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1.
Acta Chir Orthop Traumatol Cech ; 75(5): 375-81, 2008 Oct.
Artículo en Sk | MEDLINE | ID: mdl-19026192

RESUMEN

PURPOSE OF THE STUDY Analysis of the tissue harvested around the total hip replacement isolated from re-operated patients in order to: (1) characterize complexity of structural processes developing in the region of the total hip replacement and, (2) to define the role and significance of histological structures of this tissue, mainly in relation to implant loosening, from the viewpoint of formal and causal pathogenesis. MATERIAL AND METHODS Biopsied material isolated from periarticular tissue of re-operated patients (n=19) after THR was analyzed using the methods of light optic, fluorescent (TUNEL), and transmission electron microscopy. RESULTS Histological analysis revealed fibroproliferaive processes and epithelioid granulomatosis cell reaction around the implant with the formation of giant multinuclear syncythial (osteoclastlike) structures as a response to foreign bodies. These structures phagocyte fragments of foreign material (polyethylene particles from the implant, cement fragments). All the used methods revealed a range of regressive changes in the layers of foreign microparticles (inside giant multinuclear cells) typical of fibrinoid necrosis in collagen fibres and apoptosis. In certain cases, progressive changes as chondroid and synovial differentiation (metaplasia) were observed. DISCUSSION Total hip replacement, despite all positive aspects for patients, may cause permanent inflammatory processes in its surrounding. This may result in an extensive fibroproduction of a differently thick layer of connective tissue around the implant. An important factor of loosening of THR is probably osteoclastic resorption in the area of "bone-implant" interface, as a result of the interaction between the inflammatory mechanisms around the implant. CONCLUSION In the postoperative period, there occur fibroproliferative changes in the periarticular tissue and large population of multinuclear cells. In our view, these cells play a role in the production of wear particles from the implant and microparticles of bone tissues and bone cement. Fibroproliferative process may be considered as an immune response to the implanted foreign material.


Asunto(s)
Artroplastia de Reemplazo de Cadera , Tejido de Granulación/patología , Articulación de la Cadera/patología , Prótesis de Cadera , Falla de Prótesis , Anciano , Anciano de 80 o más Años , Femenino , Reacción a Cuerpo Extraño/patología , Tejido de Granulación/diagnóstico por imagen , Humanos , Etiquetado Corte-Fin in Situ , Masculino , Microscopía Electrónica de Transmisión de Rastreo , Persona de Mediana Edad , Reoperación , Ultrasonografía
2.
Biochim Biophys Acta ; 418(1): 73-80, 1976 Jan 05.
Artículo en Inglés | MEDLINE | ID: mdl-173396

RESUMEN

Two homologous systems for cell-free protein synthesis from chick embryo connective tissues are described. Both the skin polysomes and the wing-leg polysomes are active in collagen synthesis, but they have different requirements for optimum protein synthesis. Protein synthesis was not dependent on tissue-specific factors, since heterologous preparations of supernatant enzymes or initiation factors were able to stimulate maximum protein synthesis with each fraction of polysomes.


Asunto(s)
Tejido Conectivo/metabolismo , Biosíntesis de Proteínas , Animales , Sistema Libre de Células , Embrión de Pollo , Tejido Conectivo/efectos de los fármacos , Magnesio/farmacología , Colagenasa Microbiana/farmacología , Músculos/metabolismo , Polirribosomas/efectos de los fármacos , Polirribosomas/metabolismo , Potasio/farmacología , Biosíntesis de Proteínas/efectos de los fármacos , Piel/metabolismo
3.
Free Radic Biol Med ; 11(4): 425-32, 1991.
Artículo en Inglés | MEDLINE | ID: mdl-1665839

