The effects of compost incorporation on soil physical properties in urban soils - A concise review.

Incorporation of compost into soil can significantly alter soil physical properties, nutrient dynamics, and vegetation establishment. Strategic compost application to disturbed, degraded urban soil may provide benefits to soil properties. This review compared twenty-five peer-reviewed studies that evaluated changes in soil bulk density, infiltration rate, hydraulic conductivity, and water retention where compost was incorporated into urban soils. A wide range of compost rates and incorporation depths were evaluated in these studies across many soil types. Compost incorporation generally reduced bulk density, enhanced infiltration and hydraulic conductivity, and increased water content and plant available water, compared to unamended controls. In the four studies on runoff water quality, compost incorporation often resulted in higher initial nutrient content in runoff water, but also enhanced grass growth and reduced sediment loss. Few studies evaluated multiple compost application rates or incorporation depths, and the ways in which compost application rates were reported varied widely between studies making it difficult to directly compare them. Four studies investigated the long-term effects of compost incorporation, and there was no clear pattern of why some soils display enhanced physical properties over time and others do not. Compost was largely reported to have a positive effect on degraded urban soils. Little research has focused on the longevity of compost in urban soils after one application, and thus, this would be a valuable topic of further investigation.

Soil compost amendment enhances tomato (Solanum lycopersicum L.) quality.

BACKGROUND: Tomato (Solanum lycopersicum L.) is one of the most important crops in the world and represents a key crop in southern Italy. With the aim to evaluate the nutritional characteristics of tomato fruits in relation to NPK and compost fertilisation, the concentrations of the main nutrients, toxic elements, primary metabolites and total phenols were determined in two varieties (Lido and San Marzano). Each variety was cultivated in a different experimental field, subjected to different agronomic techniques. RESULTS: Concentrations of toxic elements (Cd and Pb) were below the limits indicated by the EU Regulation (2011) in all the fruits analysed. Moreover, fruits obtained from San Marzano plants grown on organic amended soils showed a better overall quality than those obtained on mineral fertilised soil, being characterised by lower N (attributed to lower nitrate and nitrite concentrations), lower Cd, and higher soluble sugar concentrations. Higher concentrations of soluble sugars in fruits from organic amended soils were also observed in the Lido variety. CONCLUSIONS: The agricultural use of quality compost represents an effective strategy to obtain high quality products in an economically and environmentally sustainable way. © 2016 Society of Chemical Industry.

Fate of Escherichia coli O157:H7 and Salmonella in soil and lettuce roots as affected by potential home gardening practices.

BACKGROUND: The survival and distribution of enteric pathogens in soil and lettuce systems were investigated in response to several practices (soil amendment supplementation and reduced watering) that could be applied by home gardeners. RESULTS: Leaf lettuce was grown in manure compost/top soil (0:5, 1:5 or 2:5 w/w) mixtures. Escherichia coli O157:H7 or Salmonella was applied at a low or high dose (10(3) or 10(6) colony-forming units (CFU) mL(-1) ) to the soil of seedlings and mid-age plants. Supplementation of top soil with compost did not affect pathogen survival in the soil or on root surfaces, suggesting that nutrients were not a limiting factor. Salmonella populations on root surfaces were 0.7-0.8 log CFU g(-1) lower for mid-age plants compared with seedlings. E. coli O157:H7 populations on root surfaces were 0.8 log CFU g(-1) lower for mid-age plants receiving 40 mL of water compared with plants receiving 75 mL of water on alternate days. Preharvest internalization of E. coli O157:H7 and Salmonella into lettuce roots was not observed at any time. CONCLUSION: Based on the environmental conditions and high pathogen populations in soil used in this study, internalization of Salmonella or E. coli O157:H7 into lettuce roots did not occur under practices that could be encountered by inexperienced home gardeners.

Short- and long-term effects of continuous compost amendment on soil microbiome community.

