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1.
Comput Methods Programs Biomed ; 237: 107583, 2023 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-37167882

RESUMEN

BACKGROUND AND OBJECTIVES: Hematologic malignancies, including the associated multiple subtypes, are critically threatening to human health. The timely detection of malignancies is crucial for their effective treatment. In this regard, the examination of bone marrow smears constitutes a crucial step. Nonetheless, the conventional approach to cell identification and enumeration is laborious and time-intensive. Therefore, the present study aimed to develop a method for the efficient diagnosis of these malignancies directly from bone marrow microscopic images. METHODS: A deep learning-based framework was developed to facilitate the diagnosis of common hematologic malignancies. First, a total of 2033 microscopic images of bone marrow analysis, including the images for 6 disease types and 1 healthy control, were collected from two Chinese medical websites. Next, the collected images were classified into the training, validation, and test datasets in the ratio of 7:1:2. Subsequently, a method of stain normalization to multi-domains (stain domain augmentation) based on the MultiPathGAN model was developed to equalize the stain styles and expand the image datasets. Afterward, a lightweight hybrid model named MobileViTv2, which integrates the strengths of both CNNs and ViTs, was developed for disease classification. The resulting model was trained and utilized to diagnose patients based on multiple microscopic images of their bone marrow smears, obtained from a cohort of 61 individuals. RESULTS: MobileViTv2 exhibited an average accuracy of 94.28% when applied to the test set, with multiple myeloma, acute lymphocytic leukemia, and lymphoma revealed as the three diseases diagnosed with the highest accuracy values of 98%, 96%, and 96%, respectively. Regarding patient-level prediction, the average accuracy of MobileViTv2 was 96.72%. This model outperformed both CNN and ViT models in terms of accuracy, despite utilizing only 9.8 million parameters. When applied to two public datasets, MobileViTv2 exhibited accuracy values of 99.75% and 99.72%, respectively, and outperformed previous methods. CONCLUSIONS: The proposed framework could be applied directly to bone marrow microscopic images with different stain styles to efficiently establish the diagnosis of common hematologic malignancies.


Asunto(s)
Neoplasias Hematológicas , Leucemia-Linfoma Linfoblástico de Células Precursoras , Humanos , Médula Ósea/diagnóstico por imagen , Médula Ósea/patología , Neoplasias Hematológicas/diagnóstico por imagen
2.
Arch Virol ; 155(10): 1681-5, 2010 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-20680362

RESUMEN

Tobacco mosaic virus (TMV) can cause a severe disease that is capable of greatly reducing tobacco quality and yield. In this study, a one-step reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay was developed for detection of TMV. The concentration of Mg(2+), reaction temperature and reaction time of the RT-LAMP were optimized to 5 mM, 65°C, and 60 min, respectively. The detection limit of the method was 100 times higher than that of RT-PCR. Visual inspection of RT-LAMP amplification demonstrated that positive and negative reactions exhibit distinctly different colours in daylight. Our results demonstrate that the method is stable, sensitive and specific.


Asunto(s)
Técnicas de Amplificación de Ácido Nucleico/métodos , Transcripción Reversa , Virus del Mosaico del Tabaco/aislamiento & purificación , Virología/métodos , Cationes Bivalentes/metabolismo , Coenzimas/metabolismo , Color , Magnesio/metabolismo , Enfermedades de las Plantas/virología , Temperatura , Factores de Tiempo , Nicotiana/virología
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