RESUMEN

Exposure of phagocytic cells to asbestos in vitro results in an augmented production of reactive oxygen metabolites and increased peroxidation of lipids. The aim of this investigation was to assess the extent of lipid peroxidation both in cells and fluid obtained from bronchoalveolar lavage (BAL), and in lungs of rats exposed to crocidolite asbestos or titanium dioxide (TiO2), a nonfibrous particulate control. In comparison to sham and TiO2-exposed rats, the BAL fluid and cells of crocidolite-exposed animals contained significantly elevated levels of malondialdehyde (MDA), a breakdown product of lipid peroxidation detected using high-pressure liquid chromatography (HPLC). In contrast, no significant differences in MDA were detected in lavaged lung tissue from these animals. Inhalation of crocidolite caused an early inflammatory response characterized by elevated numbers of polymorphonuclear leukocytes and lymphocytes, as well as enhanced total protein in BAL. Pulmonary fibrosis and increased lung hydroxyproline also were observed after 20 days of exposure. Exposure to TiO2 did not cause inflammation, pulmonary fibrosis, or elevated amounts of hydroxyproline in the lung. Our results show that exposure to the fibrogenic and inflammatory mineral, crocidolite, results in an enhanced lipid peroxidation in BAL cells and fluid not observed after inhalation of the particulate TiO2. These novel observations suggest that MDA in BAL may be useful as a biomarker of exposure to inhaled asbestos or other oxidants.


Asunto(s)
Amianto/farmacología , Líquido del Lavado Bronquioalveolar/metabolismo , Peroxidación de Lípido/efectos de los fármacos , Pulmón/fisiología , Administración por Inhalación , Animales , Amianto/administración & dosificación , Asbesto Crocidolita , Colágeno/análisis , Hidroxiprolina/análisis , Pulmón/citología , Pulmón/efectos de los fármacos , Masculino , Malondialdehído/análisis , Ratas , Ratas Endogámicas F344 , Titanio/farmacología
4.
Free Radic Biol Med ; 9(1): 51-8, 1990.
Artículo en Inglés | MEDLINE | ID: mdl-2210441

RESUMEN

Inhalation of toxic materials such as asbestos, silica, 100% oxygen, ozone, or nitrogen dioxide may lead to an increased production of reactive oxygen metabolites which may initiate lipid peroxidation. Measurement of lipid peroxidation in cells and fluid obtained by bronchoalveolar lavage (BAL), as well as in lung tissue, may aid in monitoring the development and extent of pulmonary damage after inhalation of a toxic substance. In this study, we employed a sensitive assay for detection of malondialdehyde (MDA), a breakdown product of lipid peroxidation. By separation of the adduct with thiobarbituric acid, using a reverse phase high pressure liquid chromatographic technique, we accurately and sensitively measured the content of MDA in BAL cells, lavage fluid, and lavaged lung tissue homogenates of rats. The amounts of sample required for detection of MDA were small enough possibly to be applied to use with human specimens; in addition, recovery of added MDA was acceptable with all types of samples. Inclusion of a metal chelator in the preparation of samples appeared necessary to prevent metal-catalyzed propagation of lipid peroxidation during the assay. Overall, the method described here using samples from rats may be applicable to detecting lipid peroxidation in BAL samples from humans.


Asunto(s)
Líquido del Lavado Bronquioalveolar/metabolismo , Pulmón/metabolismo , Malondialdehído/metabolismo , Animales , Cromatografía Líquida de Alta Presión , Radicales Libres , Peroxidación de Lípido , Pulmón/efectos de los fármacos , Masculino , Cloruro de Potasio/farmacología , Ratas , Ratas Endogámicas F344
5.
J Immunol Methods ; 13(2): 167-73, 1976.
Artículo en Inglés | MEDLINE | ID: mdl-789776

RESUMEN

A passive hemagglutination procedure for detection of antibody to group A beta-hemolytic streptococcus polysaccharide is described. The polysaccharide was conjugated to human gamma globulin and the complex adsorbed onto stabilized human erythrocytes. Antigen coated cells were used to measure antibody levels in normal human sera and in rabbit antisera.