Organic amendment, and especially the use of composts, is a well-accepted sustainable agricultural practice. Compost increases soil carbon and microbial biomass, changes enzymatic activity, and enriches soil carbon and nitrogen stocks. However, relatively little is known about the immediate and long-term temporal dynamics of agricultural soil microbial communities following repeated compost applications. Our study was conducted at two field sites: Newe Ya'ar (NY, Mediterranean climate) and Gilat (G, semi-arid climate), both managed organically over 4 years under either conventional fertilization (0, zero compost) or three levels of compost amendment (20, 40 and 60 m3/ha or 2, 4, 6 L/m2). Microbial community dynamics in the soils was examined by high- and low-time-resolution analyses. Annual community composition in compost-amended soils was significantly affected by compost amendment levels in G (first, second and third years) and in NY (third year). Repeated sampling at high resolution (9-10 times over 1 year) showed that at both sites, compost application initially induced a strong shift in microbial communities, lasting for up to 1 month, followed by a milder response. Compost application significantly elevated alpha diversity at both sites, but differed in the compost-dose correlation effect. We demonstrate higher abundance of taxa putatively involved in organic decomposition and characterized compost-related indicator taxa and a compost-derived core microbiome at both sites. Overall, this study describes temporal changes in the ecology of soil microbiomes in response to compost vs. conventional fertilization.

Coordination of bacterial biomarkers with the dominant microbes enhances triclosan biodegradation in soil amended with food waste compost and cow dung compost.

Increasing concerns regarding the micropollutant triclosan (TCS) derive from its potential threats to human health and ecological security. Compost addition have been verified to be effective in soil remediation, however, the biodegradation of TCS under compost amendment in soil remain unclear. This study investigated the removal of TCS in soils amended with food waste compost (FS), cow dung compost (CS) and sludge compost (SS), respectively, explored the key TCS-degraders and biological mechanisms of TCS removal. Compost addition significantly enhanced the removal of TCS (p < 0.05) in the order of FS > CS > SS. The dosage of 20% (w/w) was the most efficient one and the ultimate concentrations of TCS were decreased by 76.67%, 67.90% and 56.79% compared with CK, respectively. The abundance of key dominant bacterial genus (7 in FS and 4 in CS) and fungal genus (3 in FS and CS) was stimulated due to the increase of soil nutrient factors (including dissolved organic carbon, DOC; soil organic matter, SOM; ammonium nitrogen, NH4+; nitrate nitrogen, NO3-) and the decrease of pH. A negative correlation between these dominant microbes and TCS concentration indicated their potential effect on TCS degradation. A total of four bacterial biomarkers, namely Saccharomonospora, Aequorivita, Bacillaceae and Fodinicurvataceae (both at family level) were the key TCS-degraders. Structural equation model (SEM) indicated that the improvement of soil nutrient factors in FS and CS promoted TCS biodegradation by improving the activity of bacterial biomarkers, as while, the key dominant microbes showed good tolerance to TCS stress. However, there were no significant biological effects on TCS in SS group. Network analysis further confirmed that it was the coordination of bacterial biomarkers with the dominant microbes that enhanced TCS biodegradation in soil amended with food waste compost and cow dung compost.

Organic Amendments Alter Soil Hydrology and Belowground Microbiome of Tomato (Solanum lycopersicum).

Manure-derived organic amendments are a cost-effective tool that provide many potential benefits to plant and soil health including fertility, water retention, and disease suppression. A greenhouse experiment was conducted to evaluate how dairy manure compost (DMC), dairy manure compost-derived vermicompost (VC), and dehydrated poultry manure pellets (PP) impact the tripartite relationship among plant growth, soil physiochemical properties, and microbial community composition. Of tomato plants with manure-derived fertilizers amendments, only VC led to vigorous growth through the duration of the experiment, whereas DMC had mixed impacts on plant growth and PP was detrimental. Organic amendments increased soil porosity and soil water holding capacity, but delayed plant maturation and decreased plant biomass. Composition of bacterial communities were affected more by organic amendment than fungal communities in all microhabitats. Composition of communities outside roots (bulk soil, rhizosphere, rhizoplane) contrasted those within roots (endosphere). Distinct microbial communities were detected for each treatment, with an abundance of Massilia, Chryseolinea, Scedosporium, and Acinetobacter distinguishing the control, vermicompost, dairy manure compost, and dehydrated poultry manure pellet treatments, respectively. This study suggests that plant growth is affected by the application of organic amendments not only because of the soil microbial communities introduced, but also due to a synergistic effect on the physical soil environment. Furthermore, there is a strong interaction between root growth and the spatial heterogeneity of soil and root-associated microbial communities.

