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1.
BMC Genomics ; 25(1): 414, 2024 Apr 26.
Artículo en Inglés | MEDLINE | ID: mdl-38671371

RESUMEN

BACKGROUND: Growth rate is a crucial economic trait for farmed animals, but the genetic regulation of this trait is largely unknown in non-model organisms such as shrimp. RESULTS: In this study, we performed genome-wide phenotypic quantitative trait loci (QTL) and expression quantitative trait loci (eQTL) mapping analyses to identify genes affecting the growth rate of Pacific white shrimp (Litopenaeus vannamei), which is the most commercially-farmed crustacean worldwide. We used RNA-sequencing of 268 individuals in a mapping population, and subsequently validated our findings through gene silencing and shrimp growth experiments. We constructed a high-density genetic linkage map comprising 5533 markers spanning 44 linkage groups, with a total distance of 6205.75 cM and an average marker interval of 1.12 cM. Our analyses identified 11 QTLs significantly correlated with growth rate, and 117,525 eQTLs. By integrating QTL and eQTL data, we identified a gene (metalloreductase STEAP4) highly associated with shrimp growth rate. RNA interference (RNAi) analysis and growth experiments confirmed that STEAP4 was significantly correlated with growth rate in L. vannamei. CONCLUSIONS: Our results indicate that the comprehensive analysis of QTL and eQTL can effectively identify genes involved in complex animal traits. This is important for marker-assisted selection (MAS) of animals. Our work contributes to the development of shrimp breeding and available genetic resources.


Asunto(s)
Mapeo Cromosómico , Penaeidae , Sitios de Carácter Cuantitativo , Animales , Penaeidae/genética , Penaeidae/crecimiento & desarrollo , Fenotipo , Ligamiento Genético , Estudio de Asociación del Genoma Completo , Interferencia de ARN
2.
Mol Ecol ; 32(24): 6939-6952, 2023 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-37902115

RESUMEN

Despite the known collective contribution of above- (plants) and below-ground (soil fungi) biodiversity on multiple soil functions, how the associations among plant and fungal communities regulate soil multifunctionality (SMF) differentially remains unknown. Here, plant communities were investigated at 81 plots across a typical arid inland river basin, within which associated soil fungal communities and seven soil functions (nutrients storage and biological activity) were measured in surface (0-15 cm) and subsurface soil (15-30 cm). We evaluated the relative importance of species richness and biotic associations (reflected by network complexity) on SMF. Our results demonstrated that plant species richness and plant-fungus network complexity promoted SMF in surface and subsurface soil. SMF in two soil layers was mainly determined by plant-fungus network complexity, mean groundwater depth and soil variables, among which plant-fungus network complexity played a crucial role. Plant-fungus network complexity had stronger effects on SMF in surface soil than in subsurface soil. We present evidence that plant-fungus network complexity surpassed plant-fungal species richness in determining SMF in surface and subsurface soil. Moreover, plant-fungal species richness could not directly affect SMF. Greater plant-fungal species richness indirectly promoted SMF since they ensured greater plant-fungal associations. Collectively, we concluded that interkingdom networks between plants and fungi drive SMF even in different soil layers. Our findings enhanced our knowledge of the underlying mechanisms that above- and below-ground associations promote SMF in arid inland river basins. Future study should place more emphasis on the associations among plant and microbial communities in protecting soil functions under global changes.


Asunto(s)
Ríos , Suelo , Microbiología del Suelo , Plantas/microbiología , Biodiversidad , Hongos/genética , Ecosistema
3.
Int J Mol Sci ; 24(14)2023 Jul 18.
Artículo en Inglés | MEDLINE | ID: mdl-37511332

