RESUMEN
The research results of the growth-promoting effects of endophytic bacteria on Phyllostachys edulis indicated that the growth-promoting endophytic bacteria could improve photosynthesis in P. edulis leaves. The photosynthetic rate, transpiration rate, and the stomatal conductance in P. edulis treated with endophytic bacteria were all higher than in the control group. Endophytic bacteria could also increase the chlorophyll content and the protective enzyme activities in P. edulis, improving their reactions to the adverse environmental conditions. Through injection treatments with growth-promoting endophytic bacteria, the catalase, superoxide dismutase (SOD), peroxidase activity, soluble protein content, and soluble sugar content in P. edulis were all higher than in the control group, except for the malondialdehyde content, which was lower than in the control group.
Asunto(s)
Bacterias/aislamiento & purificación , Bambusa/microbiología , Endófitos/aislamiento & purificación , Bacterias/clasificación , Bacterias/genética , Bambusa/crecimiento & desarrollo , Bambusa/metabolismo , Catalasa/metabolismo , Clorofila/metabolismo , Endófitos/clasificación , Endófitos/genética , Malondialdehído/metabolismo , Fotosíntesis , Proteínas de Plantas/metabolismo , Superóxido Dismutasa/metabolismoRESUMEN
BACKGROUND: Lignocellulosic biomass from bamboo is an attractive feedstock for the bioethanol industry owing to its high cellulosic content and fast growth rate. In this study, powdery biomass was first enzymatically delignified and then saccharified using crude enzymes. RESULTS: The biological pretreatment decreased the lignin content of the biomass from an initial value of 295 to 137.7 g kg-1 , with a simultaneous increase in exposed cellulose content from 379.3 to 615.9 g kg-1 . For optimization of the saccharification, response surface methodology was adopted using a three-factor/three-level Box-Behnken design with crude fungal cellulase loading (FPU g-1 substrate), substrate concentration (% w/v) and saccharification temperature (°C) as the main process parameters. A maximum saccharification yield of 47.19% was achieved under the optimized conditions (cellulase enzyme 18.4 FPU g-1 substrate, substrate concentration 1.0% w/v, temperature 39.49 °C). Biological delignification and saccharification of the biomass were further confirmed through scanning electron microscopy analysis. CONCLUSION: It is evident from the study that bamboo, as a renewable energy bioresource, can be hydrolysed to reducing sugars by using crude laccase/cellulase enzymes of fungal origin with good saccharification yield. Thus crude enzyme preparations could be utilized efficiently for eco-friendly and cost-effective bioethanol production. © 2018 Society of Chemical Industry.
Asunto(s)
Bambusa/química , Biotecnología/métodos , Celulasa/química , Etanol/química , Proteínas Fúngicas/química , Polyporaceae/enzimología , Bambusa/metabolismo , Bambusa/microbiología , Biocatálisis , Biocombustibles/análisis , Biomasa , Celulasa/metabolismo , Celulosa/química , Celulosa/metabolismo , Fermentación , Proteínas Fúngicas/metabolismo , Hidrólisis , Lacasa/química , Lacasa/metabolismo , Lignina/química , Lignina/metabolismo , Polyporaceae/genética , Polyporaceae/aislamiento & purificación , Polyporaceae/metabolismo , TemperaturaRESUMEN
An important and useful bamboo species, fishscale bamboo (Phyllostachys heteroclada Oliver), is broadly distributed in Southeast China and has multiple purposes, including uses in cuisine, weaving, Chinese medicine and ecological protection. However, no previous studies have focused on the endophytes of this plant. In our article, a total of 127 fungal strains were first isolated from the healthy branches and leaves of common P. heteroclada. These endophytic fungi could be directly categorized into 50 morphotypes according to their culture characteristics, and their internal transcribed spacer (ITS) regions were analyzed for molecular identification. Using the BLAST search tool of the NCBI database and phylogenetic tree analysis, these isolates were divided into two phyla, Ascomycota (95.28%) and Basidiomycota (4.72%), including at least six orders (Xylariales, Capnodiales, Pleosporales, Hypocreales, Chaetothyriales and Polyporales) and fourteen genera (Arthrinium, Pestalotiopsis, Epicoccum, Cladosporium, Nigrospora, Setophoma, Didymella, Calcarisporium, Preussia, Nemania, Creosphaeria, Ophiobolus, Phialophora and Perenniporia). It is fascinating that four genera, Calcarisporium, Preussia, Creosphaeria and Phialophora were isolated from bamboos for the first time. The inhibitory effects against clinical pathogens were also preliminarily screened, and four isolates FB43 (Calcarisporium arbuscula), FB06 (Preussia minima), FB16 (Setophoma sp.) and FB21 (Perenniporia medulla-pains) among the candidate strains displayed broad-spectrum activities according to the agar diffusion method and the disk diffusion assay. Strain FB16 (Setophoma sp.) especially indicated high bioactivity against both clinical bacteria and yeast. This study is the first report on the diversity and antimicrobial activity of the endophytic fungi associated with P. heteroclada, which could be regarded as a potential source of drug precursors and could be used in biocontrol development.