Asunto(s)
Polisacáridos Bacterianos/inmunología , Streptococcus pyogenes/inmunología , Animales , Anticuerpos/análisis , Vacunas Bacterianas/farmacología , Pruebas de Inhibición de Hemaglutinación , Pruebas de Hemaglutinación/métodos , Humanos , Sueros Inmunes/farmacología , Masculino , Conejos
6.
Neuroscience ; 115(1): 15-30, 2002.
Artículo en Inglés | MEDLINE | ID: mdl-12401318

RESUMEN

Whole cell patch recordings were obtained from medium diameter (35-45 microm) dorsal root ganglion neurons. Using electrophysiological parameters, we were able to subclassify acutely dissociated dorsal root ganglion cells into three uniform (types 5, 6 and 9) and one mixed class (type 8) of neurons. All subtypes (types 5, 6, 8 and 9) had broad action potentials (7.0+/-0.2, 5.2+/-0.4, 7.3+/-0.5 and 6.0+/-0.4 ms) and exceptionally long afterhyperpolarizations (112+/-9, 178+/-19, 124+/-31 and 204+/-33 ms). Long afterhyperpolarizations have been linked to mechanically insensitive (silent) nociceptors by other laboratories [Djouhri et al., J. Physiol. 513 (1998) 857-872]. Chemosensitivity varied among cell classes. Cell types 5, 8 and 9 were capsaicin sensitive (45+/-13, 87+/-30 and 28+/-13 pA/pF; 5 microM) groups, while the type 6 cell was capsaicin insensitive. All cell types expressed ASIC-like (acid sensing ion channel) amiloride sensitive, proton-activated currents with a threshold of pH 6.8 and a peak near pH 5.0. All medium sized cells were sensitive to ATP (50 microM) and exhibited the 'mixed' form of ATP-gated current [Burgard et al., J. Neurophysiol. 82 (1999) 1590-1598; Grubb and Evans, Eur. J. Neurosci. 11 (1999) 149-154]. Immunohistochemistry performed on individual cells indicated the expression of both P2X(1) and P2X(3) subunits. Electrophysiologically defined classes were histochemically uniform. All types were examined for the presence of substance P (SP), calcitonin gene related peptide (CGRP) and binding of isolectin B4 (IB4). All subtypes expressed CGRP immunoreactivity. Types 5 and 8 co-expressed SP and CGRP immunoreactivity and also bound IB4. Subtypes 6 and 9 were positive for neurofilament m. It is likely that these cells represent major classes of myelinated and unmyelinated peptide expressing nociceptors.


Asunto(s)
Ganglios Espinales/química , Ganglios Espinales/fisiología , Neuronas/química , Neuronas/clasificación , Animales , Tamaño de la Célula/fisiología , Electrofisiología , Ganglios Espinales/citología , Inmunohistoquímica , Masculino , Neuronas/fisiología , Técnicas de Placa-Clamp/métodos , Fenotipo , Ratas , Ratas Sprague-Dawley
7.
J Chem Neuroanat ; 20(2): 141-62, 2000 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-11118807

RESUMEN

We determined the co-expression of immunoreactivity (IR) for ATP-receptor subunits (P2X1, P2X2, and P2X3), neuropeptides, neurofilament (NF), and binding of the isolectin B(4) from Griffonia simplicifolia type one (GS-I-B(4)) in adult dorsal root ganglion neurons. P2X1-IR was expressed primarily in small DRG neurons. Most P2X1-IR neurons expressed neuropeptides and/or GS-I-B(4)-binding, but lacked NF-IR. P2X1-IR overlapped with P2X3-IR, though each was also found alone. P2X2-IR was expressed in many P2X3-IR small neurons, as well as a group of medium to large neurons that lacked either P2X3-IR or GS-I-B(4)-binding. A novel visible four-channel fluorescence technique revealed a unique population of P2X2/3-IR neurons that lacked GS-I-B(4)-binding but expressed NF-IR. Co-expression of P2X1, and P2X3 in individual neurons was also demonstrated. We examined P2X subunit-IR on individual recorded neurons that had been classified by current signature in vitro. Types 1, 2, 4 5, and 7 expressed distinct patterns of P2X-IR that corresponded to patterns identified in DRG sections, and had distinct responses to ATP. Types with rapid ATP currents (types 2, 5, and 7) displayed P2X3-IR and/or P2X1-IR. Types with slow ATP currents (types 1 and 4) displayed P2X2/3-IR. Type 1 neurons also displayed P2X1-IR. This study demonstrates that the correlation between physiological responses to ATP and the expression of particular P2X receptor subunits derived from expression systems is also present in native neurons, and also suggests that novel functional subunit combinations likely exist.