RESUMEN

DNA methylation is an important epigenetic modification that has been shown to be associated with responses to non-biological stressors. However, there is currently no research on DNA methylation in response to environmental signals in shrimp. In this study, we conducted a comprehensive comparative analysis of DNA methylation profiles and differentially expressed genes between two strains of Litopenaeus vannamei with significantly different cold tolerance through whole genome bisulfite sequencing (WGBS) and transcriptome sequencing. Between Lv-C and Lv-T (constant temperature of 28 °C and low temperatures of 18 °C and 10 °C) under cytosine-guanine (CG) environments, 39,100 differentially methylated regions (DMRs) were identified, corresponding to 9302 DMR-related genes (DMRGs). The DMRs were mainly located in the gene body (exons and introns). Gene Ontology (GO) analysis showed that these DMRGs were significantly enriched in cell parts, catalytic activity, and metabolic processes. Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis showed significant enrichment of these DMRGs in pathways such as proteasome (ko03050), oxidative phosphorylation (ko00190), mTOR signaling pathway (ko04150), fatty acid metabolism (ko01212), and fatty acid degradation (ko00071). The comprehensive results suggested that L. vannamei mainly regulates gene expression in response to low temperatures through hypermethylation or demethylation of some genes involved in thermogenesis, glycolysis, the autophagy pathway, the peroxisome, and drug metabolism pathways. These results provide important clues for studying DNA methylation patterns and identifying cold tolerance genes in shrimp.


Asunto(s)
Epigénesis Genética , Transcriptoma , Animales , Epigenoma , Genoma , Metilación de ADN , Crustáceos , Ácidos Grasos
4.
BMC Genomics ; 21(1): 857, 2020 Dec 02.
Artículo en Inglés | MEDLINE | ID: mdl-33267780

RESUMEN

BACKGROUND: Ammonia is one of the most common toxicological environment factors affecting shrimp health. Although ammonia tolerance in shrimp is closely related to successful industrial production, few genetic studies of this trait are available. RESULTS: In this study, we constructed a high-density genetic map of the Pacific white shrimp (Litopenaeus vannamei) using specific length amplified fragment sequencing (SLAF-seq). The constructed genetic map contained 17,338 polymorphic markers spanning 44 linkage groups, with a total distance of 6360.12 centimorgans (cM) and an average distance of 0.37 cM. Using this genetic map, we identified a quantitative trait locus (QTL) that explained 7.41-8.46% of the phenotypic variance in L. vannamei survival time under acute ammonia stress. We then sequenced the transcriptomes of the most ammonia-tolerant and the most ammonia-sensitive individuals from each of four genetically distinct L. vannamei families. We found that 7546 genes were differentially expressed between the ammonia-tolerant and ammonia-sensitive individuals. Using QTL analysis and the transcriptomes, we identified one candidate gene (annotated as an ATP synthase g subunit) associated with ammonia tolerance. CONCLUSIONS: In this study, we constructed a high-density genetic map of L. vannamei and identified a QTL for ammonia tolerance. By combining QTL and transcriptome analyses, we identified a candidate gene associated with ammonia tolerance. Our work provides the basis for future genetic studies focused on molecular marker-assisted selective breeding.


Asunto(s)
Amoníaco , Sitios de Carácter Cuantitativo , Amoníaco/toxicidad , Animales , Mapeo Cromosómico , Ligamiento Genético , Marcadores Genéticos , Penaeidae
5.
Fish Shellfish Immunol ; 106: 357-364, 2020 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-32791095

RESUMEN

The Penaeus stylirostris densovirus (PstDNV) is a major virus of shrimps that severely harms the shrimp farming industry. Peritrophin is a peritrophic membrane protein with chitin binding activity. To examine the roles of peritrophin in viral infection, we used yeast two-hybrid to analyze the interaction between the Pacific white shrimp (Litopenaeus vannamei) peritrophin and PstDNV proteins (CP, NS1 and NS2). The yeast two-hybrid results showed that NS1 and peritrophin had an interaction, CP and peritrophin had an interaction as well, and NS2 had no interaction with peritrophin. We validated the interactions with GST pull-down assays. We then conducted RNA interference and qRT-PCR. The results showed that when pre-injection of dsRNA-peritrophin, the quantity of PstDNV in the shrimps injected with viruses was significantly lower than in the control group (P < 0.01), indicating the viral infection was decreased when the peritrophin gene expression was inhibited. The results indicated that peritrophin of L. vannamei participated in the PstDNV infection.


