Draft Genome Sequence of Cyanobacterium sp. Strain HL-69, Isolated from a Benthic Microbial Mat from a Magnesium Sulfate-Dominated Hypersaline Lake.

The complete genome sequence of Cyanobacterium sp. strain HL-69 consists of 3,155,247 bp and contains 2,897 predicted genes comprising a chromosome and two plasmids. The genome is consistent with a halophilic nondiazotrophic phototrophic lifestyle, and this organism is able to synthesize most B vitamins and produces several secondary metabolites.

De novo synthesis of alkyne substituted tryptophans as chemical probes for protein profiling studies.

De novo synthesis of alkynalted tryptophan moieties as chemical probes for protein profilling studies, via an unexpected synthesis of Michael acceptor 12 is reported. Friedel Craft's alkylation of 12 and alkyne substituted indoles gave alkynalated tryptophan moieties, which perform as chemical probe by incorporating into actively translating Escherichia coli cells, whereby the alkyne moiety enables multimodal analyses through click chemistry mediated attachment of reporting groups.

Screening for asbestos-related pleural disease with digital storage phosphor radiography.

Digital storage phosphor radiography (SR) has a wide dynamic range and unique postprocessing capabilities that may improve the performance of screening studies for asbestos-related pleural disease compared with conventional film radiography (FR). In a group of 32 asbestos-exposed and nine control subjects with established pleural data, we compared the screening performance of FR and SR obtained with a single isoexposure, dual-energy technique (system resolution 0.2 mm, 10 bits). Performance was evaluated for 7320 observations by eight readers using a paired t test (P less than .02 with Bonferroni correction) of averaged receiver operating characteristic curve (ROC) areas (Az +/- standard error). We found that SR alone and SR supplemented by dual-energy soft-tissue and calcium images (SRde) were superior to FR in the overall detection of pleural abnormalities (Az = 0.90 +/- 0.01, 0.90 +/- 0.01, and 0.88 +/- 0.01, respectively). In the specific detection of pleural calcification, SRde was superior to FR (Az = 0.91 +/- 0.01 and 0.87 +/- 0.01, respectively; P less than 0.01). Analysis of variance indicated that SRde most closely reproduced an established pleural score based on the International Labor Organization (ILO) classification of the pneumoconioses (P less than 0.05, Scheffé's multiple comparison test). We conclude that isodose SR performs at least as well as FR in screening for asbestos-related pleural disease. SR supplemented by dual-energy images might improve the specific detection of pleural calcifications compared with FR.

Interstitial lung disease: impact of postprocessing in digital storage phosphor imaging.

The ability to resolve the fine linear structures of interstitial lung disease is one measure of the limiting performance characteristics of an imaging system. Conventional screen-film radiography was compared with six algorithms of isodose storage phosphor digital radiography (0.2-mm x 10-bit pixel matrix) in the detection of interstitial lung abnormality documented by means of computed tomography in 40 patients with abnormalities and 25 healthy control subjects. Performance was evaluated with an analysis of variance (the Fisher paired comparison test; P less than .05) of the average receiver operating characteristic area of 2,730 observations by six readers. The moderately and the more markedly high-frequency edge-enhanced algorithms of storage phosphor digital radiographs were equivalent in performance to screen-film radiography. The default mode, low- and medium-frequency edge-enhanced algorithms, and gray scale reversed mode of storage phosphor digital radiography were inferior to screen-film radiography. The authors conclude that high-frequency edge-enhanced algorithms can perform as well as screen-film radiography in the detection of interstitial disease.

Mediastinal abnormalities: detection with storage phosphor digital radiography.

Conventional film radiography (FR) and six postprocessing algorithms of isodose storage phosphor digital radiography (SR) (0.2-mm X 10-bit pixel matrix) were compared in the evaluation of 40 mediastinal and 30 pulmonary lesions in 60 patients who underwent computed tomography of the chest. The six SR algorithms varied among each other in only one image parameter. One algorithm approximated conventional image characteristics. The other five algorithms were designed to optimize imaging of the mediastinum and tested the effects of gray-scale reversal, adjustment of optical density, a linear instead of a sigmoid gradation curve, and moderate edge enhancement of high and medium spatial frequencies. Performance was evaluated by calculating the average area under the receiver operating characteristic curve (Az) of 5,040 observations by six readers. Post-processing with high-frequency edge enhancement and density optimization for the mediastinum significantly improved performance of SR over FR in the detection of mediastinal lesions (Az = .80 +/- .02 vs .73 +/- .01, respectively). Gray-scale reversal significantly decreased performance (Az = .64 +/- .03). All SR algorithms that were postprocessed to optimize imaging of the mediastinum were significantly inferior to FR in the detection of pulmonary lesions.