Asunto(s)
Neuronas Aferentes/química , Lectinas de Plantas , Receptores Purinérgicos P2/análisis , Adenosina Trifosfato/farmacología , Animales , Anticuerpos , Capsaicina , Femenino , Ganglios Espinales/química , Ganglios Espinales/citología , Inmunohistoquímica , Lectinas , Masculino , Nociceptores/química , Nociceptores/efectos de los fármacos , Ratas , Ratas Sprague-Dawley , Receptores Purinérgicos P2/inmunología , Receptores Purinérgicos P2X , Receptores Purinérgicos P2X2 , Receptores Purinérgicos P2X3
8.
Neuroreport ; 12(13): 2995-7, 2001 Sep 17.
Artículo en Inglés | MEDLINE | ID: mdl-11588618

RESUMEN

Triple fluorescent histochemistry was used to describe the types of overlap in visceral sensory neurons (nodose ganglion) for the labeling of the isolectin B4 from Griffonia simplicifolia type one (GS-I-B4) and their immunoreactivity (IR) for two of the ATP receptor subunits (P2X1/3 or P2X2/3). The vast majority of nodose neurons expressed GS-I-B4-binding and most of these displayed P2X receptor IR. Most of the P2X-IR was co-expressed on these individual nodose neurons (P2X1/P2X3 or P2X2/P2X3). A very small subpopulation of neurons that were GS-I-B4 negative but P2X positive displayed a very high relative intensity of P2X3-IR. The functional role that these expression patterns play in visceral sensory processing is currently unclear.


Asunto(s)
Lectinas/farmacocinética , Neuronas Aferentes/metabolismo , Nociceptores/metabolismo , Ganglio Nudoso/metabolismo , Dolor/metabolismo , Receptores Purinérgicos P2/metabolismo , Aferentes Viscerales/metabolismo , Animales , Sitios de Unión/efectos de los fármacos , Sitios de Unión/fisiología , Femenino , Inmunohistoquímica , Neuronas Aferentes/citología , Nociceptores/citología , Ganglio Nudoso/citología , Dolor/fisiopatología , Ratas , Receptores Purinérgicos P2X , Receptores Purinérgicos P2X2 , Receptores Purinérgicos P2X3 , Aferentes Viscerales/citología
9.
Neuroreport ; 11(16): 3589-92, 2000 Nov 09.
Artículo en Inglés | MEDLINE | ID: mdl-11095524

RESUMEN

Triple fluorescent staining for P2X1 and P2X3 subunits and isolectin I-B4 (IB4) were performed on acutely dissociated rat DRG neurons. Immunoreactivity for P2X1 and P2X3 subunits was present separately or together in DRG neurons. P2X1 immunoreactivity was present in both IB4-positive and IB4-negative cells. When combining patch-clamp recordings with immunostaining for the P2X1 and P2X3 subunits on single recorded cells, ATP-evoked fast currents were shown to be present on DRG neurons that have immunoreactivity for the P2X3 subunit only, the P2X1 subunit only, or both P2X1 and P2X3 subunits. These results raised a possibility that, in addition to the P2X3 receptor subunit, the P2X1 subunit may also contribute to functional P2X receptors with fast kinetics in DRG neurons.


Asunto(s)
Adenosina Trifosfato/farmacología , Potenciales Evocados/fisiología , Ganglios Espinales/fisiología , Neuronas/fisiología , Receptores Purinérgicos P2/fisiología , Animales , Potenciales Evocados/efectos de los fármacos , Ganglios Espinales/citología , Inmunohistoquímica , Cinética , Neuronas/efectos de los fármacos , Técnicas de Placa-Clamp , Ratas , Receptores Purinérgicos P2/análisis , Receptores Purinérgicos P2X , Receptores Purinérgicos P2X3
10.
Contemp Top Lab Anim Sci ; 40(5): 37-43, 2001 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-11560404