Asunto(s)
Proteínas de Artrópodos/genética , Proteínas de Artrópodos/inmunología , Densovirinae/fisiología , Penaeidae/genética , Penaeidae/inmunología , Animales , Proteínas de la Cápside/fisiología , Interferencia de ARN , Reacción en Cadena en Tiempo Real de la Polimerasa , Proteínas no Estructurales Virales/fisiología
6.
Fish Shellfish Immunol ; 86: 101-106, 2019 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-30447431

RESUMEN

The Penaeus stylirostris densovirus (PstDNV) (also known as infectious hypodermal and hematopoietic necrosis virus, IHHNV), a very small DNA virus, is a major shrimp pathogen. The PstDNV genome encodes only two nonstructural proteins and one capsid protein. This virus is thus an ideal, simple model for the investigation of virus-host interactions. To explore the role of the PstDNV capsid in viral infections, a yeast two-hybrid (Y2H) cDNA library was constructed based on Pacific white shrimp, Litopenaeus vannamei mRNA. The Y2H library was then screened, using the PstDNV capsid protein as bait. We identified a host protein that interacted strongly with the PstDNV capsid as L. vannamei troponin I (LvTnI). An in vitro co-immunoprecipitation experiment further supported this interaction. In addition, an in vivo neutralization experiment showed that the vaccination with anti-LvTnI significantly reduced PstDNV copies in PstDNV-challenged shrimp, indicating that the interaction between the PstDNV capsid and cellular LvTnI is essential for PstDNV infection. This result has important implications for our understanding of the mechanisms by which PstDNV infects shrimp.


Asunto(s)
Proteínas de la Cápside/metabolismo , Densovirus/fisiología , Penaeidae/virología , Troponina I/metabolismo , Animales , Interacciones Huésped-Patógeno , Penaeidae/metabolismo
7.
Fish Shellfish Immunol ; 88: 198-206, 2019 May.
Artículo en Inglés | MEDLINE | ID: mdl-30826413

RESUMEN

Viral capsid proteins play an important role in the viral infection process. To identify the cellular proteins in shrimp that interact with the Penaeus stylirostris densovirus capsid protein (PstDNV-CP), we constructed a yeast two-hybrid (Y2H) cDNA library of the muscle tissue of Litopenaeus vannamei, and hybridized the bait vector pGBKT7-CP with this library. Cloning and sequencing showed that the shrimp protein interacting with PstDNV-CP was a homolog of BRCA2 and CDKN1A(p21)-interacting protein (BCCIP). We named this protein L. vannamei BCCIP (LvBCCIP). Further analysis showed that LvBCCIP interacted with L. vannamei calmodulin (LvCaM). We validated the interactions between PstDNV-CP and LvBCCIP, and between LvBCCIP and LvCaM, with GST pulldown assays. The gene expression of LvBCCIP increased significantly after PstDNV challenge. In addition, the PstDNV titer of PstDNV-challenged shrimp was significantly reduced after LvBCCIP expression was inhibited using double-stranded RNA (dsRNA) interference. These results indicated that LvBCCIP is critical to PstDNV pathogenesis in L. vannamei. Interestingly, the growth rate of L. vannamei was significantly reduced when LvBCCIP gene expression was silenced, indicating that LvBCCIP may also be associated with growth regulation in L. vannamei. Thus, the interaction between PstDNV-CP and LvBCCIP might explain why PstDNV infection leads to runt-deformity syndrome in shrimp.