Bacterial Community Dynamics Distinguish Poultry Compost from Dairy Compost and Non-Amended Soils Planted with Spinach.

The aim of this study was to determine whether and how poultry litter compost and dairy manure compost alter the microbial communities within field soils planted with spinach. In three successive years, separate experimental plots on two fields received randomly assigned compost treatments varying in animal origin: dairy manure (DMC), poultry litter (PLC), or neither (NoC). The composition and function of bacterial and fungal communities were characterized by the amplicon sequencing of marker genes and by the ecoenzyme activity, respectively. The temporal autocorrelation within and among years was adjusted by principal response curves (PRC) to analyze the effect of compost on community composition among treatments. Bacteria in the phylum Bacteriodetes, classes Flavobacteriia and Spingobacteriales (Fluviicola, Flavobacteriia, and Pedobacter), were two to four times more abundant in soils amended with PLC than DMC or NoC consistently among fields and years. Fungi in the phylum Ascomycota were relatively abundant, but their composition was field-specific and without treatment differences. The ecoenzyme data verify that the effects of PLC and DMC on soil communities are based on their microbial composition and not a response to the C source or nutrient content of the compost.

Biosolid compost with wood shavings and yard trimmings alleviates stress and improves grain quality in soybean grown in lead polluted soils.

Heavy metals induce stress in plants, thereby affecting growth, crop quality, and food security. Most studies addressing the mitigation of these effects by soil amendment have focused on metals in soils and plant uptake, with there still being a great deal of uncertainty about how amendment application in polluted soils can modify plant stress response and, consequently, yield and food safety. Thus, the aim of this study was to evaluate the effect of biosolid compost amendment on stress response, growth, and lead accumulation in Glycine max, when applied to lead polluted agricultural soils. Soybean was grown in lead polluted soils with 0%, 5%, or 10% (w/w) biosolid compost amendment under controlled conditions in a greenhouse, and the stress response indicators chlorophylls, proteins, sugars, malondialdehyde, glutathione S-transferase activity, carotenes, and the ferric reducing antioxidant power were investigated. In addition, the biomass and lead accumulation in different organs were determined and evaluated with respect to the plant stress. Our results revealed that the addition of 10% biosolid compost improved the grain biomass and appeared to reduce the amount of defective grains, which was related to higher Pb concentrations. Furthermore, 10% compost treatment reduced the stress in plants, leading to a better performance of the photosynthetic system, and with the antioxidant response being positively correlated to Pb accumulation. Lead uptake in plants was decreased by between 35 and 57% after this treatment in comparison with unamended soils. These results indicate that biosolid compost amendment may be an effective way to alleviate Pb uptake and metal stress in soybeans.

Mars Regolith Simulant Ameliorated by Compost as in situ Cultivation Substrate Improves Lettuce Growth and Nutritional Aspects.

