Metacommunity ecology meets biogeography: effects of geographical region, spatial dynamics and environmental filtering on community structure in aquatic organisms.

Metacommunity patterns and underlying processes in aquatic organisms have typically been studied within a drainage basin. We examined variation in the composition of six freshwater organismal groups across various drainage basins in Finland. We first modelled spatial structures within each drainage basin using Moran eigenvector maps. Second, we partitioned variation in community structure among three groups of predictors using constrained ordination: (1) local environmental variables, (2) spatial variables, and (3) dummy variable drainage basin identity. Third, we examined turnover and nestedness components of multiple-site beta diversity, and tested the best fit patterns of our datasets using the "elements of metacommunity structure" analysis. Our results showed that basin identity and local environmental variables were significant predictors of community structure, whereas within-basin spatial effects were typically negligible. In half of the organismal groups (diatoms, bryophytes, zooplankton), basin identity was a slightly better predictor of community structure than local environmental variables, whereas the opposite was true for the remaining three organismal groups (insects, macrophytes, fish). Both pure basin and local environmental fractions were, however, significant after accounting for the effects of the other predictor variable sets. All organismal groups exhibited high levels of beta diversity, which was mostly attributable to the turnover component. Our results showed consistent Clementsian-type metacommunity structures, suggesting that subgroups of species responded similarly to environmental factors or drainage basin limits. We conclude that aquatic communities across large scales are mostly determined by environmental and basin effects, which leads to high beta diversity and prevalence of Clementsian community types.

Interface Effects of Strain-Energy Potentials on Phase Transition Characteristics of VO2 Thin-Films.

Metal-insulator-transition (MIT) of VO2 has attracted strong attention as a potential phenomenon to be utilized in nanostructured devices. Dynamics of MIT phase transition determines the feasibility of VO2 material properties in various applications, for example, photonic components, sensors, MEMS actuators, and neuromorphic computing. However, conventional interface strain model predicts the MIT effect accurately for bulk, but fairly for the thin films, and thus, a new model is needed. It was found that the VO2 thin film-substrate interface plays a crucial role in determining transition dynamics properties. In VO2 thin films on different substrates, coexistence of insulator-state polymorph phases, dislocations, and a few unit cell reconstruction layer form an interface structure minimizing strain energy by the increase of structural complexity. As a consequence, MIT temperature and hysteresis of structure increased as the transition enthalpy of the interface increased. Thus, the process does not obey the conventional Clausius-Clapeyron law anymore. A new model is proposed for residual strain energy potentials by implementing a modified Cauchy strain. Experimental results confirm that the MIT effect in constrained VO2 thin films is induced through the Peierls mechanism. The developed model provides tools for strain engineering in the atomic scale for crystal potential distortion effects in nanotechnology, such as topological quantum devices.

Climate warming and pikeperch year-class catches in the Baltic Sea.

Climate change scenarios concerning the Baltic Sea predict increase in surface water temperatures. Pikeperch (Sander lucioperca (L.)) inhabits the coastal areas of the northern Baltic Sea and is an important fish species for the Finnish fisheries. The year-class strength of pikeperch varies strongly between years and significantly depends on water temperature. We aimed to study the effects of changing temperature conditions on pikeperch fisheries and distribution based on commercial catch data from the period 1980-2008 in the Finnish coastal areas of the Baltic Sea. The results indicated that warmer summers will produce stronger pikeperch year-classes that consequently contribute significantly to the future catches. The average temperature in June-July explained 40% of the variation in the year-class catches in the Gulf of Finland and 73% in July-August in the Archipelago Sea. During the study period, the distribution of pikeperch catches expanded toward north along the coasts of the Bothnian Sea.

Fabrication of optical waveguides by imprinting: usage of positive tone resist as a mould for UV-curable polymer.

Optical ridge type waveguides based on UV-curable polymer were fabricated by imprinting method. Positive tone resist patterned on a silicon wafer was used as a mould. The characterization of waveguides was carried out by coupling TE-polarized light from a tapered fiber into a waveguide with 30 mm length and mapping the intensity distribution with another tapered fiber at the output facet of a waveguide. Proper single- or multimode operation was observed depending on the waveguide width being either 2 microm or 6 microm. Experimental observations on the mode profiles were also supported by the simulation results. Average power transmissions of 32% at 1530 nm wavelength and 45% at 1310 nm wavelength were characterized. The results suggest that the simple mould fabrication process might be a useful technique for device prototyping and that the performance of replicated waveguides can meet the requirements for certain applications.

Atmospheric oxidation and carbon contamination of silver and its effect on surface-enhanced Raman spectroscopy (SERS).

Surface-enhanced Raman spectroscopy (SERS) is considered a highly promising technology for different analytical purposes. The applications of SERS are still quite limited due its relatively poor quantitative repeatability and the fact that SERS is very sensitive to oxidation, which is a challenge especially with silver based SERS substrates. Here, the link between these phenomena is investigated by exposing silver SERS substrates to ambient laboratory air. We show that SERS intensity decreases exponentially after the exposure, which consequently leads to an increasing standard deviation (σ) in intensity. Within a five-hour measurement window, the SERS intensity already drops by 60%, while σ triples from 7% to 21%. The SERS results are supplemented by elemental analysis, which shows that oxidation and atmospheric carbon contamination coincide with the rapid SERS intensity decrease. The results emphasize how sensitive SERS is towards atmospheric contamination and how it can also reduce the measurement repeatability - even if the substrates are exposed to air just for a very short period of time.