Asunto(s)
Proteínas de la Cápside/metabolismo , Densovirus/fisiología , Penaeidae/virología , Animales , Proteína BRCA2/metabolismo , Calmodulina/metabolismo , Inhibidor p21 de las Quinasas Dependientes de la Ciclina/metabolismo , Expresión Génica , Penaeidae/crecimiento & desarrollo , Interferencia de ARN
8.
BMC Anesthesiol ; 18(1): 116, 2018 08 18.
Artículo en Inglés | MEDLINE | ID: mdl-30121078

RESUMEN

BACKGROUND: Mechanical ventilation (MV) can provide effective breathing support; however, ventilatior-induced lung injury (VILI) has also been widely recognized in clinical practice, including in the healthy lung. Unfortunately, the morbidity and mortality of VILI remain unacceptably high, and no satisfactory therapeutic effect can be achieved. The current study aimed to examine the effects of iron chelator preconditioning on the mitochondrial reactive oxygen species (ROS) in alveolar macrophages and pathological lung injury in VILI. METHODS: Twenty four healthy male Sprague-Dawley (SD) rats (250-300 g in weight) were randomly divided into 3 groups, including the control group (NC group, n = 8), the high-volume mechanical ventilation group (HV group, n = 8), and the deferoxamine treatment group (HV + DFO group, n = 8). Rats in the HV and HV + DFO groups were subjected to high-volume MV at a dose of 40 ml/kg. DFO was administered at a dose of 200 mg/kg 15 min prior to over-ventilation. Spontaneously breathing anesthetized rats were used as the controls. The animals were sacrificed after 4 h of high-volume ventilation or under control conditions, the animals were sacrificed. Purified alveolar macrophages from bronchoalveolar lavage fluid (BALF) and lung tissue were collected for further analysis through light microscopy and flow cytometry. RESULTS: Compared with the controls, the high-volume-ventilated rats had exhibited typical lung edema and histological lung injury, and ROS were markedly increased in alveolar macrophages and mitochondria. Moreover, all indices of VILI were remarkably different in rats treated with DFO preconditioning. DFO could ameliorate lung injury in the mechanically ventilated SD rat model. CONCLUSIONS: DFO preconditioning contributes to mitigating the histological lung damage while reducing ROS levels in alveolar macrophages and mitochondria, suggesting that iron metabolism in alveolar macrophages may participate in VILI.


Asunto(s)
Deferoxamina/farmacología , Pulmón/patología , Macrófagos Alveolares/metabolismo , Especies Reactivas de Oxígeno/metabolismo , Lesión Pulmonar Inducida por Ventilación Mecánica/prevención & control , Animales , Modelos Animales de Enfermedad , Edema/complicaciones , Edema/prevención & control , Masculino , Mitocondrias/metabolismo , Distribución Aleatoria , Ratas , Lesión Pulmonar Inducida por Ventilación Mecánica/complicaciones , Lesión Pulmonar Inducida por Ventilación Mecánica/patología
9.
Front Psychol ; 15: 1330078, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38577117

RESUMEN

Introduction: When doctors' work stress increases, their joy in work decreases, severely affecting the quality of care and threatening patient safety. Analysis of the latent categories of joy in work of doctors in public hospitals and the differences in the characteristics of each category can help uncover hidden messages that enhance doctors' joy in work. Methods: Questionnaires were administered to 426 doctors working in public hospitals using the general information questionnaire and the public hospital doctor's joy in work evaluation scale. Upon identifying their potential categories using latent profile analysis, chi-square test, and multinomial logistic regression were performed to analyze the differences in the characteristics of each category. Results: The 426 public hospital doctors could be divided into three potential categories: "low joy in work" (11.27%), "medium joy in work" (59.86%), and "high joy in work" (28.87%). Most of the doctors did not have much joy in work, with 71.13% of them having "low to medium joy in work." Doctors who work in secondary or tertiary hospitals, have a personnel agency or contract, and are older than 45 years are more likely to belong to the "low joy in work" category. Some of the protective factors are having an average monthly income (RMB) of 10,001-15,000 yuan and having a fair or good self-rated health status. Conclusion: There are obvious classification characteristics of doctors' level of joy in work. Hospital managers can take commensurate actions to improve their joy in work, thereby improving patient safety and the quality of medical services.