Heavy payloads in future shuttle journeys to Mars present limiting factors, making self-sustenance essential for future colonies. Therefore, in situ resources utilization (ISRU) is the path to successful and feasible space voyages. This research frames the concept of planting leafy vegetables on Mars regolith simulant, ameliorating this substrate's fertility by the addition of organic residues produced in situ. For this purpose, two butterhead lettuce (Lactuca sativa L. var. capitata) cultivars (green and red Salanova®) were chosen to be cultivated in four different mixtures of MMS-1 Mojave Mars simulant:compost (0:100, 30:70, 70:30 and 100:0; v:v) in a phytotron open gas exchange growth chamber. The impact of compost rate on both crop performance and the nutritive value of green- and red-pigmented cultivars was assessed. The 30:70 mixture proved to be optimal in terms of crop performance, photosynthetic activity, intrinsic water use efficiency and quality traits of lettuce. In particular, red Salanova® showed the best performance in terms of these quality traits, registering 32% more phenolic content in comparison to 100% simulant. Nonetheless, the 70:30 mixture represents a more realistic scenario when taking into consideration the sustainable use of compost as a limited resource in space farming, while still accepting a slight significant decline in yield and quality in comparison to the 30:70 mixture.

Bioavailability Evaluation of Dissolved Organic Matter Derived from Compost-Amended Soils.

In this study, hetero-two-dimensional correlation spectroscopy (hetero-2DCOS) combined with parallel factor analysis (PARAFAC) was employed to reveal the inner changes in the dissolved organic matter (DOM) components derived from soil amended with seven different composts. The dynamics of the four DOM components showed that the fluorescence peaks in each component varied in different directions during mineralization. Structural equation models (SEMs) demonstrated that the compost amendments changed the correlations of the total organic carbon (TOC), total nitrogen (TN), and bacterial community composition with DOM components and strengthened the cooperative function related to transformation of DOM components. The compost sources were further ranked as cabbage waste (CW) > chicken manure (CM), dairy cattle manure (DCM), tomato stem waste (TSW), peat (P) > municipal solid waste (MSW), sewage sludge (SS) by projection pursuit regression (PPR) analysis. It is helpful to improve the bioavailability of compost products to obtain composts with a particular function.

Soil amendment alters soil physicochemical properties and bacterial community structure of a replanted apple orchard.

Compost amendment reportedly improved apple tree growth in replant soils. However, its effects should be evaluated at different soil depths and locations. This study investigated the impact of soil improvement with compost on soil physicochemical properties and bacterial community structure of a replanted apple orchard in comparison with the original orchard without compost improvement. The V1-V3 region of the bacterial 16S rRNA gene was subjected to high-throughput 454 pyrosequencing, and data were analyzed using the Mothur pipeline. The results showed that the soil improvement benefited tree growth and fruit quality during the study period. The compost amendment markedly increased tree height and stem diameter by a range of 6.1%-21.0% and 4.0%-14.0%, respectively. Fruit yield (9.5%), average weight (9.6%), and soluble solid content (5.6%) were also increased by compost amendment compared to those of the unimproved treatment. The pH, organic matter, and available N, P, and K contents were significantly increased by 5.7%-21.9%, 0.2%-62.9%, 9.3%-29.3%, 36.7%-64.5%, and 17.2%-100.3% in the compost improved soil. The pyrosequencing data showed that the soil improvement changed the bacterial community structure at all soil depths (0-20 cm and 20-40 cm) and locations (in-row and inter-row) considered; e.g., the relative abundance of Proteobacteria (20.2%), Bacteroidetes (2.5%), and Cyanobacteria (1.0%) was increased while that of Chloroflexi (5.5%), Acidobacteria (5.2%), Nitrospirae (4.5%), Gemmatimonadetes (3.8%), and Actinobacteria (1.8%) was decreased. The relative abundance of some dominant genera Burkholderia (2.3%), Pseudomonas (1.0%), and Paenibacillus (0.5%) were enhanced in the compost improved soil. Moreover, other dominant genera such as Nitrospira (6.4%), Gemmatimonas (2.2%), and Phenylobacterium (0.3%) were reduced by the application of compost. Our results indicate that soil improvement benefits the growth of tree and fruit quality, and is likely mediated by increased soil pH, organic matter, and available nutrient contents and beneficial bacterial community composition.

Anthracene and benzo(a)pyrene degradation in soil is favoured by compost amendment: Perspectives for a bioremediation approach.