Asunto(s)
Bambusa/microbiología , Hongos/clasificación , Análisis de Secuencia de ADN/métodos , Antiinfecciosos/metabolismo , ADN de Hongos/genética , Hongos/aislamiento & purificación , Hongos/metabolismo , Filogenia , Hojas de la Planta/microbiología , Tallos de la Planta/microbiologíaRESUMEN
Bambusa balcooa is an economically important, multipurpose bamboo species, decidedly used in construction industry. Availability of natural bamboo is depleting very rapidly due to accelerated deforestation and its unrestrained use. The large number and timely supply of saplings are the need of the hour for the restoration of bamboo stands. Micropropagation, being the potent alternative for season independent rapid regeneration, is restricted in bamboo because of endophytic contamination. An in vitro attempt has been taken to overcome the endophytic contamination by using broad spectrum antibiotics as surface sterilant as well as a media component. Ampicillin sodium salt (5 mg/ml for 30 min) as a surface sterilant was found as the best treatment for high bud breaking (80%) coupled with high branching and low contamination (20%) but it was found ineffective to control the contamination during multiplication stage. Then, two endophytes were isolated and minimum inhibitory concentration was determined through antibiotic susceptibility test for successful eradication at multiplication stage. Finally, contamination free cultures were obtained when streptocycline (100 µg/ml) and gentamicin sulphate (75 µg/ml) were added into the medium. The two isolated endophytes, BB1 and BB2, were identified through 16S rDNA techniques and NCBI-BLAST algorithm with 99% sequence similarity with those of Janibacter sp. (KX423734) and Serratia marcescens strain (KX423735). To our knowledge, this is the first report for B. balcooa where antibiotics were used as surface sterilant as well as medium component, to control endophytic bacterial contaminants, followed by their identification.
Asunto(s)
Actinobacteria/efectos de los fármacos , Antibacterianos/farmacología , Bambusa/microbiología , Endófitos/efectos de los fármacos , Serratia marcescens/efectos de los fármacos , Actinobacteria/genética , Actinobacteria/crecimiento & desarrollo , Actinobacteria/aislamiento & purificación , Bambusa/efectos de los fármacos , Bambusa/crecimiento & desarrollo , ADN Bacteriano/genética , ADN Ribosómico/genética , Endófitos/genética , Endófitos/crecimiento & desarrollo , Endófitos/aislamiento & purificación , Pruebas de Sensibilidad Microbiana , Filogenia , Análisis de Secuencia de ADN , Homología de Secuencia de Ácido Nucleico , Serratia marcescens/genética , Serratia marcescens/crecimiento & desarrollo , Serratia marcescens/aislamiento & purificaciónRESUMEN
Microbial community structure and population dynamics during spontaneous bamboo shoot fermentation for production of 'soidon' (indigenous fermented food) in North-east India were studied using cultivation-dependent and cultivation-independent molecular approaches. Cultivation-dependent analyses (PCR-amplified ribosomal DNA restriction analysis and rRNA gene sequencing) and cultivation-independent analyses (PCR-DGGE, qPCR and Illumina amplicon sequencing) were conducted on the time series samples collected from three independent indigenous soidon fermentation batches. The current findings revealed three-phase succession of autochthonous lactic acid bacteria to attain a stable ecosystem within 7 days natural fermentation of bamboo shoots. Weissella spp. (Weissella cibaria, uncultured Weissella ghanensis) and Lactococcus lactis subsp. cremoris predominated the early phase (1-2 days) which was joined by Leuconostoc citreum during the mid-phase (3 days), while Lactobacillus brevis and Lactobacillus plantarum emerged and became dominant in the late phase (5-7 days) with concurrent disappearance of W. cibaria and L. lactis subsp. cremoris. Lactococcus lactis subsp. lactis and uncultured Lactobacillus acetotolerans were predominantly present throughout the fermentation with no visible dynamics. The above identified dominant bacterial species along with their dynamics can be effectively utilized for designing a starter culture for industrialization of soidon production. Our results showed that a more realistic view on the microbial ecology of soidon fermentation could be obtained by cultivation-dependent studies complemented with cultivation-independent molecular approaches. Moreover, the critical issues to be considered for reducing methodological biases while studying the microbial ecology of traditional food fermentation were also highlighted with this soidon fermentation model.