10.
Sci Rep ; 14(1): 15242, 2024 07 02.
Artículo en Inglés | MEDLINE | ID: mdl-38956131

RESUMEN

The cold tolerance of Litopenaeus vannamei is important for breeding in specific areas. To explore the cold tolerance mechanism of L. vannamei, this study analyzed biochemical indicators, cell apoptosis, and metabolomic responses in cold-tolerant (Lv-T) and common (Lv-C) L. vannamei under low-temperature stress (18 °C and 10 °C). TUNEL analysis showed a significant increase in apoptosis of hepatopancreatic duct cells in L. vannamei under low-temperature stress. Biochemical analysis showed that Lv-T had significantly increased levels of superoxide dismutase (SOD) and triglycerides (TG), while alanine aminotransferase (ALT), alkaline phosphatase (ALP), lactate dehydrogenase (LDH-L), and uric acid (UA) levels were significantly decreased compared to Lv-C (p < 0.05). Metabolomic analysis displayed significant increases in metabolites such as LysoPC (P-16:0), 11beta-Hydroxy-3,20-dioxopregn-4-en-21-oic acid, and Pirbuterol, while metabolites such as 4-Hydroxystachydrine, Oxolan-3-one, and 3-Methyldioxyindole were significantly decreased in Lv-T compared to Lv-C. The differentially regulated metabolites were mainly enriched in pathways such as Protein digestion and absorption, Central carbon metabolism in cancer and ABC transporters. Our study indicate that low temperature induces damage to the hepatopancreatic duct of shrimp, thereby affecting its metabolic function. The cold resistance mechanism of Lv-T L. vannamei may be due to the enhancement of antioxidant enzymes and lipid metabolism.


Asunto(s)
Apoptosis , Frío , Respuesta al Choque por Frío , Metabolómica , Penaeidae , Animales , Penaeidae/metabolismo , Penaeidae/fisiología , Metabolómica/métodos , Metaboloma , Superóxido Dismutasa/metabolismo
11.
Int J Biol Macromol ; 262(Pt 2): 129984, 2024 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-38342260

RESUMEN

The ATP-binding cassette (ABC) transporters have crucial roles in various biological processes such as growth, development and immune defense in eukaryotes. However, the roles of ABC transporters in the immune system of crustaceans remain elusive. In this study, 38 ABC genes were systematically identified and characterized in Penaeus vannamei. Bioinformation analysis revealed that PvABC genes were categorized into ABC A-H eight subfamilies with 17 full-transporters, 11 half transporters and 10 soluble proteins, and multiple immunity-related cis-elements were found in gene promoter regions. Expression analysis showed that most PvABC genes were widely and highly expressed in immune-related tissues and responded to the stimulation of Vibrio parahaemolyticus. To investigate whether PvABC genes mediated innate immunity, PvABCC5, PvABCF1 and PvABCB4 were selected for dsRNA interference experiment. Knockdown of PvABCF1 and PvABCC5 not PvABCB4 increased the cumulative mortality of P. vannamei and bacterial loads in hepatopancreas after infection with V. parahaemolyticus. Further analysis showed that the PvABCF1 and PvABCC5 knockdown decreased expression levels of NF-κB pathway genes and antimicrobial peptides (AMPs). Collectively, these findings indicated that PvABCF1 and PvABCC5 might restrict V. parahaemolyticus challenge by positively regulating NF-κB pathway and then promoting the expression of AMPs, which would contribute to overall understand the function of ABC genes in innate immunity of invertebrates.


Asunto(s)
Penaeidae , Vibrio parahaemolyticus , Animales , FN-kappa B/genética , FN-kappa B/metabolismo , Vibrio parahaemolyticus/genética , Penaeidae/genética , Penaeidae/microbiología , Transportadoras de Casetes de Unión a ATP/genética , Transportadoras de Casetes de Unión a ATP/metabolismo , Proteínas de Artrópodos/genética , Transducción de Señal , Inmunidad Innata/genética , Adenosina Trifosfato/metabolismo
12.
Opt Express ; 21(8): 10222-7, 2013 Apr 22.
Artículo en Inglés | MEDLINE | ID: mdl-23609730

