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1.
Sensors (Basel) ; 23(16)2023 Aug 18.
Artículo en Inglés | MEDLINE | ID: mdl-37631799

RESUMEN

Deep Transfer Learning (DTL) signifies a novel paradigm in machine learning, merging the superiorities of deep learning in feature representation with the merits of transfer learning in knowledge transference. This synergistic integration propels DTL to the forefront of research and development within the Intelligent Fault Diagnosis (IFD) sphere. While the early DTL paradigms, reliant on fine-tuning, demonstrated effectiveness, they encountered considerable obstacles in complex domains. In response to these challenges, Adversarial Deep Transfer Learning (ADTL) emerged. This review first categorizes ADTL into non-generative and generative models. The former expands upon traditional DTL, focusing on the efficient transference of features and mapping relationships, while the latter employs technologies such as Generative Adversarial Networks (GANs) to facilitate feature transformation. A thorough examination of the recent advancements of ADTL in the IFD field follows. The review concludes by summarizing the current challenges and future directions for DTL in fault diagnosis, including issues such as data imbalance, negative transfer, and adversarial training stability. Through this cohesive analysis, this review aims to offer valuable insights and guidance for the optimization and implementation of ADTL in real-world industrial scenarios.

2.
Sensors (Basel) ; 23(14)2023 Jul 20.
Artículo en Inglés | MEDLINE | ID: mdl-37514845

RESUMEN

Ship fires are one of the main factors that endanger the safety of ships; because the ship is far away from land, the fire can be difficult to extinguish and could often cause huge losses. The engine room has many pieces of equipment and is the principal place of fire; however, due to its complex internal environment, it can bring many difficulties to the task of fire detection. The traditional detection methods have their own limitations, but fire detection using deep learning technology has the characteristics of high detection speed and accuracy. In this paper, we improve the YOLOv7-tiny model to enhance its detection performance. Firstly, partial convolution (PConv) and coordinate attention (CA) mechanisms are introduced into the model to improve its detection speed and feature extraction ability. Then, SIoU is used as a loss function to accelerate the model's convergence and improve accuracy. Finally, the experimental results on the dataset of the ship engine room fire made by us shows that the mAP@0.5 of the improved model is increased by 2.6%, and the speed is increased by 10 fps, which can meet the needs of engine room fire detection.

3.
Sensors (Basel) ; 22(19)2022 Sep 25.
Artículo en Inglés | MEDLINE | ID: mdl-36236360

RESUMEN

In the engine room of intelligent ships, visual recognition is an essential technical precondition for automatic inspection. At present, the problems of visual recognition in marine engine rooms include missing detection, low accuracy, slow speed, and imperfect datasets. For these problems, this paper proposes a marine engine room equipment recognition model based on the improved You Only Look Once v5 (YOLOv5) algorithm. The channel pruning method based on batch normalization (BN) layer weight value is used to improve the recognition speed. The complete intersection over union (CIoU) loss function and hard-swish activation function are used to enhance detection accuracy. Meanwhile, soft-NMS is used as the non-maximum suppression (NMS) method to reduce the false rate and missed detection rate. Then, the main equipment in the marine engine room (MEMER) dataset is built. Finally, comparative experiments and ablation experiments are carried out on the MEMER dataset to verify the strategy's efficacy on the model performance boost. Specifically, this model can accurately detect 100.00% of diesel engines, 95.91% of pumps, 94.29% of coolers, 98.54% of oil separators, 64.21% of meters, 60.23% of reservoirs, and 75.32% of valves in the actual marine engine room.