Asunto(s)
Bambusa/microbiología , Fermentación , Microbiología de Alimentos , Lactobacillaceae/crecimiento & desarrollo , Leuconostoc/crecimiento & desarrollo , Leuconostocaceae/crecimiento & desarrollo , ADN Bacteriano/genética , Ecosistema , India , Ácido Láctico , Lactobacillaceae/clasificación , Leuconostoc/clasificación , Leuconostocaceae/clasificación , Metagenoma , Datos de Secuencia Molecular , Filogenia , Análisis de Secuencia de ADNRESUMEN
Leclercia adecarboxylata is a rarely described motile, aerobic, gram-negative bacillus reported to cause clinically significant solitary infections in immunocompromised patients and polymicrobial wound infections in immunocompetent patients [1-5]. We present a case of a polymicrobial infection including L. adecarboxylata in a healthy female patient with a subungual splinter, to increase awareness and aid in the diagnosis and treatment of cutaneous L. adecarboxylata infections. To our knowledge, this is the first reported case of trauma-related subungual L. adecarboxylata infection reported in the dermatology literature.
Asunto(s)
Infecciones por Enterobacteriaceae/microbiología , Enterobacteriaceae/aislamiento & purificación , Traumatismos de los Dedos/microbiología , Cuerpos Extraños/microbiología , Infección de Heridas/microbiología , Adulto , Antibacterianos/uso terapéutico , Bambusa/microbiología , Cefalexina/uso terapéutico , Coinfección/tratamiento farmacológico , Coinfección/microbiología , Doxiciclina/uso terapéutico , Enterobacteriaceae/patogenicidad , Infecciones por Enterobacteriaceae/tratamiento farmacológico , Femenino , Humanos , Inmunocompetencia , Mupirocina/uso terapéutico , Uñas , Infecciones Estafilocócicas/tratamiento farmacológico , Infecciones Estafilocócicas/microbiología , Infección de Heridas/tratamiento farmacológicoRESUMEN
Two marine bacteria, designated strains MBE#61(T) and MBE#74(T), were isolated from a piece of sunken bamboo in the marine environment in Japan. Both of these strains were Gram-stain-negative, but had different cell shapes: MBE#61(T) was spiral, whereas MBE#74(T) was rod-shaped. The temperature, pH and salt concentration ranges for growth of strain MBE#61(T) were 4-38 °C (optimal at 32 °C), pH 4.5-11.0 (optimal at pH 7.0-8.0) and 1-11â% (optimal at 2â%) NaCl, whereas those of strain MBE#74(T) were 4-36 °C (optimal at 30 °C), pH 4.0-10.5 (optimal at pH 7.0-8.0) and 1-12â% (optimal at 4â%) NaCl. Phylogenetic analysis based on partial 16S rRNA gene sequences revealed that both strains belong to the genus Thalassospira within the class Alphaproteobacteria. Similarity between the 16S rRNA gene sequence of strain MBE#61(T) and those of the type strains of species of the genus Thalassospira was 97.5-99.0â%, and that of strain MBE#74(T) was 96.9-98.6â%; these two isolates were most closely related to Thalassospira lucentensis QMT2(T). However, the DNA-DNA hybridization values between T. lucentensis QMT2(T) and strain MBE#61(T) or MBE#74(T) were only 16.0â% and 7.1â%, respectively. The DNA G+C content of strain MBE#61(T) was 54.4 mol%, and that of strain MBE#74(T) was 55.9 mol%. The predominant isoprenoid quinone of the two strains was Q-10 (MBE#61(T), 97.3â%; MBE#74(T), 93.5â%). The major cellular fatty acids of strain MBE#61(T) were C18â:â1ω7c (31.1â%), summed feature 3 comprising C16â:â0ω7c/iso-C15â:â0 2-OH (26.1â%) and C16â:â0 (20.9â%); those of strain MBE#74(T) were C16â:â0 (26.2â%), C17â:â0 cyclo (19.9â%) and C18â:â1ω7c (12.1â%). On the basis of these results, strain MBE#61(T) and strain MBE#74(T) are considered to represent novel species of the genus Thalassospira, for which names Thalassospira alkalitolerans sp. nov. and Thalassospira mesophila sp. nov. are proposed. The type strains are MBE#61(T) (â=âJCM 18968(T)â=âCECT 8273(T)) and MBE#74(T) (â=âJCM 18969(T)â=âCECT 8274(T)), respectively. An emended description of the genus Thalassospira is also proposed.