RESUMEN

Femtosecond laser-irradiation-induced phase change of a new amorphous Si(2)Sb(2)Te(3) film with a good thermal stability and low reset current is studied by coherent phonon spectroscopy. New coherent optical phonons (COP) occur as laser irradiation fluence reaches some threshold, implying laser-induced phase change emerged. The compositions in phase-changed area revealed by COP modes agree well with ones in reported annealed crystallized film, implying laser-induced phase change as crystallization. Pump fluence dependence of COP dynamics reveals good crystallization quality of the phase-changed film, exhibiting promising application of Si(2)Sb(2)Te(3) films in optical phase change memory. Acoustic phonons are also found and identified.


Asunto(s)
Cristalización/métodos , Rayos Láser , Membranas Artificiales , Silicio/química , Silicio/efectos de la radiación , Análisis Espectral/métodos , Ensayo de Materiales , Fotones
14.
Artículo en Inglés | MEDLINE | ID: mdl-36674092

RESUMEN

Exploring more emissions reduction opportunities for China's energy sector and lowering China's decarbonisation costs are essential to fulfilling China's nationally determined contributions (NDCs) and making China's sustainable development more feasible. This study explored emissions reduction opportunities for China's energy sector in international bilateral emissions trading systems (ETSs) using a CGE (computable general equilibrium) model. This study revealed that linking China's ETS to those of regions with lower decarbonisation responsibilities, which tend to be developing regions, could lower China's carbon prices, thus increasing China's domestic energy supply and lowering energy prices (and vice versa). Meanwhile, the volume of emissions from regions linked to China also significantly affected the degree of the change in China's carbon prices. Among these, ETS links to India and Russia could reduce China's carbon price from 7.80 USD/ton under domestic ETS to 2.16 USD/ton and 6.79 USD/ton, allowing the energy sector and energy-intensive sectors to increase greenhouse gas emissions by 1.14% and 7.05%, respectively, without falling short of meeting its NDC targets. In contrast, as a consequence of links with the United States and the European Union, China's carbon price could increase to 5.37 USD/ton and 1.79 USD/ton, respectively, which would limit China's energy and energy-intensive sectors to emitting 5.45% and 2.24% fewer greenhouse gases in order to meet its NDC targets.


Asunto(s)
Gases de Efecto Invernadero , Industrias , China , Carbono/análisis , Dióxido de Carbono/análisis
15.
Front Plant Sci ; 14: 1142753, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-36968396

RESUMEN

Phytomelatonin is a pleiotropic signaling molecule that regulates plant growth, development, and stress response. In plant cells, phytomelatonin is synthesized from tryptophan via several consecutive steps that are catalyzed by tryptophan decarboxylase (TDC), tryptamine 5-hydroxylase (T5H), serotonin N-acyltransferase (SNAT), and N-acetylserotonin methyltransferase (ASMT) and/or caffeic acid-3-O-methyltransferase (COMT). Recently, the identification of the phytomelatonin receptor PMTR1 in Arabidopsis has been considered a turning point in plant research, with the function and signal of phytomelatonin emerging as a receptor-based regulatory strategy. In addition, PMTR1 homologs have been identified in several plant species and have been found to regulate seed germination and seedling growth, stomatal closure, leaf senescence, and several stress responses. In this article, we review the recent evidence in our understanding of the PMTR1-mediated regulatory pathways in phytomelatonin signaling under environmental stimuli. Based on structural comparison of the melatonin receptor 1 (MT1) in human and PMTR1 homologs, we propose that the similarity in the three-dimensional structure of the melatonin receptors probably represents a convergent evolution of melatonin recognition in different species.