Asunto(s)
Navíos
6.
Biol Pharm Bull ; 40(7): 1021-1028, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-28674245

RESUMEN

A rapid, effective extraction technique has been established for measuring the gallic acid in rat plasma by using sandwich-structured graphene/mesoporous silica composites with C8-modified interior pore-walls as adsorbent. The unique characteristics of the graphene-silica composites excluded large molecules, like proteins, from the mesopore channels as a result of size exclusion effect, leading to a direct extraction of drug molecules from protein-rich biological samples such as plasma without any other pretreatment procedure. Followed by elution and centrifugation, the gallic acid-absorbed composites were rapidly isolated before LC-MS/MS. Serving as a reliable tool for analysis of Traditional Chinese Medicine: Changtai Granule, the newly developed method was fully validated and successfully applied in the pharmacokinetic study of gallic acid in rat plasma. Extraction recovery, matrix effect and stability were satisfactory in rat plasma. According to the results of pharmacokinetic studies, Changtai Granule exhibited greater adsorption, distribution and clearance properties of gallic acid in the treatment of ulcerative colitis. Hence, this study may offer a valuable alternative to simplify and speed up sample preparation, and be useful for clinical studies of related preparations.


Asunto(s)
Medicamentos Herbarios Chinos/administración & dosificación , Ácido Gálico/sangre , Grafito/química , Dióxido de Silicio/química , Administración Oral , Animales , Ácido Gálico/farmacocinética , Límite de Detección , Masculino , Ratas , Ratas Sprague-Dawley , Reproducibilidad de los Resultados
7.
ScientificWorldJournal ; 2014: 148686, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-25110725

RESUMEN

Though label propagation algorithm (LPA) is one of the fastest algorithms for community detection in complex networks, the problem of trivial solutions frequently occurring in the algorithm affects its performance. We propose a label propagation algorithm with prediction of percolation transition (LPAp). After analyzing the reason for multiple solutions of LPA, by transforming the process of community detection into network construction process, a trivial solution in label propagation is considered as a giant component in the percolation transition. We add a prediction process of percolation transition in label propagation to delay the occurrence of trivial solutions, which makes small communities easier to be found. We also give an incomplete update condition which considers both neighbor purity and the contribution of small degree vertices to community detection to reduce the computation time of LPAp. Numerical tests are conducted. Experimental results on synthetic networks and real-world networks show that the LPAp is more accurate, more sensitive to small community, and has the ability to identify a single community structure. Moreover, LPAp with the incomplete update process can use less computation time than LPA, nearly without modularity loss.


Asunto(s)
Algoritmos , Redes Neurales de la Computación
8.
Nanomaterials (Basel) ; 14(11)2024 May 23.
Artículo en Inglés | MEDLINE | ID: mdl-38869538

RESUMEN

Magnetoresistance, the change in resistance with applied magnetic fields, is crucial to the magnetic sensor technology. Linear magnetoresistance has been intensively studied in semimetals and semiconductors. However, the air-stable oxides with a large linear magnetoresistance are highly desirable but remain to be fully explored. In this paper, we report the direct observation of linear magnetoresistance in polycrystalline MoO2 without any sign of saturation up to 7 T under 50 K. Interestingly, the linear magnetoresistance reaches as large as 1500% under 7 T at 2 K. The linear field dependence is in great contrast to the parabolic behavior observed in single-crystal MoO2, probably due to phonon scattering near the grain boundaries. Our results pave the way to comprehending magneto-transport behavior in oxides and their potential applications in magnetic sensors.

9.
Chem Commun (Camb) ; 2024 Oct 09.
Artículo en Inglés | MEDLINE | ID: mdl-39380557

RESUMEN

Herein, we present a highly efficient copper-catalyzed protocol for transforming propargyl gem-dichlorides into the corresponding chloro-substituted fluoroalkylated allenes. This protocol demonstrates a broad substrate scope and excellent tolerance towards various functional groups. Moreover, the strategy of utilizing the chloro-substituted pentafluoroethylation allenes for multiple transformations has shown significant value in synthetic chemistry.