In order to validate the use of compost in soil PAH bioremediation, the degradation of anthracene and benzo(a)pyrene was monitored in soils artificially contaminated and incubated in mesocosms under controlled conditions. The dynamics observed in compost amended soil were compared to those observed in soil added with a fungal consortium and untreated soil. At the same time, three microbial enzyme activities usually involved in PAH degradation (laccase, o-diphenol oxidase and peroxidase activities) were monitored. Both PAHs decreased along the time in the three mesocosms, with anthracene, with lower molecular weight, degrading with a higher rate and reaching lower residual values than benzo(a)pyrene. Although at the end of incubation, the residual values of investigated PAHs are similar in the three mesocosm types, PAH dynamics showed a higher degradation rate in the early stage in mesocosms added with the fungal mycelium and amended with compost. Among the three enzyme activities, only peroxidase showed higher values in treated than untreated mesocosms. Considering the ameliorating effects of compost on degraded soils, its use can be suggested in PAH bioremediation.

Nutrient and toxic element soil concentrations during repeated mineral and compost fertilization treatments in a Mediterranean agricultural soil.

Agricultural soils of semi-arid Mediterranean areas are often subjected to depletion of their chemical, physical, and biological properties. In this context, organic fertilization, in addition to providing nutrients for a longer time in respect to mineral fertilization, improves many other characteristics related to soil fertility. Moreover, the combined use of organic and mineral fertilizers may promote a more sustainable crop production. However, a concern on the long-term use of organic fertilizers arises in relation to the possible accumulation of toxic elements in soil and their transfer to human beings. For this reason, a long-term study on nutrient and toxic element total concentrations and availabilities during fertilization treatments was carried out. In particular, mineral NPK fertilized soils, soils amended with biowaste compost, soils amended with biowaste compost plus mineral nitrogen, and unfertilized soils were analyzed for 11 chemical elements. The results highlighted that temporal variations in total and bioavailable concentrations of both nutrients and toxic elements, occurring also in unfertilized soils, are wider than those related to fertilization treatments. Anyway, soil amendments with biowaste compost, alone or in combination with mineral fertilizers, reduce Cu bioavailability but improve K, Fe, Mn, and Zn availabilities, excluding at the same time a long-term accumulation in soil. Total and bioavailable toxic element concentrations (apart from available Cd) do not vary in relation to fertilization treatments.

Arsenic and Lead Uptake by Vegetable Crops Grown on an Old Orchard Site Amended with Compost.

The potential for lead (Pb) and arsenic (As) transfer into vegetables was studied on old orchard land contaminated by lead arsenate pesticides. Root (carrot), leafy (lettuce), and vegetable fruits (green bean, tomato) were grown on seven "miniplots" with soil concentrations ranging from near background to ≈ 800 and ≈ 200 mg kg-1 of total Pb and As, respectively. Each miniplot was divided into sub-plots and amended with 0% (control), 5% and 10% (by weight) compost and cropped for 3 years. Edible portions of each vegetable were analyzed for total Pb and As to test the effect of organic matter on transfer of these toxic elements into the crop. Vegetable Pb and As concentrations were strongly correlated to soil total Pb and As, respectively, but not to soil organic matter content or compost addition level. For Pb vegetable concentrations, carrot ≥ lettuce > bean > tomato. For As, lettuce > carrot > bean > tomato. A complementary single-year study of lettuce, arugula, spinach, and collards revealed a beneficial effect of compost in reducing both Pb and As concentrations in leafy vegetables. Comparisons of all measured vegetable concentrations to international health-based standards indicate that tomatoes can be grown without exceeding standards even in substantially Pb- and As-contaminated soils, but carrots and leafy greens may exceed standards when grown in soils with more than 100-200 mg kg-1 Pb. Leafy greens may also exceed health-based standards in gardens where soil As is elevated, with arugula having a particularly strong tendency to accumulate As.