16.
Ying Yong Sheng Tai Xue Bao ; 34(8): 2133-2141, 2023 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-37681377

RESUMEN

To clarify the key factors constraining the maintenance of wild Taxus cuspidata populations and to develop conservation strategies and technical links for current populations, we investigated the renewal status and distribution patterns of wild T. cuspidata populations in the main distribution areas of China. We analyzed the effects of stand factors and human disturbance on population renewal and maintenance. The results showed that the overall regeneration of wild T. cuspidata populations was poor. The basal diameter and height class structure of renewed individuals showed an unhealthy state. 19% of the area was well regenerated. There were three types of regeneration, including poor regeneration with few adult trees, poor regeneration with many adult trees, and good regeneration with few adult trees. The communities in which T. cuspidata was found could be classified into Abies nephrolepis + Tilia amurensis forest, spinney forest, and Picea jezoensis var. microsperma + A. nephrolepis forest. The renewal number of A. nephrolepis + T. amurensis forest was significantly higher than that of spinney forest. Increased stand density and moderate human disturbance contributed to the regeneration of T. cuspidata. The regenerating T. cuspidata seedlings increased significantly when stand density increased from low to medium. The number of regenerating populations in moderately disturbed habitats was significantly higher than those in lightly disturbed habitats. Human disturbance and habitat were currently critical constraints to maintaining and regenerating wild T. cuspidata populations. The conservation of T. cuspidata should consider current status of population regeneration in each habitat patch to develop corresponding in situ conservation and regression conservation measures and focus on the influence of critical factors such as disturbances and habitat conditions.


Asunto(s)
Picea , Taxus , Tracheophyta , Adulto , Humanos , Bosques , Árboles , China
17.
Genes (Basel) ; 14(12)2023 12 08.
Artículo en Inglés | MEDLINE | ID: mdl-38137012

RESUMEN

Procambarus clarkii is the most widely distributed freshwater shrimp in China, with important economic value and great potential for development. The forkheadboxL2 (Foxl2) gene has been found to be involved in the reproductive development of many crustaceans. To understand the role of the Foxl2 gene in the gonad development of P. clarkii, we designed CDS-specific primers for the P. clarkii Foxl2 (PcFoxl2) gene and cloned its CDS sequence using RT-PCR. The nucleotide and protein sequence information was then analyzed through bioinformatics analysis. The expression and subcellular localization of PcFoxl2 in various tissues were detected using qRT-PCR and in situ hybridization. The effects of PcFoxl2 knockdown on gonad development were investigated using RNA interference. The results showed that the CDS length of the PcFoxl2 gene was 1614 bp and encoded 537 amino acids. Protein sequence comparison and phylogenetic analysis showed that PcFoxl2 was the closest relative to Crayfish. qRT-PCR analysis indicated that the expression level of PcFoxl2 in the testis was significantly higher (>40 fold) than that in the ovary (p < 0.01). The in situ hybridization results showed that PcFoxl2 was expressed in both the cytoplasm and the nucleus of egg cells, and that the expression was strongest in egg cells at the early stage of yolk synthesis, while weak in the secondary oocytes. The positive signal was strongest in the spermatocyte nucleolus, while only a trace signal was observed in the cytoplasm. After interfering with the PcFoxl2 gene using dsRNA, the expression of PcFoxl2 in the RNA interference group was significantly lower than that in the control group, and this interference effect lasted for one week. Moreover, the gonad index of the experimental group was significantly lower than that of the control group (p < 0.05) after 10 days of P. clarkii cultivation following PcFoxl2 knockdown. The expression levels of the nanos and S3a genes, which are related to gonad development, decreased significantly after PcFoxl2 gene interference. The results suggest that the Foxl2 gene is involved in the growth and development of gonads, particularly in the development of testis, and is related to the early development of oocytes. This study provides a theoretical basis for the artificial breeding of P. clarkii.