Asunto(s)
Alphaproteobacteria/clasificación , Bambusa/microbiología , Filogenia , Agua de Mar/microbiología , Alphaproteobacteria/genética , Alphaproteobacteria/aislamiento & purificación , Técnicas de Tipificación Bacteriana , Composición de Base , ADN Bacteriano/genética , Ácidos Grasos/química , Sedimentos Geológicos/microbiología , Japón , Datos de Secuencia Molecular , Hibridación de Ácido Nucleico , ARN Ribosómico 16S/genética , Rhodospirillaceae/genética , Rhodospirillaceae/metabolismo , Análisis de Secuencia de ADN , Ubiquinona/químicaRESUMEN
A Gram-stain-positive, aerobic, motile by gliding, rod-shaped bacterial strain, THG-GM18(T), was isolated from soil of a bamboo grove. Strain THG-GM18(T) was able to grow in the presence of up to 6.0â% (w/v) NaCl, at 4-37 °C and at pH 7.0-10.0 in R2A medium. Based on 16S rRNA gene sequence similarity, strain THG-GM18(T) was closely related to species of the genus Arthrobacter. The most closely related strains to strain THG-GM18(T) are Arthrobacter ramosus CCM 1646(T) (98.5â% similarity), Arthrobacter nitroguajacolicus G2-1(T) (98.4â%), Arthrobacter nicotinovorans DSM 420(T) (98.2â%), Arthrobacter aurescens DSM 20116(T) (98.1â%) and Arthrobacter chlorophenolicus A6(T) (98.0â%). Strain THG-GM18(T) possessed chemotaxonomic properties consistent with those of members of the genus Arthrobacter, such as peptidoglycan type A3α (l-Lys-l-Ala-l-Thr-l-Ala), MK-9 as major menaquinone and anteiso- and iso-branched compounds (anteiso-C15â:â0, iso-C16â:â0 and anteiso-C17â:â0) as major cellular fatty acids. The polar lipid profile contained diphosphatidylglycerol, phosphatidylglycerol, an unidentified phosphoglycolipid, unidentified phospholipids, unidentified aminolipids, an unidentified glycolipid and unidentified lipids. The G+C content of the genomic DNA was 61.0 mol%. The DNA-DNA relatedness values between strain THG-GM18(T) and its closest phylogenetic neighbours were below 26.0â%. The results of physiological and biochemical tests allowed the differentiation of strain THG-GM18(T) from species of the genus Arthrobacter with validly published names. Arthrobacter bambusae sp. nov. is the proposed name, and the type strain is THG-GM18(T) (â=âKACC 17531(T)â=âJCM 19335(T)).
Asunto(s)
Arthrobacter/clasificación , Bambusa/microbiología , Filogenia , Microbiología del Suelo , Arthrobacter/genética , Arthrobacter/aislamiento & purificación , Técnicas de Tipificación Bacteriana , Composición de Base , ADN Bacteriano/genética , Ácidos Grasos/química , Datos de Secuencia Molecular , Hibridación de Ácido Nucleico , ARN Ribosómico 16S/genética , República de Corea , Análisis de Secuencia de ADN , Vitamina K 2/análogos & derivados , Vitamina K 2/químicaRESUMEN
A pink-pigmented, Gram negative, aerobic, facultatively methylotrophic bacterium, strain BL44(T), was isolated from bamboo leaves and identified as a member of the genus Methylobacterium. Phylogenetic analysis based on 16S rRNA gene sequences showed similarity values of 98.7-97.0 % with closely related type strains and showed highest similarity to Methylobacterium zatmanii DSM 5688(T) (98.7 %) and Methylobacterium thiocyanatum DSM 11490(T) (98.7 %). Methylotrophic metabolism in this strain was confirmed by PCR amplification and sequencing of the mxaF gene coding for the α-subunit of methanol dehydrogenase. Strain BL44(T) produced three known quorum sensing signal molecules with similar retention time to C8, C10 and C12-HSLs when characterized by GC-MS. The fatty acid profiles contained major amounts of C18:1 ω7c, iso-3OH C17:0 and summed feature 3 (C16:1 ω7c and/or iso-C15:0 2-OH), which supported the grouping of the isolate in the genus Methylobacterium. The DNA G+C content was 66.9 mol%. DNA relatedness of the strain BL44(T) to its most closely related strains ranged from 12-43.3 %. On the basis of the phenotypic, phylogenetic and DNA-DNA hybridization data, strain BL44(T) is assigned to a novel species of the genus Methylobacterium for which the name Methylobacterium pseudosasae sp. nov. is proposed (type strain BL44(T) = NBRC 105205(T) = ICMP 17622(T)).