RESUMEN

Survival of ad libitum-fed rats has declined in the 2-year carcinogenicity bioassay. Restriction of the number of calories, without compromise of the overall nutrition offered to animals including rats, results in increased lifespan of animals. Diet restriction in rats is best achieved through offering of rations of feed daily instead of weekly, as is routinely done in ad libitum studies. The objective of this project was to develop an accurate and precise method of dispensing daily rations of feed. A gravimetric vibratory-type dispenser was used to dispense target weights of 15 and 20 g of powdered certified rodent diet into either labeled pouches or seven-well carousel feeders. The tolerance of the dispenser was the target weight +/- 3%. The amount of food offered to the diet-restricted rats was approximately 25% lower than that consumed by rats offered diet ad libitum. After 2 years, male rats offered 20 g and female rats offered 15 g of powdered rodent diet daily had remarkably lower body weights than did animals offered the diet ad libitum. Generally, the rats ate the entire ration of food offered to them each day. Survival of the diet-restricted rats was 70% to 82% at the end of a 2-year study. This investigation demonstrates that modest reduction of food intake, resulting in increased survival of Sprague Dawley rats in 2-year carcinogenicity bioassays, can be achieved reliably and efficiently through use of an accurate and precise automated method of dispensing powdered diet for use in multiple rat studies. In addition, this method of food dispensing provides a practical way to administer test compound in the diet under the conditions of diet restriction.


Asunto(s)
Alimentación Animal , Crianza de Animales Domésticos/instrumentación , Animales de Laboratorio , Carcinógenos/toxicidad , Privación de Alimentos , Animales , Ritmo Circadiano , Ingestión de Alimentos , Femenino , Masculino , Ratas , Ratas Sprague-Dawley , Caracteres Sexuales , Aumento de Peso , Pérdida de Peso
13.
Nucleic Acids Res ; 11(8): 2495-510, 1983 Apr 25.
Artículo en Inglés | MEDLINE | ID: mdl-6304654

RESUMEN

Substitution of BrdU for dT in mammalian DNA alters the rates of DNA cleavage by restriction endonucleases in a manner that can be related to the specificity of cleavage. A formula is proposed that describes inhibitory and stimulatory contributions arising from the substitution of a Br atom for the CH3 group on T. The larger Br atom is postulated to sterically hinder the nuclease from binding to adjacent groups in the DNA cleavage site, while allowing a tighter binding to itself. The inhibition caused by steric hindrance is predicted to vary inversely with distance from the point of cleavage, whereas the stimulation caused by tighter binding is predicted to be independent of distance. The resultant formula gives a good fit to the data obtained for thirteen different restriction nucleases of known specificity. The parameters in the formula appear to be simple functions of ionic strength. This formula can be used to predict the effect of BrdU substitution on any endonuclease whose specificity of cleavage is known.


Asunto(s)
Secuencia de Bases , Bromodesoxiuridina/metabolismo , Enzimas de Restricción del ADN/metabolismo , ADN , Animales , Línea Celular , Cricetinae , Cinética , Melanoma , Mesocricetus , Neoplasias Experimentales , Unión Proteica , Especificidad por Sustrato
14.
J Biol Chem ; 260(12): 7533-9, 1985 Jun 25.
Artículo en Inglés | MEDLINE | ID: mdl-3158658

RESUMEN

We propose a model to describe the frequencies of site-specific base substitution errors by DNA polymerase. In the model, nucleotide misinsertion frequencies are determined by 5'-nearest-neighbor base stacking and 3'-exonucleolytic proofreading efficiencies are governed by the relative proportions of G . C base pairs in the region surrounding the misinserted nucleotide. The model is used to analyze the frequency of replacing dAMP by 2-aminopurine deoxyribonucleotide with purified bacteriophage T4 L141 antimutator DNA polymerase at 57 sites on phi X174 DNA (Pless, R. C., and Bessman, M.J. (1983) Biochemistry 22, 4905-4915). A linear least-squares fit yields a correlation coefficient of 0.83 and a standard deviation of 2.8% between predicted and observed results. Four to five base pairs on each side of the 2-aminopurine incorporation site, approximately one double-helical turn, are found to exert a maximal influence on proofreading. Thermal melting data on native and synthetic DNA are used to deduce base-stacking energies for nearest-neighbor doublets including those involving 2-aminopurine. The inclusion of base-stacking energies in the model calculations leads to predictions similar to those based on the use of empirical parameters for individual base pairs.