10.
Zhongguo Shi Yan Xue Ye Xue Za Zhi ; 31(2): 581-584, 2023 Apr.
Artículo en Zh | MEDLINE | ID: mdl-37096537

RESUMEN

Duodenal-type follicular lymphoma (DFL) is a unique subtype of follicular lymphoma (FL), which often involves the second portion of duodenum (descending part of duodenum). Due to its specific pathological features, such as lack of follicular dendritic cells meshwork and disappearance of activation-induced cytidine deaminase expression, DFL presents an inert clinical course and is often confined to the intestinal tract. Inflammation-related biomarkers suggest that the microenvironment may play a likely role in the pathogenesis and favorable prognosis of DFL. Since patients generally have no obvious clinical symptoms and low progression rate, the treatment regimen for DFL is mainly observation and waiting (W&W) strategy. This study will review the latest research progress of epidemiology, diagnosis, treatment and prognosis of DFL in recent years.


Asunto(s)
Neoplasias Duodenales , Linfoma Folicular , Humanos , Linfoma Folicular/tratamiento farmacológico , Neoplasias Duodenales/tratamiento farmacológico , Neoplasias Duodenales/patología , Pronóstico , Microambiente Tumoral
11.
Cancer Pathog Ther ; 1(2): 154-156, 2023 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-38328404

RESUMEN

Immune thrombocytopenia (ITP) is common in the elderly. Because of the coexistence of multiple diseases, there are many reservations regarding corticosteroid use in the elderly. Thrombopoietin (TPO) and its analogs can promote platelet production, but it is often difficult to correct TP in a short period. Recombinant human TPO (rh-TPO) acting on the cell membrane and the small-molecule TPO-receptor (MPL) agonist acting on the transmembrane receptor may have synergistic effects and accelerate platelet production because of different sites of action in the signaling pathway. In this study, two elderly patients with refractory ITP were successfully treated with two TPO-MPL signaling pathway agonists: recombinant human thrombopoietin (rh-TPO) and eltrombopag. This combination is safe with rapid and lasting effects. However, in elderly patients with refractory, recurrent, and glucocorticoid contraindications, the combination of different TPO agonists' clinical efficacy and adverse reactions needs to be further evaluated.

12.
Zhongguo Shi Yan Xue Ye Xue Za Zhi ; 31(2): 411-419, 2023 Apr.
Artículo en Zh | MEDLINE | ID: mdl-37096513

RESUMEN

OBJECTIVE: To explore the role of ferroptosis-related genes in multiple myeloma(MM) through TCGA database and FerrDb, and build a prognostic model of ferroptosis-related genes for MM patients. METHODS: Using the TCGA database containing clinical information and gene expression profile data of 764 patients with MM and the FerrDb database including ferroptosis-related genes, the differentially expressed ferroptosis-related genes were screened by wilcox.test function. The prognostic model of ferroptosis-related genes was established by Lasso regression, and the Kaplan-Meier survival curve was drawn. Then COX regression analysis was used to screen independent prognostic factors. Finally, the differential genes between high-risk and low-risk patients were screened, and enrichment analysis was used to explore the mechanism of the relationship between ferroptosis and prognosis in MM. RESULTS: 36 differential genes related to ferroptosis were screened out from bone marrow samples of 764 MM patients and 4 normal people, including 12 up-regulated genes and 24 down-regulated genes. Six prognosis-related genes (GCLM, GLS2, SLC7A11, AIFM2, ACO1, G6PD) were screened out by Lasso regression and the prognostic model with ferroptosis-related genes of MM was established. Kaplan-Meier survival curve analysis showed that the survival rate between high risk group and low risk group was significantly different(P<0.01). Univariate COX regression analysis showed that age, sex, ISS stage and risk score were significantly correlated with overall survival of MM patients(P<0.05), while multivariate COX regression analysis showed that age, ISS stage and risk score were independent prognostic indicators for MM patients (P<0.05). GO and KEGG enrichment analysis showed that the ferroptosis-related genes was mainly related to neutrophil degranulation and migration, cytokine activity and regulation, cell component, antigen processing and presentation, complement and coagulation cascades, haematopoietic cell lineage and so on, which may affect the prognosis of patients. CONCLUSION: Ferroptosis-related genes change significantly during the pathogenesis of MM. The prognostic model of ferroptosis-related genes can be used to predict the survival of MM patients, but the mechanism of the potential function of ferroptosis-related genes needs to be confirmed by further clinical studies.