Asunto(s)
Bambusa/microbiología , Metanol/metabolismo , Methylobacterium/clasificación , Methylobacterium/aislamiento & purificación , Hojas de la Planta/microbiología , Acil-Butirolactonas/análisis , Oxidorreductasas de Alcohol/genética , Composición de Base , Análisis por Conglomerados , ADN Bacteriano/química , ADN Bacteriano/genética , ADN Ribosómico/química , ADN Ribosómico/genética , Ácidos Grasos/análisis , Methylobacterium/genética , Methylobacterium/metabolismo , Datos de Secuencia Molecular , Hibridación de Ácido Nucleico , Filogenia , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADNRESUMEN
A Gram-positive filamentous bacterial strain that developed large campanulate sporangia at the ends of sporangiophores on substrate mycelium was isolated from bamboo forest soil in Thailand. According to the results of a polyphasic taxonomic study, our isolate had typical characteristics of members of the genus Actinoplanes. The 16S rRNA gene sequence analysis also indicated that strain A-T 6646(T) belonged to the genus Actinoplanes, being most closely related to Actinoplanes liguriensis DSM 43865(T) (97.61 %) and Actinoplanes octamycinicus NBRC 14524(T) (97.52 %). The DNA-DNA relatedness values, which differentiate the new strain from the most closely related species, were significantly below 70 %. The cell-wall peptidoglycan contained meso-diaminopimelic acid. The whole-cell sugars contained xylose and arabinose. The predominant menaquinone was MK-9(H4). The diagnostic phospholipids were phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol. The predominant cellular fatty acids were iso-C16 : 0, anteiso-C17 : 0, iso-C15 : 0 and anteiso-C15 : 0. Following an evaluation of phenotypic, chemotaxonomic and genotypic studies, the isolate is proposed to represent a novel species to be named Actinoplanes siamensis sp. nov. The type strain is A-T 6646(T) (= BCC 46194(T) = NBRC 109076(T)).
Asunto(s)
Bambusa/microbiología , Micromonosporaceae/clasificación , Filogenia , Microbiología del Suelo , Técnicas de Tipificación Bacteriana , ADN Bacteriano/genética , Ácidos Grasos/análisis , Micromonosporaceae/genética , Micromonosporaceae/aislamiento & purificación , Datos de Secuencia Molecular , Hibridación de Ácido Nucleico , Peptidoglicano/análisis , Fosfolípidos/análisis , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN , Tailandia , Vitamina K 2/análogos & derivados , Vitamina K 2/análisisRESUMEN
Bambusa pervariabilis × Dendrocalamopisis grandis blight is caused by a toxin produced by the fungus Arthrinium phaeospermum. In this study, a toxin fraction (P1-2-2) with an estimated molecular mass of 31 kDa was purified from a culture filtrate of this fungus by ammonium sulfate precipitation, Sephadex G-50 gel chromatography, Q Sepharose Fast Flow anion exchange resin, and Sephadex G-75 chromatography. The N-terminal amino acid sequence (i.e., H(2)N-Gln-Val-Arg-Asp-Arg-Leu-Glu-Ser-Thr) determined by Edman degradation showed homology to known serine alkaline proteases. The purified protein was named AP-toxin. Effects of the purified protein toxin on total phenol, flavonoid, total nucleic acid, DNA, RNA, soluble protein, and soluble sugar content, as well as DNase and RNase activities and disease index, were analyzed in different bamboo varieties by the impregnation method. The toxin had a significant effect on each parameter tested. In addition, a significant correlation was observed among the metabolic index, treatment time, bamboo resistance, and disease index. These data suggest that AP-toxin plays an important role in mediating the phytotoxic activities of A. phaeospermum. This study also indicates that metabolic indices could reflect the resistance indices of hybrid bamboo to blight.