A comparative analysis of metacommunity types in the freshwater realm.

Most metacommunity studies have taken a direct mechanistic approach, aiming to model the effects of local and regional processes on local communities within a metacommunity. An alternative approach is to focus on emergent patterns at the metacommunity level through applying the elements of metacommunity structure (EMS; Oikos, 97, 2002, 237) analysis. The EMS approach has very rarely been applied in the context of a comparative analysis of metacommunity types of main microbial, plant, and animal groups. Furthermore, to our knowledge, no study has associated metacommunity types with their potential ecological correlates in the freshwater realm. We assembled data for 45 freshwater metacommunities, incorporating biologically highly disparate organismal groups (i.e., bacteria, algae, macrophytes, invertebrates, and fish). We first examined ecological correlates (e.g., matrix properties, beta diversity, and average characteristics of a metacommunity, including body size, trophic group, ecosystem type, life form, and dispersal mode) of the three elements of metacommunity structure (i.e., coherence, turnover, and boundary clumping). Second, based on those three elements, we determined which metacommunity types prevailed in freshwater systems and which ecological correlates best discriminated among the observed metacommunity types. We found that the three elements of metacommunity structure were not strongly related to the ecological correlates, except that turnover was positively related to beta diversity. We observed six metacommunity types. The most common were Clementsian and quasi-nested metacommunity types, whereas Random, quasi-Clementsian, Gleasonian, and quasi-Gleasonian types were less common. These six metacommunity types were best discriminated by beta diversity and the first axis of metacommunity ecological traits, ranging from metacommunities of producer organisms occurring in streams to those of large predatory organisms occurring in lakes. Our results showed that focusing on the emergent properties of multiple metacommunities provides information additional to that obtained in studies examining variation in local community structure within a metacommunity.

Three-dimensional carbon nanotube scaffolds as particulate filters and catalyst support membranes.

Three-dimensional carbon nanotube scaffolds created using micromachined Si/SiO2 templates are used as nanoparticulate filters and support membranes for gas-phase heterogeneous catalysis. The filtering efficiency of better than 99% is shown for the scaffolds in filtering submicrometer particles from air. In the hydrogenation of propene to propane reaction low activation energy of E(a) approximately 27.8 +/- 0.6 kJ x mol(-1), a considerably high turnover rate of approximately 1.1 molecules x Pd site(-1) x s(-1) and durable activity for the reaction are observed with Pd decorated membranes. It is demonstrated that appropriate engineering of macroscopic-ordered nanotube architectures can lead to multifunctional applications.

Latitudinal gradients in niche breadth and position-regional patterns in freshwater fish.

The latitudinal gradient in diversity is widely acknowledged, but the mechanisms contributing to this pattern are still poorly known. Given that the species have environmental optima, a central issue is how species' niche parameters, i.e. niche breadth and niche position, vary along the latitudinal gradient. In this study, we examined the determinants of fish distribution and the variability in species' niche breadth and position along latitudinal gradient using a regional data set of boreal lakes. Results of the Outlying Mean Index analysis showed that the fish community structure was jointly controlled by a number of environmental factors, ranging from water chemistry and temperature to local physical factors such as lake area and depth. Corroborating the number of earlier findings, the regional occupancy of species was more strongly governed by the niche position than the niche breadth, although both showed a significant relationship with the regional distribution. When the latitudinal variability in niche parameters of the main taxonomic groups was analysed, both percids and cyprinids, being cool water species, showed significant decrease in niche breadth northwards as we predicted. By contrast, the niche position and latitude were non-significantly correlated in percids and salmonids, and negatively correlated in cyprinids, the latter showing the opposite pattern as we predicted. However, even if only a part of our predictions was supported, the results generally implied that the examination of latitudinal variability in the niche properties is potentially highly rewarding, not only in estimation of present community structure in lakes but also for predictions of species' responses to climate change.

Effects of clay turbidity and density of pikeperch (Sander lucioperca) larvae on predation by perch (Perca fluviatilis).

Increased turbidity reduces visibility in the water column, which can negatively affect vision-oriented fish and their ability to detect prey. Young fish could consequently benefit from high turbidity levels that can provide a protective cover, reducing predation pressure. Perch (Perca fluviatilis) are commonly found in littoral zones of temperate lakes and coastal areas of the Baltic Sea. Pikeperch (Sander lucioperca) spawn in these areas, so perch is a potential predator for pikeperch larvae. We conducted laboratory experiments to test the predation of perch on pikeperch larvae at different turbidity levels (5-85 nephelometric turbidity units), densities of pikeperch larvae (2-21 individuals l(-1)) and volumes of water (10-45 l). The logistic regression showed that the probability of larvae eaten depended significantly on turbidity and volume of water in the bags, while density of larvae was not significant. However, because container size is known to affect predation, the data was divided into two groups based on water volume (10-20 and 25-45 l) to reduce the effects of container size. In either group, probability of predation did not significantly depend on volume, whereas turbidity was significant in both groups, while density was significant in larger water volumes. Thus, high turbidity impaired perch predation and protected pikeperch larvae from perch predation. Because density of larvae was also a significant factor affecting predation of perch, the dispersal of pikeperch larvae from spawning areas should also increase the survival of larvae.