Asunto(s)
Ferroptosis , Sistema Hematopoyético , Mieloma Múltiple , Humanos , Pronóstico , Coagulación Sanguínea
13.
Zhongguo Shi Yan Xue Ye Xue Za Zhi ; 31(1): 162-169, 2023 Feb.
Artículo en Zh | MEDLINE | ID: mdl-36765494

RESUMEN

OBJECTIVE: To screen the prognostic biomarkers of metabolic genes in patients with multiple myeloma (MM), and construct a prognostic model of metabolic genes. METHODS: The histological database related to MM patients was searched. Data from MM patients and healthy controls with complete clinical information were selected for analysis.The second generation sequencing data and clinical information of bone marrow tissue of MM patients and healthy controls were collected from human protein atlas (HPA) and multiple myeloma research foundation (MMRF) databases. The gene set of metabolism-related pathways was extracted from Molecular Signatures Database (MSigDB) by Perl language. The biomarkers related to MM metabolism were screened by difference analysis, univariate Cox risk regression analysis and LASSO regression analysis, and the risk prognostic model and Nomogram were constructed. Risk curve and survival curve were used to verify the grouping effect of the model. Gene set enrichment analysis (GSEA) was used to study the difference of biological pathway enrichment between high risk group and low risk group. Multivariate Cox risk regression analysis was used to verify the independent prognostic ability of risk score. RESULTS: A total of 8 mRNAs which were significantly related to the survival and prognosis of MM patients were obtained (P<0.01). As molecular markers, MM patients could be divided into high-risk group and low-risk group. Survival curve and risk curve showed that the overall survival time of patients in the low-risk group was significantly better than that in the high risk group (P<0.001). GSEA results showed that signal pathways related to basic metabolism, cell differentiation and cell cycle were significantly enriched in the high-risk group, while ribosome and N polysaccharide biosynthesis signaling pathway were more enriched in the low-risk group. Multivariate Cox regression analysis showed that the risk score composed of the eight metabolism-related genes could be used as an independent risk factor for the prognosis of MM patients, and receiver operating characteristic curve (ROC) showed that the molecular signatures of metabolism-related genes had the best predictive effect. CONCLUSION: Metabolism-related pathways play an important role in the pathogenesis and prognosis of patients with MM. The clinical significance of the risk assessment model for patients with MM constructed based on eight metabolism-related core genes needs to be confirmed by further clinical studies.


Asunto(s)
Mieloma Múltiple , Humanos , Ciclo Celular , Mieloma Múltiple/genética , Pronóstico , Factores de Riesgo
14.
Artículo en Inglés | MEDLINE | ID: mdl-35783522

RESUMEN

Objective: Fibrin sealant (FS) is widely used for skin wound healing, but data on porcine FS (PFS), a new type of FS, are limited. This study investigated the effects and potential mechanisms of porcine fibrin sealant (PFS) on skin wound healing in rats. Methods. Traumatic rats were randomly divided into three groups: control, PFS, and medical Vaseline. The wound area and wound index of the rats were measured within 14 days after surgery. Hematoxylin-eosin (H&E) staining and Masson staining were used to observe the pathological images and collagen formation on the wounded skin, respectively. To investigate the healing mechanisms, the enzyme-linked immunosorbent assay (ELISA) was used to detect platelet endothelial cell adhesion molecule-1 (CD31) and cluster of differentiation 34 (CD34) expression in the wounded skin. Additionally, quantitative real-time PCR (qRT-PCR) was used to evaluate the mRNA levels of the vascular endothelial growth factor (VEGF), fibroblast growth factor (FGF), and epidermal growth factor (EGF), and transforming growth factor-ß1 (TGF-ß1). Meanwhile, TGF-ß1 protein expression was assessed by Western blot analysis. Results: Compared with the control group, both PFS and medical Vaseline treatment significantly reduced the wounded area and increased the wound closure rate. H&E staining showed that the cells in the PFS group proliferated rapidly, and the epidermis and dermis were thickened to some extent with a clear epidermal cell structure. Moreover, PFS promoted the formation of collagen and significantly increased the levels of CD31 and CD34 and the growth factors in the skin tissues of the traumatic rats. Conclusion: PFS effectively promoted skin wound healing, especially in tissue formation, reepithelialization, angiogenesis, and collagen deposition, in traumatic rat models. This study provides a new strategy and scientific foundation for PFS application in skin wound healing.