Asunto(s)
Ascomicetos/química , Bambusa/efectos de los fármacos , Micotoxinas/farmacología , Enfermedades de las Plantas/microbiología , Bambusa/inmunología , Bambusa/metabolismo , Bambusa/microbiología , Carbohidratos/análisis , Desoxirribonucleasas/efectos de los fármacos , Resistencia a la Enfermedad , Flavonoides/análisis , Proteínas Fúngicas/aislamiento & purificación , Proteínas Fúngicas/farmacología , Peso Molecular , Micotoxinas/aislamiento & purificación , Ácidos Nucleicos/análisis , Ácidos Nucleicos/efectos de los fármacos , Fenoles/análisis , Hojas de la Planta/efectos de los fármacos , Hojas de la Planta/inmunología , Hojas de la Planta/metabolismo , Hojas de la Planta/microbiología , Proteínas de Plantas/análisis , Proteínas de Plantas/efectos de los fármacos , Brotes de la Planta/efectos de los fármacos , Brotes de la Planta/inmunología , Brotes de la Planta/metabolismo , Brotes de la Planta/microbiología , Ribonucleasas/efectos de los fármacos , Análisis de Secuencia de ProteínaRESUMEN
Fungal endophytes in plant leaf mesophyll form mutually beneficial associations through carbon assimilation, synthesis of biologically active chemicals, and enhancement of aesthetic and nutritional value. Here, we compared community structure, diversity, and richness of endophytic fungi in the leaves of three bamboo species, including Phyllostachys edulis (MZ), Bambusa rigida (KZ), and Pleioblastus amarus (YT) via high-throughput Illumina sequencing. In total, 1070 operational taxonomic units (OTUs) were retrieved and classified into 7 phylum, 27 classes, 82 orders, 185 families, 310 genus, and 448 species. Dominant genera were Cladosporium, Trichomerium, Hannaella, Ascomycota, Sporobolomyces, Camptophora and Strelitziana. The highest fungal diversity was observed in Pleioblastus amarus, followed by Bambusa rigida, and Phyllostachys edulis. Comparatively, monopodial species Ph. edulis and sympodial B. rigida, mixed P. amarus revealed the highest richness of endophytic fungi. We retrieved a few biocontrol agents, Sarocladium and Paraconiothyrium, and unique Sporobolomyces, Camptophora, and Strelitziana genera. FUNGuild analysis revealed the surrounding environment (The annual average temperature is between 15 and 25 °C, and the relative humidity of the air is above 83% all year round) as a source of fungal accumulation in bamboo leaves and their pathogenic nature. Our results provide precise knowledge for better managing bamboo forests and pave the way for isolating secondary metabolites and potential bioactive compounds.
Asunto(s)
Ascomicetos , Bambusa , Basidiomycota , Micobioma , Humanos , Bambusa/microbiología , Bosques , Endófitos , HongosRESUMEN
Bamboo shoot as food has been used in traditional ways by the tribal community the world over. For enhancing its business potential, research on various aspects of bamboo shoot as food is being carried out in Japan, Taiwan, Thailand, and Asian countries and several products are available in the market. Bamboo shoots are used as a delicacy in human food, are a good source of dietary fiber, low in fat and calories. The research studies included in this review paper focus on post-harvest preservation of bamboo shoot. In view of the seasonal availability of bamboo shoot, the post-harvest preservation system for handling cynogenic toxicity in raw shoot while keeping nutrients intact and enhancement of shelf life of the value added products assume great significance for the business potential of this natural product. A yardstick of assessing the "Shelf life-Quality Matrix" developed in this review paper would give a new perspective of quality control in case of preservation of bamboo shoot. Also, knowledge gaps identified in this paper would give impetus to new academic and R&D activities, in turn generating an innovative job profile in the food industry as well as rural entrepreneurship.
