing spin polarization with properly spin-adapted wavefunctions, which requires either including pseudo-triple excitations or employing sufficiently flexible reference functions.
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While the title question is a clear "yes" from purely theoretical arguments, the case is less clear for practical calculations with finite (one-particle) basis sets. To shed further light on this issue, the convergence to the basis set limit of CCSD (coupled cluster theory with all single and double excitations) and of different approximate implementations of CCSD-F12 (explicitly correlated CCSD) has been investigated in detail for the W4-17 thermochemical benchmark. Near the CBS ([1-particle] complete basis set) limit, CCSD and CCSD(F12*) agree to within their respective uncertainties (about ±0.04 kcal/mol) due to residual basis set incompleteness error, but a nontrivial difference remains between CCSD-F12b and CCSD(F12*), which is roughly proportional to the degree of static correlation. The observed basis set convergence behavior results from the superposition of a rapidly converging, attractive, CCSD[F12]-CCSD-F12b difference (consisting mostly of third-order terms) and a more slowly converging, repulsive, fourth-order difference between CCSD(F12*) and CCSD[F12]. For accurate thermochemistry, we recommend CCSD(F12*) over CCSD-F12b if at all possible. There are some indications that the nZaPa family of basis sets exhibits somewhat smoother convergence than the correlation consistent family.
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A series of MIDA (N-methylimino diacetic acid) boronates carrying 4-alkoxy, 3,4-bisalkoxy, or 3,4,5-trisalkoxyphenyl substituents were synthesized and their mesomorphic properties characterized by differential scanning calorimetry (DSC), polarizing optical microscopy (POM), and X-ray diffraction (XRD) techniques such as small- and wide-angle X-ray scattering (SAXS and WAXS, respectively). Most derivatives were liquid crystalline. In the case of mono- and bisalkoxy-substituted derivatives, C6 chains already induced smectic A (SmA) mesophases despite the bulky MIDA head group. With increasing chain length, columnar hexagonal (Colh ) phases replaced SmA phases in the disubstituted series. Quantum chemical calculations on a series of MIDA boronates show that the B-N bond is a dative bond with a positive charge on the boron atom and negative charges on the nitrogen and oxygen atoms. In addition, no π-interaction between the aryl moiety and B-N bond was found, thus the mesogenic unit is electronically decoupled from the MIDA head group. These theoretical findings were supported by IR and Raman spectra as well as by asingle crystal structure analysis of 4-ethoxyphenyl MIDA boronate. Calculations of the electrostatic potential of the MIDA boronate reveal a special polarity pattern that can support the formation of a two-dimensional network and is likely to explain the liquid crystalline self-assembly. The absence of any electronic cross-talk between the MIDA head group and B-aryl or B-alkyl substituents allows the efficient tailoring of the mesophase type through variation of the substituents.
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In order to study the impact of regioisomeric diene ligands on the formation and catalytic activity of Rh complexes, a series of C2- and CS-symmetric 2,5-disubstituted bicyclo[3.3.0]octa-2,5-dienes C2-L and CS-L, respectively, were synthesized from Weiss diketone by simultaneous deprotonation/electrophilic trapping of both oxo functions, and the catalytic behavior was studied in the presence of [RhCl(C2H4)2]2. Complexes [RhCl(C2-L)]2 bearing C2-symmetric ligands catalyzed effectively the asymmetric arylation of N-tosylaldimines to (S)-diarylamines with yields and ee values up to 99%. In Hayashi-Miyaura reactions, however, the complexes showed poor catalytic activity. When complexes [RhCl(CS-L)]2 with CS-symmetric ligand or mixtures of [RhCl(C2-L)]2 and [RhCl(CS-L)]2 were employed in 1,2-additions, racemic addition products were observed, suggesting a CâC isomerization of the diene ligands. X-ray crystal structure analysis of both Rh complexes formed from the [RhCl(C2H4)2]2 precursor and ligands C2-L and CS-L revealed that only the C2-symmetric ligand C2-L coordinated to the Rh, whereas CS-L underwent a Rh-catalyzed CâC isomerization to rac-C2-L, which then gave the racemic [RhCl(rac-C2-L)]2 complex. DFT calculations of the relative stabilities of the Rh complexes and the proposed intermediates provided a mechanistic rationale via Rh-mediated hydride transfer.
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We report an implementation for employing the algebraic diagrammatic construction to second order [ADC(2)] ab initio electronic structure level of theory in nonadiabatic dynamics simulations in the framework of the SHARC (surface hopping including arbitrary couplings) dynamics method. The implementation is intended to enable computationally efficient, reliable, and easy-to-use nonadiabatic dynamics simulations of intersystem crossing in organic molecules. The methodology is evaluated for the 2-thiouracil molecule. It is shown that ADC(2) yields reliable excited-state energies, wave functions, and spin-orbit coupling terms for this molecule. Dynamics simulations are compared to previously reported results using high-level multi-state complete active space perturbation theory, showing favorable agreement.
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In order to construct the functionalized AB ring system of clifednamide, member of the class of macrocyclic tetramic acid lactams, a synthesis was developed which utilized an Ireland-Claisen rearrangement and an intramolecular Diels-Alder reaction. Starting from di-O-isopropylidene-d-mannitol the allyl carboxylate precursor for the sigmatropic rearrangement was prepared. This rearrangement proceeded diastereoselectively only in the presence of an allyl silyl ether instead of the parent enone in the side chain, as suggested by deuteration experiments. A subsequent Diels-Alder reaction yielded the target ethyl hexahydro-1H-indene-carboxylate with high diastereoselectivity. Quantum-chemical investigations of this intramolecular Diels-Alder reaction support the proposed configuration of the final product.