Asunto(s)
Secuencia de Bases , ADN Polimerasa Dirigida por ADN/metabolismo , Bacteriófago phi X 174 , Composición de Base , ADN Viral , Matemática , Modelos Genéticos , Especificidad por Sustrato , Fagos T
15.
J Biol Chem ; 270(2): 746-50, 1995 Jan 13.
Artículo en Inglés | MEDLINE | ID: mdl-7822305

RESUMEN

We investigate enthalpy-entropy compensation for melting of nearest-neighbor doublets in DNA. Based on data for 10 normal doublets and for doublets containing a mispaired or analog base, the correlation of delta Szero with delta Hzero follows a rectangular hyperbola. Doublet melting temperature relates linearly to delta Hzero by Tm = T(o) + delta Hzero/a, where T(o) = 273 K and a = 80 cal/mol-K. Thus Tm is proportional to delta Hzero + aTo rather than to delta Hzero alone as previously thought by assuming delta Szero to be constant. The term aTo = 21.8 kcal/mol may reflect a constant enthalpy change in solvent accompanying the DNA enthalpy change for doublet melting and is roughly equivalent to breaking four H-bonds between water molecules for each melted doublet. The solvent entropy change (aTo/Tm) declines with increasing Tm, while the DNA entropy change (delta Hzero/Tm) rises, so the combined DNA + solvent entropy change stays constant at 80 cal/K/mol of doublet. If such constancy in DNA + solvent entropy changes also holds for enzyme clefts as "solvent," then free energy differences for competing correct and incorrect base pairs in polymerase clefts may be as large as enthalpy differences and possibly sufficient to account for DNA polymerase accuracy. The hyperbolic relationship between delta Szero and delta Hzero observed in 1 M salt can be used to evaluate delta Hzero and delta Szero from Tm at lower, physiologically relevant, salt concentrations.


Asunto(s)
ADN/química , Secuencia de Bases , Datos de Secuencia Molecular , Desnaturalización de Ácido Nucleico , Sales (Química) , Termodinámica , Agua
16.
Proc Natl Acad Sci U S A ; 83(6): 1559-62, 1986 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-3456600

RESUMEN

We propose a model for DNA polymerase fidelity in which free energy differences, delta delta G, between matched and mismatched nucleotides are magnified at the enzyme's active site. Both hydrogen bonding and stacking components of the interaction energy are amplified, with the most profound effect being on the magnitude of hydrogen-bonding interactions. Magnification in delta delta G values follows from the exclusion of water around base pairs in the active site cleft of the enzyme. After showing that base-pair dissociation energies calculated from hydrogen-bonding and base-stacking interactions in vacuo are greatly reduced by water, it is proposed that water removal results in a proportional restoration of these contributions to base pairing. Assuming approximately equal to 40% exclusion of surrounding water, one predicts magnified values of delta delta G sufficient to account for polymerase insertion and proofreading fidelity, thereby avoiding the need to postulate additional active site constraints in order to select or reject nucleotides.


Asunto(s)
ADN Polimerasa Dirigida por ADN/metabolismo , ADN/metabolismo , Modelos Genéticos , Composición de Base , Sitios de Unión , Fenómenos Químicos , Química Física , Conformación de Ácido Nucleico , Proteínas , Soluciones , Termodinámica , Vacio , Agua
17.
J Biol Chem ; 265(4): 2338-46, 1990 Feb 05.
Artículo en Inglés | MEDLINE | ID: mdl-1688852