Asunto(s)
Bambusa/química , Conservación de Alimentos/métodos , Brotes de la Planta/química , Pueblo Asiatico , Bambusa/efectos adversos , Bambusa/microbiología , Emprendimiento/economía , Contaminación de Alimentos/prevención & control , Embalaje de Alimentos , Conservación de Alimentos/economía , Conservación de Alimentos/instrumentación , Almacenamiento de Alimentos , Alimentos en Conserva/efectos adversos , Alimentos en Conserva/análisis , Alimentos en Conserva/economía , Alimentos en Conserva/microbiología , Glicósidos/análisis , Humanos , Nitrilos/análisis , Valor Nutritivo , Brotes de la Planta/efectos adversos , Brotes de la Planta/microbiología , Control de CalidadRESUMEN
A novel actinobacterium, designated strain BR-34(T), was isolated from rhizosphere soil of bamboo (Phyllostachys nigro var. henonis) sampled in Damyang, Korea. The strain was found to have morphological and chemotaxonomic characteristics typical of the genus Catenulispora. The strain contained iso-C(16 : 0) as the major fatty acid and MK-9(H(4)), MK-9(H(6)) and MK-9(H(8)) as major isoprenoid quinones. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain BR-34(T) formed a cluster separate from members of the genus Catenulispora and was related most closely to Catenulispora acidiphila ID139908(T) (97.4% similarity), Catenulispora rubra Aac-30(T) (97.3%), Catenulispora yoronensis TT N02-20(T) (97.3%) and Catenulispora subtropica TT 99-48(T) (97%). However, the level of DNA-DNA relatedness between strain BR-34(T) and C. acidiphila ID139908(T) was only 45.32%. Based on DNA-DNA relatedness, morphological and phenotypic data, strain BR-34(T) could be distinguished from the type strains of phylogenetically related species. It is therefore considered to represent a novel species of the genus Catenulispora, for which the name Catenulispora graminis sp. nov. is proposed. The type strain is BR-34(T) (=KACC 15070(T)=NBRC 107755(T)).
Asunto(s)
Actinomycetales/clasificación , Bambusa/microbiología , Filogenia , Microbiología del Suelo , Actinomycetales/genética , Actinomycetales/aislamiento & purificación , Técnicas de Tipificación Bacteriana , ADN Bacteriano/genética , Ácidos Grasos/análisis , Datos de Secuencia Molecular , Hibridación de Ácido Nucleico , Quinonas/análisis , ARN Ribosómico 16S/genética , República de Corea , Rizosfera , Análisis de Secuencia de ADNRESUMEN
A Gram-positive aerobic rod-shaped non-motile bacterium designated A23(T) was isolated from bamboo extract that had been used to remove odor and was characterized to determine its taxonomic position. 16S rRNA gene sequence analysis revealed that strain A23(T) belongs to the phylum Actinobacteria. The highest degree of sequence similarities was determined to be with Leucobacter salsicius M1-8(T) (96.7%), Leucobacter exalbidus K-540B(T) (96.4%), Leucobacter chromiireducens subsp. chromiireducens L-1(T) (96.4%), Leucobacter komagatae IFO 15245(T) (96.4%) and Leucobacter aerolatus Sj10(T) (96.4%). Chemotaxonomic data revealed that strain A23(T) possesses menaquinone MK11, and its cell wall peptidoglycan contained 2,4-diaminobutyric acid, alanine, glycine, glutamic acid and γ-aminobutyric acid. The polar lipid profile of strain A23(T) contained diphosphatidylglycerol, phosphatidylglycerol and an unknown glycolipid. The predominant fatty acids were iso-C(16:0) (31.5%), anteiso-C(15:0) (43.2%) and anteiso-C(17:0) (13.9%), all of which corroborated the assignment of the strain to the genus Leucobacter. Based on these data, A23(T) (=KEMC 551-022(T) = JCM 17538(T)) should be classified as the type strain for a novel Leucobacter species, for which the name Leucobacter margaritiformis sp. nov. is proposed.
Asunto(s)
Actinomycetales/aislamiento & purificación , Bambusa/microbiología , Extractos Vegetales/química , Actinomycetales/clasificación , Actinomycetales/genética , Actinomycetales/metabolismo , Técnicas de Tipificación Bacteriana , ADN Bacteriano/genética , ADN Ribosómico/genética , Ácidos Grasos/metabolismo , Datos de Secuencia Molecular , Filogenia , ARN Ribosómico 16S/genéticaRESUMEN
The natural biodiversity that is found in tropical areas offers countless biotechnological opportunities; especially if we take in account that many biomolecules from several microorganisms have supported for many years, different industrial applications in areas such as pharmacology, agro-industry, bioprocess, environmental technology, and bioconversion. In order to find new lignocellulolytic enzymes and evaluate bamboo fibers as substrate, Schizophyllum commune a fungus with broad distribution was isolated and grown during 15 days in liquid culture medium containing 1% lignocellulosic fibers from bamboo, banana stem, and sugarcane bagasse. The enzymatic activity of xylanase, mannanase, polygalacturonase, CMCase, FPase, and avicelase were evaluated. Sugarcane bagasse and banana stem showed to induce higher hollocellulase activity when compared with bamboo as the main carbon source. The physical mechanism that the fungus uses to degrade bamboo was observed not only in fibers naturally infected but also in healthy fibers that were treated and untreated with enzyme solution. SEM analysis showed the structural disruption and invasion of the vascular bundles, parenchyma cells, and parenchymatous tissues as a consequence of the presence of this fungus and the catalytic action of its enzymes into the plant tissue.