15.
Zhongguo Shi Yan Xue Ye Xue Za Zhi ; 30(4): 1101-1108, 2022 Aug.
Artículo en Zh | MEDLINE | ID: mdl-35981368

RESUMEN

OBJECTIVE: To screen the differential expression of diffuse large B-cell lymphoma (DLBCL) autophagy-related gene (ARG), explore the mechanism of differential expression of autophagy gene (DEARG) in the occurrence and development of DLBCL and establish a prognostic model. METHODS: Using the NCICCR database containing clinical information and gene expression profile data of 481 patients with DLBCL and the HADb database containing 232 ARGs, the differential expression of ARG in DLBCL was determined by R language, the relationship between ARG and the occurrence and development of DLBCL was analyzed by GO and KEGG, the polygene prognostic model was established by Cox regression algorithm, the survival curve was drawn by Kaplan-Meier method, and the reliability of the prognostic model was evaluated by ROC curve. RESULTS: A total of 122 DEARGs were extracted from lymph node samples of 481 patients with DLBCL and 5 normal lymph nodes, including 4 up-regulated genes and 118 down-regulated genes. GO enrichment mainly focused on ontological annotations such as mitochondrial autophagy, autophagy regulation, and cell response to external stimuli. KEGG enrichment was mainly concentrated in cell senescence, NOD-like receptor signal pathway, PI3K-Akt signal pathway, and PD-1/PD-L1 signal pathway. Survival analysis was performed on 230 samples with complete clinical information. Univariate Cox analysis showed that 20 ARGs were significantly correlated with overall survival of DLBCL patients. Nine prognostic ARGs (HIF1A, CAPN1, ITPR1, PRKCQ, TRAIL, HDAC1, TSC2, NRG3, and MAPK3) were screened by multivariate Cox regression to establish DLBCL ARG prognostic model. Kaplan-Meier survival curve analysis showed that there was significant difference in survival rate between high risk group and low risk group (P<0.001). Multivariate Cox regression analysis showed that international prognostic index and risk value were independent prognostic indicators of DLBCL patients (P<0.05), the area under ROC curve was 0.762 and 0.747, respectively. CONCLUSION: DLBCL ARG prognostic model can be used to predict the prognosis of patients, but it still needs to be confirmed by a large sample of clinical studies.


Asunto(s)
Linfoma de Células B Grandes Difuso , Fosfatidilinositol 3-Quinasas , Autofagia , Biomarcadores de Tumor , Humanos , Linfoma de Células B Grandes Difuso/genética , Linfoma de Células B Grandes Difuso/patología , Pronóstico , Reproducibilidad de los Resultados
16.
Int Immunopharmacol ; 113(Pt A): 109416, 2022 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-36461605