RESUMEN

A polyacrylamide gel assay is used to measure the kinetics of adding a single deoxyribonucleotide onto either a correctly matched or mismatched primer 3' terminus (on M13 template) for all possible DNA base pairs and mispairs using Drosophila melanogaster DNA polymerase alpha (Pol alpha) and avian myeloblastosis virus reverse transcriptase. The reverse transcriptase catalyzes chain extension from transition mispairs (Pur.Pyr and Pyr.Pur, where Pur is purine and Pyr is pyrimidine) more efficiently than polymerase alpha. Reverse transcriptase extends G(primer).T almost 20% as efficiently as it extends A.T, while Pol alpha's G.T extension efficiency is less than 1%. For transversion mispairs (Pur.Pur and Pyr.Pyr), reverse transcriptase extends C.T and T.T with greater efficiency than polymerase alpha, while polymerase alpha is more efficient at extending A.G and G.G mispairs. Reverse transcriptase and polymerase alpha extend the G.G mispair at an efficiency of only 10(-6) and 10(-5), respectively, compared with G.C extension. The extension data for the two polymerases are compared with previously reported nucleotide misinsertion data for the same enzymes (Mendelman, L. V., Boosalis, M. S., Petruska, J., and Goodman, M. F. (1989) J. Biol. Chem. 264, 14415-14423). While the results obtained with reverse transcriptase and Pol alpha differ in detail, some general rules are indicated: (a) Pur.Pyr and Pyr.Pur mispairs, especially G.T and T.G, are easy to insert and even easier to extend; (b) Pyr.Pyr mispairs, especially C.C, are difficult to insert and slightly easier to extend; (c) Pur.Pur mispairs, notably G.G, are harder to extend than to insert. The comparison also shows that reverse transcriptase extends almost all mismatches more efficiently than it forms them, G.G being the only mismatch having a significantly lower efficiency of extension than insertion. Polymerase alpha inserts A.A mismatches most efficiently, but extends them inefficiently, thereby reducing the probability that such transversion mutations will occur in vivo. We show theoretically that when mispaired primers compete with properly matched primers for extension by polymerase, the relative velocities of extension depend on the concentration of the next correct dNTP substrate. The extension velocities depart from Michaelis-Menten kinetics by exhibiting positive cooperativity with respect to substrate concentration.


Asunto(s)
ADN Polimerasa II/metabolismo , ADN Polimerasa Dirigida por ARN/metabolismo , Animales , Virus de la Mieloblastosis Aviar/enzimología , Composición de Base , Secuencia de Bases , Drosophila melanogaster/enzimología , Cinética , Matemática , Modelos Teóricos , Datos de Secuencia Molecular , Oligodesoxirribonucleótidos/síntesis química , Moldes Genéticos
18.
J Biol Chem ; 262(30): 14689-96, 1987 Oct 25.
Artículo en Inglés | MEDLINE | ID: mdl-3667598

RESUMEN

A quantitative assay based on gel electrophoresis is described to measure nucleotide insertion kinetics at an arbitrary DNA template site. The assay is used to investigate kinetic mechanisms governing the fidelity of DNA synthesis using highly purified Drosophila DNA polymerase alpha holoenzyme complex and M13 primer-template DNA. Km and Vmax values are reported for correct insertion of A and misinsertion of G, C, and T opposite a single template T site. The misinsertion frequencies are 2 X 10(-4) for G-T and 5 X 10(-5) for both C-T and T-T relative to normal A-T base pairs. The dissociation constant of the polymerase-DNA-dNTP complex, as measured by Km, plays a dominant role in determining the rates of forming right and wrong base pairs. Compared with Km for insertion of A opposite T (3.7 +/- 0.7 microM), the Km value is 1100-fold greater for misinsertion of G opposite T (4.2 +/- 0.4 mM), and 2600-fold greater for misinsertion of either C or T opposite T (9.8 +/- 4.2 mM). These Km differences indicate that in the enzyme binding site the stability of A-T base pairs is 4.3 kcal/mol greater than G-T pairs and 4.9 kcal/mol greater than C-T or T-T pairs. In contrast to the large differences in Km, differences in Vmax are relatively small. There is only a 4-fold reduction in Vmax for insertion of G opposite T and an 8-fold reduction for C or T opposite T, compared with the correct insertion of A. For the specific template T site investigated, the nucleotide insertion fidelity for Drosophila polymerase alpha seems to be governed primarily by a Km discrimination mechanism.