Asunto(s)
Bambusa/microbiología , Celulasa/metabolismo , Schizophyllum/enzimología , Bambusa/ultraestructura , Carbohidratos/análisis , Celulasa/análisis , Microscopía Electrónica de Rastreo , Schizophyllum/crecimiento & desarrolloRESUMEN
Twenty-seven Colletotrichum isolates associated with asymptomatic tissues of bamboo (Bambusoideae, Gramineae) were isolated from Anhui, Beijing, and Guangxi in China. Based on multilocus (internal transcribed spacer [ITS], glyceraldehyde-3-phosphate dehydrogenase [GAPDH], chitin synthase [CHS], actin [ACT], beta-tubulin [TUB2]) phylogenetic analyses and morphological characteristics, three species were distinguished, including two novel species, C. bambusicola and C. guangxiense, and one known species, C. metake, which is a first report for China. These species have hitherto only been discovered on Bambusoideae, indicating that they probably have host preference.
Asunto(s)
Bambusa/microbiología , Colletotrichum/clasificación , Colletotrichum/genética , ADN de Hongos/genética , Filogenia , China , Colletotrichum/aislamiento & purificación , Especificidad del Huésped , Enfermedades de las Plantas/microbiologíaRESUMEN
The endophytic fungus Aciculosporium take (Ascomycota; Clavicipitaceae) causes continuous shoot growth in bamboo. The colonized shoot eventually results in witches' broom formation but maintains normal leaf arrangement and branching pattern. To analyze the mechanism of well-regulated symptom development, the location of the fungal endophytic hyphae in host tissues was visualized. A colorimetric in situ hybridization technique using a species-specific oligonucleotide probe targeting the 18S rRNA of A. take was used. In situ hybridization was performed on tissue sections of diseased shoots with or without external signs of fungal colonization. Specific signals were detected in intercellular spaces of the bamboo tissues. Most signals were detected in the shoot apical meristem and the leaf primordia. In addition, fewer signals were detected in the lateral buds, juvenile leaves, and stems. These results indicate that A. take grows endophytically, particularly in the shoot apical meristem of the host. The location of A. take hyphae suggests that the mechanism of symptom development can be explained by the action of exogenous fungal auxin, which continuously induces primordium initiation within the host.
Asunto(s)
Bambusa/microbiología , Hypocreales/citología , Hypocreales/genética , Hibridación in Situ/métodos , Enfermedades de las Plantas/microbiología , Espacio Extracelular/microbiología , Hypocreales/aislamiento & purificación , Datos de Secuencia Molecular , Sondas de Oligonucleótidos/genética , Hojas de la Planta/microbiología , Brotes de la Planta/microbiología , ARN de Hongos/genética , ARN Ribosómico 18S/genética , Análisis de Secuencia de ADN , Coloración y Etiquetado/métodosRESUMEN
Three species of the anamorphic fungus Shrungabeeja were collected from tropical forests in Yunnan Province, southern China. S. melicopeae sp. nov. and S. begoniae sp. nov. are described and illustrated from specimens collected respectively on dead branches of Melicope triphylla and Begonia semperflorens. S. vadirajensis is recorded for the first time from China. A key to the three known species of Shrungabeeja is provided.
Asunto(s)
Ascomicetos/clasificación , Bambusa/microbiología , Ascomicetos/citología , China , Especificidad de la Especie , Esporas Fúngicas/citología , Árboles/microbiologíaRESUMEN
A new hypocrellin A-producing strain, Shiraia sp. SUPER-H168, was isolated from tissues of bamboo, Brachystachyum densiflorum. The morphology of this strain was characterized with a light microscope and a scanning electronic microscope. The mycelia, conidia, pycnidia of fungus were observed. Small pycnidia (10-20 microm in length) full of small conidia appeared on the mycelia, which were first reported in this study. The 18S rDNA region of this strain was amplified and sequenced. Then a neighbor-joining tree of 18S rDNA was constructed. According to the result of analysis, the strain SUPER-H168 was proved to belong to the genus Shiraia. Hypocrellin A was produced by solid-state fermentation, extracted by acetone, isolated by preparative RP-HPLC, and identified by RP-HPLC, ESI-MS and ultraviolet-visible absorbing scanning with diode array detection. The HA production could reach 2.02 mg/g dry solid substrate.