RESUMEN

Inflammatory bowel disease (IBD), a progressive and unpredictable colorectal inflammatory disease, is a global health problem. Currently, therapeutic strategies for the management of the disease are limited. Results from our previous studies indicated that probiotic Lactobacillus plantarum exhibits therapeutic effects against IBD, and through screening, we obtained an active 61-amino-acid long protein, L. plantarum membrane protein 1 (LpMP-1). Based on druggability-guided strategies, the search for LpMPs with lower molecular weights and better bioactivities contributes to the development of new anti-inflammatory agents to overcome the limitations of existing therapies against IBD. We used amino-acid-truncation strategies to obtain modified LpMPs (LpMP-2 - LpMP-9) using LpMP-1 as the parent template. Furthermore, we systematically evaluated the anti-colitis pharmacodynamics of these LpMPs in terms of symptomatology, histopathology, and cytokine levels in DSS-induced ulcerative colitis mice. Their possible targets of action against IBD was investigated under an iTRAQ-based pharmacoproteomic system and a docking-guided receptor-ligand relationship frame. We found a new active protein, LpMP-8, which had a lower molecular weight than LpMP-1. LpMP-8 was found to exhibit anti-colitis activity following oral administration in vivo (50 µg/kg) by improving symptoms of colitis, colonic ulcerations, and cytokine disorders. TLRs and TGF-ß were found to be involved in the action of LpMP-8 against colitis; LpMP-8 was to compete with TLR4-MD2-bound LPS and reverse TGF-ß and Smad2/7 disorders. Our probiotic-derived LpMP-8 was shown to elicit oral anti-colitis activity, and its significant efficacy is probably associated with TLR4 and TGF-ß.


Asunto(s)
Colitis , Enfermedades del Colon , Enfermedades Inflamatorias del Intestino , Lactobacillus plantarum , Animales , Ratones , Sulfato de Dextran , Proteínas de la Membrana , Receptor Toll-Like 4 , Colitis/inducido químicamente , Colitis/tratamiento farmacológico , Antiinflamatorios/uso terapéutico , Enfermedades Inflamatorias del Intestino/tratamiento farmacológico , Citocinas , Factor de Crecimiento Transformador beta
17.
ACS Nano ; 16(6): 9329-9338, 2022 Jun 28.
Artículo en Inglés | MEDLINE | ID: mdl-35687375

RESUMEN

van der Waals heterostructures (vdWHs) overcoming the lattice and processing limitations of conventional heterostructures provide an opportunity to develop high-performance 2D vdWH solar cells and photodiodes. However, it is challenging to improve the sensitivity and response speed of 2D vdWH photovoltaic devices due to the low light absorption efficiency and electron/hole traps in heterointerfaces. Here, we design a PbS/MoS2/WSe2 heterostructure photodiode in which a light-sensitive PbS quantum dot (QD) layer combined with a MoS2/WSe2 heterostructure significantly enhances the photovoltaic response. The electron current in the heterostructure is increased by the effective collection of photogenerated electrons induced by PbS QDs. The device exhibits a broadband photovoltaic response from 405 to 1064 nm with a maximum responsivity of 0.76 A/W and a specific detectivity of 5.15 × 1011 Jones. In particular, the response speed is not limited by multiple electron traps in the PbS QDs/2D material heterointerface, and a fast rising/decaying time of 43/48 µs and a -3 dB cutoff frequency of over 10 kHz are achieved. The negative differential capacitance and frequency dependence of capacitance demonstrate the presence of interface states in the MoS2/WSe2 heterointerface that hamper the improvement of the response speed. The scheme to enhance photovoltaic performance without sacrificing response speed provides opportunities for the development of high-performance 2D vdWH optoelectronic devices.