Asunto(s)
Astacoidea , Masculino , Animales , Femenino , Astacoidea/genética , Filogenia , Secuencia de Aminoácidos , Reacción en Cadena de la Polimerasa , Clonación Molecular
18.
ACS Omega ; 7(7): 5791-5803, 2022 Feb 22.
Artículo en Inglés | MEDLINE | ID: mdl-35224339

RESUMEN

Organic matter (OM) is the material basis for hydrocarbon generation. Its type and abundance determine the hydrocarbon generation ability of source rocks, which is closely related to the provenance and sedimentary environment of source rocks. The tectonic backgrounds of the eastern and western subsags (ESS and WSS) of the Lishui Sag in the East China Sea Shelf Basin are significantly different and their influence on the OM in the source rocks is worthy of attention. This paper comprehensively analyzes the provenance and environmental characteristics and their influence on the features of the OM of Paleocene source rocks in the ESS and WSS. The study finds that the source rocks in the ESS have multiple sources. During the deposition period, as the salinity and paleoproductivity of the water column increased, the proportion of OM in the autochthonous components of the water column continued to increase, but the overall water column was in an oxidizing environment, resulting in a generally low abundance of OM. The provenance of the source rocks in the WSS was relatively simple and terrestrial. Also, the sedimentary environment had little effect on the type of OM. However, the whole water column of the WSS was in an anoxic environment, so the OM was better preserved, resulting in a higher abundance. Due to the influence of provenance and the sedimentary environment in different areas of the sag, the characteristics of OM in the source rocks are different, so relevant exploration strategies need to be adopted in actual exploration.

19.
Int J Biol Macromol ; 222(Pt A): 599-609, 2022 Dec 01.
Artículo en Inglés | MEDLINE | ID: mdl-36170929

RESUMEN

In the current study, the effects of fermentation manners on the structure and immunomodulatory activity of polysaccharide in longan wine or vinegar were investigated. Compared to longan polysaccharide (CP1), polysaccharide in longan wine (CP2) or vinegar (CP3 and CP4) had smaller molecular weights, and was consisted of more mannose, arabinose, rhamnose, galactose and less glucose. After purification, the major fraction (P1-P4) was obtained from CP1-CP4, respectively. The structures and immunoregulatory activities of P1-P4 were characterized. Fermentation and purification were favorable to increase the immunoregulatory activities of P2-P4, which were contributed to their different structural features. The structure-activity relationship analysis indicated that molecular weight, mannose, rhamnose, glucuronic acid, glucose and arabinose were significantly associated with the cytokines secretion. Compared with other polysaccharides, P3 displayed better immunomodulatory activity due to its lower molecular weight, lower contents of rhamnose and glucose, and higher levels of mannose and arabinose by activating MAPK and PI3K/Akt signaling pathways.


Asunto(s)
Arabinosa , Manosa , Fermentación , Ramnosa , Ácido Acético , Fosfatidilinositol 3-Quinasas , Polisacáridos/farmacología , Polisacáridos/química , Glucosa
20.
Int J Public Health ; 67: 1604988, 2022.
Artículo en Inglés | MEDLINE | ID: mdl-36147882

RESUMEN

Objective: To delineate the mortality trends of malignant tumors, heart disease and cerebrovascular disease in China. Methods: The crude mortality from 2003 to 2019 was derived from the China Health Statistical Yearbook, and the mortality rates were analyzed through joinpoint regression supplemented by descriptive statistics and χ2 tests. Results: The fitting model of age-standardized mortality due to malignant tumors showed three joinpoints. The APCs from 2003 to 2005, 2005-2008, 2008-2012 and 2012-2019 were -11.00%, 9.63%, -4.67% and -1.40%, respectively, and the AAPC was -1.54%. The mortality rate of cerebrovascular disease consistently decreased (APC = AAPC = -0.98%). In the subgroup analyses, significant differences were observed between sexes and regions. The mortality rate of heart disease among rural females exhibited an upward trend (APC = AAPC = 2.33%). Older adults aged over 75 years had the highest mortality rates and the most drastic change. Conclusion: The three diseases had variable change trends. The government should focus more on policies that promote the equalization of basic public health services. Continuous education on heart disease, which includes not only beneficial behaviors but also knowledge of first aid, should be strengthened for rural females.


Asunto(s)
Trastornos Cerebrovasculares , Cardiopatías , Neoplasias , Anciano , Causas de Muerte , China/epidemiología , Femenino , Humanos , Mortalidad , Población Rural
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