Asunto(s)
ADN Polimerasa Dirigida por ADN/farmacología , ADN/biosíntesis , Mutación , Composición de Base , Unión Competitiva , Electroforesis en Gel de Poliacrilamida , Cinética , Nucleótidos/metabolismo
19.
Somatosens Mot Res ; 14(1): 17-26, 1997.
Artículo en Inglés | MEDLINE | ID: mdl-9241725

RESUMEN

The alpha-D-galactose specific isolectin I-B4 from Griffonia simplicifolia (GS-I-B4) labels CNS microglia and certain peripheral neurons, including a subpopulation of small dark, type B dorsal root ganglion cells, some post-ganglionic sympathetic axons, and nearly all peripheral gustatory axons. The innervation patterns of GS-I-B4 reactive sensory ganglion cells are unknown for many peripheral target tissues, including their probable primary target, the skin. The present study describes the distribution of GS-I-B4 reactive axons in hairy and glabrous hindpaw skin and in the glans penis of rats, using both single and double-labelling histochemical techniques. Neuronal processes were identified using (1) histochemistry with horseradish peroxidase conjugated GS-I-B4 or (2) immunohistochemistry against PGP 9.5 to identify all axons, and biotinylated lectin histochemistry with avidin-FITC to identify the subpopulation of GS-I-B4 reactive axons. GS-I-B4 strongly labelled unmyelinated cutaneous sensory afferents, as well as some sympathetic efferents and visceral afferents. lectin reactive axons were seen to innervate the upper hair shaft epidermis in hairy skin, and were abundant in the shallow dermis in hairy and glabrous skin and glans penis. Lectin reactive axons were also abundant in the lamina propria and distal urethral epithelium of the penis. These results provide new evidence for the cutaneous sensory role of GS-I-B4 reactive primary afferents, as well as evidence to support the contention that the lectin is a specific marker for a subpopulation of unmyelinated axons and not simply a marker for the myelination state of an axon.


Asunto(s)
Axones/ultraestructura , Técnicas para Inmunoenzimas , Lectinas , Mecanorreceptores/anatomía & histología , Fibras Nerviosas/ultraestructura , Pene/inervación , Piel/inervación , Animales , Femenino , Masculino , Neuronas Aferentes/ultraestructura , Nervios Periféricos/anatomía & histología , Ratas , Ratas Sprague-Dawley
20.
J Biol Chem ; 273(9): 5204-10, 1998 Feb 27.
Artículo en Inglés | MEDLINE | ID: mdl-9478975

RESUMEN

Lengthy expansions of trinucleotide repeats are found in DNA of patients suffering severe neurodegenerative age-related diseases. Using a synthetic self-priming DNA, containing CAG and CTG repeats implicated in Huntington's disease and several other neurological disorders, we measure the equilibrium distribution of hairpin folding and generate triplet repeat expansions by polymerase-catalyzed extensions of the hairpin folds. Expansions occur by slippage in steps of two CAG triplets when the self-priming sequence (CTG)16(CAG)4 is extended with proofreading-defective Klenow fragment (KF exo-) from Escherichia coli DNA polymerase I. Slippage by two triplets is 20 times more frequent than by one triplet, in accordance with our finding that hairpin loops with even numbers of triplets are 1-2 kcal/mol more stable than their odd-numbered counterparts. By measuring triplet repeat expansions as they evolve over time, individual rate constants for expansion from 4 to 18 CAG repeats are obtained. An empirical expression is derived from the data, enabling the prediction of slippage rates from the ratio of hairpin CTG/CTG interactions to CAG/CTG interactions. Slippage is initiated internally in the hairpin folds in preference to melting inward from the 3' terminus. The same triplet expansions are obtained using proofreading-proficient KF exo+, provided 10-100-fold higher dNTP concentrations are present to counteract the effect of 3'-exonucleolytic proofreading.


Asunto(s)
ADN Polimerasa I/metabolismo , Enfermedades Neurodegenerativas/genética , Repeticiones de Trinucleótidos , Secuencia de Bases , ADN de Cadena Simple/metabolismo , Exonucleasas/metabolismo , Ataxia de Friedreich/genética , Humanos , Enfermedad de Huntington/genética , Modelos Genéticos , Datos de Secuencia Molecular , Conformación de Ácido Nucleico , Desnaturalización de Ácido Nucleico
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