18.
Transl Lung Cancer Res ; 11(6): 1119-1131, 2022 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-35832445

RESUMEN

Background: Although the prognosis of non-small cell lung cancer (NSCLC) can be assessed based on pathological type, disease stage and inflammatory indicators, the prognostic scoring model of NSCLC still needs to improve. HDAC11 is associated with poor prognosis of partial tumors, but its prognostic relationship with NSCLC is poorly understood. In this study, the role of HDAC11 in NSCLC was studied to evaluate relationship with disease prognosis and potential therapeutic target. Methods: The clinicopathological and paracancerous tissues of patients with NSCLC primarily diagnosed in Tangdu Hospital from 2009 to 2013 were collected. Follow-up of patients were made every three months and the last follow-up period was December 2018. The expression of HDAC11 was assessed by immunohistochemistry (IHC). Then, weighted gene co-expression network analysis (WGCNA) was used to analyze the relationship between HDAC11 expression and the prognosis of lung adenocarcinoma (LUAD) patients. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. Kaplan-Meier plotter database was used to verify the connection between hub genes and tumor stage and prognosis. We accessed the relationship between HDAC11 expression and clinicopathological features, and impact on the prognosis. Results: The study assessed 326 patients with NSCLC. Compared with adjacent tissues, HDAC11 expression was upregulated (HR =1.503, 95% CI: 1.172 to 1.927, P=0.001). Kaplan-Meier survival analyses showed that HDAC11 expression was closely related to OS of NSCLC patients (P=0.0011). Univariate and multivariate analyses showed that the independent risk factors of OS were clinical stage, HDAC11 expression, and HDAC11 differentiation (all P≤0.001). HDAC11 was significantly associated with prognosis in LUAD. A total of 1,174 differential genes and WGCNA were obtained to construct a co-expression network in LUAD. The GO and KEGG pathway enrichment analyses showed the relevance with staphylococcus aureus infection, NOD-like receptor signaling pathway, and others. The results of LUAD survival analysis showed that HDAC11-related genes NKX2-5 and FABP7 were significantly associated with LUAD prognosis. Conclusions: The high expression of HDAC11 is related to the poor prognosis of LUAD, and it is expected to become a therapeutic target and prognostic evaluation therapy for LUAD in the future. However, the relevant results need to be further studied and verified.

19.
Acta Pharmacol Sin ; 32(4): 512-8, 2011 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-21468085

RESUMEN

AIM: Widespread and repeated use of azoles, particularly fluconazole, has led to the rapid development of azole resistance in Candida albicans. We investigated the role of CaIPF14030 during the development of azole resistance in C albicans. METHODS: The expression of CaIPF14030 was measured by quantitative RT-PCR, and CaIPF14030 was disrupted by the hisG-URA3-hisG (URA-blaster) method. The sensitivity of C albicans to azoles was examined using a spot assay, and the intracellular ATP concentrations were measured by a luminometer. RESULTS: CaIPF14030 expression in C albicans was up-regulated by Ca(2+) in a calcineurin-dependent manner, and the protein was overexpressed during the stepwise acquisition of azole resistance. However, disruption or ectopic overexpression of CaIPF14030 did not affect the sensitivity of C albicans to azoles. Finally, we demonstrated that disruption of CaIPF14030 significantly increased intracellular ATP levels, and overexpression significantly decreased intracellular ATP levels in C albicans. CONCLUSION: CaIPF14030 may negatively modulate intracellular ATP levels during the development of azole resistance in C albicans.


Asunto(s)
Adenosina Trifosfato/metabolismo , Antifúngicos/farmacología , Azoles/farmacología , Candida albicans/efectos de los fármacos , Secuencia de Bases , Candida albicans/metabolismo , Cartilla de ADN , Farmacorresistencia Microbiana , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa
20.
Front Genet ; 12: 755245, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34868228

RESUMEN

This study aims to determine hub genes related to the incidence and prognosis of EGFR-mutant (MT) lung adenocarcinoma (LUAD) with weighted gene coexpression network analysis (WGCNA). From The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases, we used 253 EGFR-MT LUAD samples and 38 normal lung tissue samples. At the same time, GSE19188 was additionally included to verify the accuracy of the predicted gene. To discover differentially expressed genes (DEGs), the R package "limma" was used. The R packages "WGCNA" and "survival" were used to perform WGCNA and survival analyses, respectively. The functional analysis was carried out with the R package "clusterProfiler." In total, 1450 EGFR-MT-specific DEGs were found, and 7 tumor-related modules were marked with WGCNA. We found 6 hub genes in DEGs that overlapped with the tumor-related modules, and the overexpression level of B3GNT3 was significantly associated with the worse OS (overall survival) of the EGFR-MT LUAD patients (p < 0.05). Functional analysis of the hub genes showed the metabolism and protein synthesis-related terms added value. In conclusion, we used WGCNA to identify hub genes in the development of EGFR-MT LUAD. The established prognostic factors could be used as clinical biomarkers. To confirm the mechanism of those genes in EGFR-MT LUAD, further molecular research is required.

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